Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888156
Identifier: 15888156
GI number: 15888156
Start: 813644
End: 813805
Strand: Direct
Name: 15888156
Synonym: Atu0815
Alternate gene names: NA
Gene position: 813644-813805 (Clockwise)
Preceding gene: 17934721
Following gene: 159184477
Centisome position: 28.63
GC content: 51.23
Gene sequence:
>162_bases GTGGTCATCAATTTGTCGCGATCAAAAAAGAGGCCCGCTGTTCTCTCGAACAACGAGCCTCTGTTGGGTCGCCTGGCGGA GCGACCGCGCGCAAATTCGCTTTTTGCACATGAACGTCAAATGAACGAACGGCTTTCCCAAAGACTGAGAAACAACCTGT AA
Upstream 100 bases:
>100_bases GGGGACGCGCGACATCTGAAAGTCTTAAAAGCCTCGATTCCGATCCACAACCTCAGAAGTTACCCGTCATCGCCTTGCGC CCCGAATTTCAGGGGCTGTC
Downstream 100 bases:
>100_bases AAATCAGGGGCTGATGGATCGGAAAGCGCGCTCAGCCGTTATCTATCCATAACAACAATGGAGGATAACATGCTGAAGGG TATTGCACTGTGGGCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MVINLSRSKKRPAVLSNNEPLLGRLAERPRANSLFAHERQMNERLSQRLRNNL
Sequences:
>Translated_53_residues MVINLSRSKKRPAVLSNNEPLLGRLAERPRANSLFAHERQMNERLSQRLRNNL >Mature_53_residues MVINLSRSKKRPAVLSNNEPLLGRLAERPRANSLFAHERQMNERLSQRLRNNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6196; Mature: 6196
Theoretical pI: Translated: 12.41; Mature: 12.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVINLSRSKKRPAVLSNNEPLLGRLAERPRANSLFAHERQMNERLSQRLRNNL CEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVINLSRSKKRPAVLSNNEPLLGRLAERPRANSLFAHERQMNERLSQRLRNNL CEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA