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The map label for this gene is ohrR [H]

Identifier: 15888187

GI number: 15888187

Start: 848202

End: 848660

Strand: Reverse

Name: ohrR [H]

Synonym: Atu0846

Alternate gene names: 15888187

Gene position: 848660-848202 (Counterclockwise)

Preceding gene: 159184498

Following gene: 159184493

Centisome position: 29.87

GC content: 61.87

Gene sequence:

>459_bases
ATGGACGCAGAGGGCAACGAGAAGACAATGGAAAGCCTGTTGAGGCTGGACCAGCAGATATGTTTTGCCCTTTACGGCGC
AGCGCATGCCTTTACCCGCGCCTATAAGCCGCTGCTCGACCCGATCGGGCTCACCTATCCGCAATATCTCGTCATGATGG
CGCTGTGGGAAAAGGAAACATCCACCGTCAAGGCGCTCGGCGAAATGCTGGGCCTCGATTCGGGCACGCTGTCGCCGCTT
CTCAAGAGGCTGGAGCATGCCGGTCTGATCACCCGCAAACGGGGCACGGTGGACGAGCGGCAGGTGCTGGTGGCGCTGAC
GCCTAAAGGCGCCGACCTCAAGAAAGAGGGTGTGAAGATCATGGCCGCCATCGGCGGCGCCACCGGCTGCGGGCTGGAGG
AACTGGCGCAGCTGCGCGATCAGGTGAATGCGCTGAAGGAAGGTCTCTCCCGGCCATAG

Upstream 100 bases:

>100_bases
TTTTGCGATAATTTTCAGGAAATTTCGCCGCGCATTCATGTGGCAGGAACCGAAAGCGGGGGCCGATTGTTCCCTCCCCG
GTTGATTTTGGAGCAGGAAA

Downstream 100 bases:

>100_bases
GCCGAAAAAGAGAAAGGCGGCACGAGGCCGCCTTTTTATGCGAGGAGTTTTCGGCTTACTGCCACACCACCACACGCGCC
TTCTGCGGCACGCGGTCGTA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDAEGNEKTMESLLRLDQQICFALYGAAHAFTRAYKPLLDPIGLTYPQYLVMMALWEKETSTVKALGEMLGLDSGTLSPL
LKRLEHAGLITRKRGTVDERQVLVALTPKGADLKKEGVKIMAAIGGATGCGLEELAQLRDQVNALKEGLSRP

Sequences:

>Translated_152_residues
MDAEGNEKTMESLLRLDQQICFALYGAAHAFTRAYKPLLDPIGLTYPQYLVMMALWEKETSTVKALGEMLGLDSGTLSPL
LKRLEHAGLITRKRGTVDERQVLVALTPKGADLKKEGVKIMAAIGGATGCGLEELAQLRDQVNALKEGLSRP
>Mature_152_residues
MDAEGNEKTMESLLRLDQQICFALYGAAHAFTRAYKPLLDPIGLTYPQYLVMMALWEKETSTVKALGEMLGLDSGTLSPL
LKRLEHAGLITRKRGTVDERQVLVALTPKGADLKKEGVKIMAAIGGATGCGLEELAQLRDQVNALKEGLSRP

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16542; Mature: 16542

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAEGNEKTMESLLRLDQQICFALYGAAHAFTRAYKPLLDPIGLTYPQYLVMMALWEKET
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
STVKALGEMLGLDSGTLSPLLKRLEHAGLITRKRGTVDERQVLVALTPKGADLKKEGVKI
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCEEEEEECCCCCCHHHHHHHH
MAAIGGATGCGLEELAQLRDQVNALKEGLSRP
HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDAEGNEKTMESLLRLDQQICFALYGAAHAFTRAYKPLLDPIGLTYPQYLVMMALWEKET
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
STVKALGEMLGLDSGTLSPLLKRLEHAGLITRKRGTVDERQVLVALTPKGADLKKEGVKI
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCEEEEEECCCCCCHHHHHHHH
MAAIGGATGCGLEELAQLRDQVNALKEGLSRP
HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]