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The map label for this gene is yfhP [C]

Identifier: 159184477

GI number: 159184477

Start: 817480

End: 817920

Strand: Direct

Name: yfhP [C]

Synonym: Atu0819

Alternate gene names: 159184477

Gene position: 817480-817920 (Clockwise)

Preceding gene: 15888156

Following gene: 159184478

Centisome position: 28.77

GC content: 60.32

Gene sequence:

>441_bases
ATGATTTCGCAGAAGGCAAAATATGCGCTGAGGGCGCTTCTTTCGCTGGCAAAGGCCGACGGCGGCTGTCCCGTGCAGAT
TTCCGACATTGCCCGCGAACAGGCCATTCCGAAAAAGTTTCTCGAACAGATCCTTCTCGAAATGAAGAAGGAACGGATCG
TCGAAAGCCGGCGCGGCAAGCAGGGCGGTTATCTTCTGGCGCGCCCGGCGTCAGACATCACCTTTGGCGAAGTGCTACGC
CTCATCGACGGGCCGCTTGCGCCCTTGCCCTGCCTGTCGCAGACCGCCTATCGCCGTTGTGAGGATTGCGATGGCGAAAA
GCAGTGCGAGATCCGCCACGTTTTCGCCCGCGTGGCCGATGCCACCCGCAACATCCTGTTCAACACCACCGTTGCCGATG
CGGTGGCGGGTGTCGAAGTGCCCGAGCTTTTGACGGCCTGA

Upstream 100 bases:

>100_bases
TGCCCGTTCACCTTCTTTGCAGCTTGGATTTGAATTGTGACAACTTCTGCGCTAAGCGGGAATTGCCGGGTATCCGGGCT
TGTGGTCTACTGGTTTTACG

Downstream 100 bases:

>100_bases
CGAAAAAATTGTCTAAAACCCCATAATATTTTTCGCCATCACGGCAAAAAATCGTCAAAAATGTGAAACGGTTTTGCATT
CAGCAAAGTTTTACACGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MISQKAKYALRALLSLAKADGGCPVQISDIAREQAIPKKFLEQILLEMKKERIVESRRGKQGGYLLARPASDITFGEVLR
LIDGPLAPLPCLSQTAYRRCEDCDGEKQCEIRHVFARVADATRNILFNTTVADAVAGVEVPELLTA

Sequences:

>Translated_146_residues
MISQKAKYALRALLSLAKADGGCPVQISDIAREQAIPKKFLEQILLEMKKERIVESRRGKQGGYLLARPASDITFGEVLR
LIDGPLAPLPCLSQTAYRRCEDCDGEKQCEIRHVFARVADATRNILFNTTVADAVAGVEVPELLTA
>Mature_146_residues
MISQKAKYALRALLSLAKADGGCPVQISDIAREQAIPKKFLEQILLEMKKERIVESRRGKQGGYLLARPASDITFGEVLR
LIDGPLAPLPCLSQTAYRRCEDCDGEKQCEIRHVFARVADATRNILFNTTVADAVAGVEVPELLTA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=82, Percent_Identity=39.0243902439024, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16055; Mature: 16055

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISQKAKYALRALLSLAKADGGCPVQISDIAREQAIPKKFLEQILLEMKKERIVESRRGK
CCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QGGYLLARPASDITFGEVLRLIDGPLAPLPCLSQTAYRRCEDCDGEKQCEIRHVFARVAD
CCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ATRNILFNTTVADAVAGVEVPELLTA
HHHHHHHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure
MISQKAKYALRALLSLAKADGGCPVQISDIAREQAIPKKFLEQILLEMKKERIVESRRGK
CCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QGGYLLARPASDITFGEVLRLIDGPLAPLPCLSQTAYRRCEDCDGEKQCEIRHVFARVAD
CCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ATRNILFNTTVADAVAGVEVPELLTA
HHHHHHHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]