Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is gltP [H]
Identifier: 159184471
GI number: 159184471
Start: 805152
End: 806516
Strand: Reverse
Name: gltP [H]
Synonym: Atu0804
Alternate gene names: 159184471
Gene position: 806516-805152 (Counterclockwise)
Preceding gene: 159184473
Following gene: 15888145
Centisome position: 28.38
GC content: 62.12
Gene sequence:
>1365_bases ATGTCACAGGCAACGACGTCCGCCGGCTCCTCCGGGTCGAAACCCTTTTATCGCAATTTCGGCTTTCAGGTTCTGATTGC CATGGTCATCGGCCTGCTGCTCGGCCTTGTTGCCCGCAACATCGGCCCCGATGCAGCCGGCAATCCGAACTGGCTTTCGG TCACGCTGCAGACCATCGGCAGCATTTTCGTGCAGCTTTTGCGCGCGCTCGTACCGCCGCTGATCTTTACGGCTATCGTC GCTTCCATCGCCAATCTCAAGAATCTTTCCAATGCGGCAAAGCTCGTCTGGCAGACGCTTCTGTGGTTCGCCATCACCGC CCTGATCGCCGTGGTCATCGGCATCGTGCTCGGCCTCGTCATTCAGCCGGGCGTCAACACGGCAATTGCCAACACGGCAG CGGCGGCCCCTTCTTCCACCGGCTCCTGGCTGGATTTCCTGAAGGGTCTCGTTCCGGCCAACGTCTTCGGCCTTGAGGCG TCTACCAAAATCACCAACGGCGCCGGCAGCACCTCGCTGAACTTCAACGTGCTGCAGCTGCTCGTGGTTTCCATTGCTTT TGGTGTCGCAGCCCTCAAAGCCGGCAAGGCGGCGGAACCCTTCCTCGCCTTCAACCAGTCGCTGCTCGCCATCGTGCGTA AAATCCTGTGGTGGGTCATCCGCCTCACCCCCATCGGCACCATCGGCCTGCTCGGCCGCGCGGTTGACCAATATGGCTGG ACGACGCTGTCGCAGCTCGGCTGGTATGCGGCGGCCGTTTATATCGGTCTCGCGCTCGTGCTCTTCGTCGTCTATCCGGC GCTGCTTCTCGCCCATGGTCTGAAGCCTTCGCGGTTCTTTGCGGGCGCATGGCCGGCCATCCAGCTGGCCTTCGTGTCGC GCTCCTCCATCGGCACGCTGCCCGTCACCGAAACCGTGACGGAAAAGAGCCTTGGCGTGCCGCGCGAATATGCCGCCTTC TCCGTGCCGCTCGGCGCTACCACCAAGATGGATGGCTGCGCCGCGATCTATCCGGCAATCTCGGCGATCTTCATCGCGCA GTTCTTCCAGGTGCCGCTCGGCATTCAGGAATATGTGCTGATCGTCTTCGTGTCCGTGCTCGGTTCCGCCGCAACGGCGG GCCTTACAGGCGCGGTTGTGATGCTGACGTTGACGCTTTCCACGCTCGGCCTGCCGCTTGAAGGTGTCGGCCTGCTGCTC GCAATCGATCCGATCCTCGACATGGGCCGCACGGCGGTCAACGTCGCCGGCCAGGCACTGGTGCCCACCATCGTCGCCAA GCGCGAAGGCATTCTCAATGAGGCGGTTTATAACAACGCCAAGGATATCGACACGCTCGATGACCGTGAGGCCGTGACGG CCTGA
Upstream 100 bases:
>100_bases TTAATTGCTGAGGAAATCGGCGTATCCTCGGCGACCTCCCTCGAGAATGCGTGTAAAAAGTGCAACATTCTCGTTTTCTT GCACAATAAAGAGACAGATC
Downstream 100 bases:
>100_bases CGGAGAACTGGTCAAAAAGATACGGTGCGCTCCACTTCGAAGCGCACCGTAAATAACGTGCGCCACCCGGCTTCTCGCCA GAATATCCACATTTTTGACA
Product: proton/glutamate transport protein
Products: NA
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSQATTSAGSSGSKPFYRNFGFQVLIAMVIGLLLGLVARNIGPDAAGNPNWLSVTLQTIGSIFVQLLRALVPPLIFTAIV ASIANLKNLSNAAKLVWQTLLWFAITALIAVVIGIVLGLVIQPGVNTAIANTAAAAPSSTGSWLDFLKGLVPANVFGLEA STKITNGAGSTSLNFNVLQLLVVSIAFGVAALKAGKAAEPFLAFNQSLLAIVRKILWWVIRLTPIGTIGLLGRAVDQYGW TTLSQLGWYAAAVYIGLALVLFVVYPALLLAHGLKPSRFFAGAWPAIQLAFVSRSSIGTLPVTETVTEKSLGVPREYAAF SVPLGATTKMDGCAAIYPAISAIFIAQFFQVPLGIQEYVLIVFVSVLGSAATAGLTGAVVMLTLTLSTLGLPLEGVGLLL AIDPILDMGRTAVNVAGQALVPTIVAKREGILNEAVYNNAKDIDTLDDREAVTA
Sequences:
>Translated_454_residues MSQATTSAGSSGSKPFYRNFGFQVLIAMVIGLLLGLVARNIGPDAAGNPNWLSVTLQTIGSIFVQLLRALVPPLIFTAIV ASIANLKNLSNAAKLVWQTLLWFAITALIAVVIGIVLGLVIQPGVNTAIANTAAAAPSSTGSWLDFLKGLVPANVFGLEA STKITNGAGSTSLNFNVLQLLVVSIAFGVAALKAGKAAEPFLAFNQSLLAIVRKILWWVIRLTPIGTIGLLGRAVDQYGW TTLSQLGWYAAAVYIGLALVLFVVYPALLLAHGLKPSRFFAGAWPAIQLAFVSRSSIGTLPVTETVTEKSLGVPREYAAF SVPLGATTKMDGCAAIYPAISAIFIAQFFQVPLGIQEYVLIVFVSVLGSAATAGLTGAVVMLTLTLSTLGLPLEGVGLLL AIDPILDMGRTAVNVAGQALVPTIVAKREGILNEAVYNNAKDIDTLDDREAVTA >Mature_453_residues SQATTSAGSSGSKPFYRNFGFQVLIAMVIGLLLGLVARNIGPDAAGNPNWLSVTLQTIGSIFVQLLRALVPPLIFTAIVA SIANLKNLSNAAKLVWQTLLWFAITALIAVVIGIVLGLVIQPGVNTAIANTAAAAPSSTGSWLDFLKGLVPANVFGLEAS TKITNGAGSTSLNFNVLQLLVVSIAFGVAALKAGKAAEPFLAFNQSLLAIVRKILWWVIRLTPIGTIGLLGRAVDQYGWT TLSQLGWYAAAVYIGLALVLFVVYPALLLAHGLKPSRFFAGAWPAIQLAFVSRSSIGTLPVTETVTEKSLGVPREYAAFS VPLGATTKMDGCAAIYPAISAIFIAQFFQVPLGIQEYVLIVFVSVLGSAATAGLTGAVVMLTLTLSTLGLPLEGVGLLLA IDPILDMGRTAVNVAGQALVPTIVAKREGILNEAVYNNAKDIDTLDDREAVTA
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI66773030, Length=412, Percent_Identity=30.5825242718447, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI40254478, Length=506, Percent_Identity=29.0513833992095, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI4827012, Length=451, Percent_Identity=27.7161862527716, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI194239697, Length=473, Percent_Identity=26.4270613107822, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI5032093, Length=341, Percent_Identity=30.4985337243402, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI21314632, Length=397, Percent_Identity=27.9596977329975, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI223468566, Length=267, Percent_Identity=32.2097378277154, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI223468564, Length=254, Percent_Identity=33.0708661417323, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI169790839, Length=434, Percent_Identity=28.3410138248848, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI262359914, Length=372, Percent_Identity=27.4193548387097, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI301601644, Length=123, Percent_Identity=38.2113821138211, Blast_Score=76, Evalue=7e-14, Organism=Escherichia coli, GI1788024, Length=411, Percent_Identity=31.1435523114355, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1789947, Length=446, Percent_Identity=28.0269058295964, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1790514, Length=431, Percent_Identity=28.0742459396752, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1789473, Length=400, Percent_Identity=26.25, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71996953, Length=469, Percent_Identity=29.8507462686567, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17537407, Length=417, Percent_Identity=29.7362110311751, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI71983106, Length=437, Percent_Identity=29.9771167048055, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI71983099, Length=437, Percent_Identity=29.9771167048055, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI193206505, Length=413, Percent_Identity=29.0556900726392, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17541374, Length=427, Percent_Identity=28.3372365339578, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI193206654, Length=465, Percent_Identity=24.5161290322581, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24583025, Length=456, Percent_Identity=26.3157894736842, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI17137668, Length=456, Percent_Identity=26.3157894736842, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24583023, Length=456, Percent_Identity=26.3157894736842, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI281360481, Length=434, Percent_Identity=25.5760368663594, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI281360483, Length=434, Percent_Identity=25.5760368663594, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI17137666, Length=434, Percent_Identity=25.5760368663594, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 47429; Mature: 47298
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQATTSAGSSGSKPFYRNFGFQVLIAMVIGLLLGLVARNIGPDAAGNPNWLSVTLQTIG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH SIFVQLLRALVPPLIFTAIVASIANLKNLSNAAKLVWQTLLWFAITALIAVVIGIVLGLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQPGVNTAIANTAAAAPSSTGSWLDFLKGLVPANVFGLEASTKITNGAGSTSLNFNVLQL HCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHH LVVSIAFGVAALKAGKAAEPFLAFNQSLLAIVRKILWWVIRLTPIGTIGLLGRAVDQYGW HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCH TTLSQLGWYAAAVYIGLALVLFVVYPALLLAHGLKPSRFFAGAWPAIQLAFVSRSSIGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCCCCCC PVTETVTEKSLGVPREYAAFSVPLGATTKMDGCAAIYPAISAIFIAQFFQVPLGIQEYVL CCHHHHHHHHCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVFVSVLGSAATAGLTGAVVMLTLTLSTLGLPLEGVGLLLAIDPILDMGRTAVNVAGQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCHHH VPTIVAKREGILNEAVYNNAKDIDTLDDREAVTA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC >Mature Secondary Structure SQATTSAGSSGSKPFYRNFGFQVLIAMVIGLLLGLVARNIGPDAAGNPNWLSVTLQTIG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH SIFVQLLRALVPPLIFTAIVASIANLKNLSNAAKLVWQTLLWFAITALIAVVIGIVLGLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQPGVNTAIANTAAAAPSSTGSWLDFLKGLVPANVFGLEASTKITNGAGSTSLNFNVLQL HCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHH LVVSIAFGVAALKAGKAAEPFLAFNQSLLAIVRKILWWVIRLTPIGTIGLLGRAVDQYGW HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCH TTLSQLGWYAAAVYIGLALVLFVVYPALLLAHGLKPSRFFAGAWPAIQLAFVSRSSIGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCCCCCC PVTETVTEKSLGVPREYAAFSVPLGATTKMDGCAAIYPAISAIFIAQFFQVPLGIQEYVL CCHHHHHHHHCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVFVSVLGSAATAGLTGAVVMLTLTLSTLGLPLEGVGLLLAIDPILDMGRTAVNVAGQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCHHH VPTIVAKREGILNEAVYNNAKDIDTLDDREAVTA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7751298; 9384377 [H]