Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184463
Identifier: 159184463
GI number: 159184463
Start: 778210
End: 779415
Strand: Direct
Name: 159184463
Synonym: Atu0783
Alternate gene names: NA
Gene position: 778210-779415 (Clockwise)
Preceding gene: 15888125
Following gene: 15888131
Centisome position: 27.39
GC content: 61.53
Gene sequence:
>1206_bases ATGTGTTATGGCACATGCGCTCTTGTCGTGCGTGGGCCAAGGCTGACACGTTCGTCATGCCGGTATCTTATGTCTGCCTT TCCTCCTCCGACCATTGCAAGGGTGTCACCCGTGAAGCTTTTCTCCTGCGCGTCCTGCGGCCAACCTGTTCATTTCGACA ATCGCTTCTGTGTCGCCTGCGGCCACCGTCTGGCCTTCGTGCCGGAACGGCTGTCCATGGAAGCGCTCGCACCTGCGGGT GAACCGAACTGGCAGATCATCGCGGAGCCGGATAGGCAGGTGCGGTTCTGCGCCAATGAGGTGAACGATATCTGCAACTG GTCGGTGCCGGCGGAAAGCGCCAGCGCCTTTTGCCCGGCCTGTAGCCATAATCGCCTGGTGCCAGACATTGCAACGGAAG AGGGGATCGAGCAGTGGCGCGGCATCAGCCAGGCCCAGCGGCACCTGTTTTATTCGATCCTGAAGCTTGGCCTGCCGCAT CCCAACCGTGATGCTGATCCCGCCGGCGGTCTCGTTTTTGACTTTCTGGTGGATGAGGTGGCACCCGATGGCTCCATCAT TCCCGCCATGACCGGTCACGACGAAGGCCTGATCGCCATTCGCGCCGCAGAGGCCGATGATGCGACGCGCGAACAGGTAC GCGCCAATATGAATGAGCCCTATCGCACCATGCTCGGCCATTTCCGCCACGAGGTCGGGCATTTTATCTGGAACAAGCTG GTGCGGGACGCGAACCGGCTGGAAGCCTGCCGCGCCGTTTTCGGCGACGAGCGCGAGGATTACGCTGCCGCCCTGCAGCG CAATTACGAGGGCGGGCCGCGACCAGACTGGCAGGAGAATTTCATCAGCTCCTATGCCTCGGTCCACCCATGGGAGGATT TCGCCGAATGTTTTGCCCATTATCTGCATATCGTCGATACGCTGGAGACGGCGCGCGCCTTCGGTGTGGCGATAGACCCC GACGGACATGAGGAAATGGCGGCGGAGGTGACCTTCGATCCCTATAGGGCCCGCAGTGCCGCACAGCTGGTCAAGGCCTG GATTCCGCTCAGCGTCGCCATCAATTCCATTCAGCGTAGCATGGGGGAGGCGGACCTTTATCCCTTCGTGCTGACGCCGC CGGTGGTGGCGAAGATGGAGTTCGTTCACGACCTCCTGCATGGGACGGTGGCGGCGGACGCGCCGCAGATGGCGATGGGT CAGTGA
Upstream 100 bases:
>100_bases TTCTGTCGGCAAGGCGAAGGATGCCGTCAAGGGCGCCGTCGACCGCATGTAATATTGCATGAATTGATGCGCCCCTCCCA CAACAGGGCGCGTGGAGCGC
Downstream 100 bases:
>100_bases TCGTTTGGCGAGAAATCCAAGACTTTTGAGGAGAAGGAATAATCTCTCCTCCGTCATCCTCGGGCTTGTCCCGAGGATCT GCCAATGGTCATTTTAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MCYGTCALVVRGPRLTRSSCRYLMSAFPPPTIARVSPVKLFSCASCGQPVHFDNRFCVACGHRLAFVPERLSMEALAPAG EPNWQIIAEPDRQVRFCANEVNDICNWSVPAESASAFCPACSHNRLVPDIATEEGIEQWRGISQAQRHLFYSILKLGLPH PNRDADPAGGLVFDFLVDEVAPDGSIIPAMTGHDEGLIAIRAAEADDATREQVRANMNEPYRTMLGHFRHEVGHFIWNKL VRDANRLEACRAVFGDEREDYAAALQRNYEGGPRPDWQENFISSYASVHPWEDFAECFAHYLHIVDTLETARAFGVAIDP DGHEEMAAEVTFDPYRARSAAQLVKAWIPLSVAINSIQRSMGEADLYPFVLTPPVVAKMEFVHDLLHGTVAADAPQMAMG Q
Sequences:
>Translated_401_residues MCYGTCALVVRGPRLTRSSCRYLMSAFPPPTIARVSPVKLFSCASCGQPVHFDNRFCVACGHRLAFVPERLSMEALAPAG EPNWQIIAEPDRQVRFCANEVNDICNWSVPAESASAFCPACSHNRLVPDIATEEGIEQWRGISQAQRHLFYSILKLGLPH PNRDADPAGGLVFDFLVDEVAPDGSIIPAMTGHDEGLIAIRAAEADDATREQVRANMNEPYRTMLGHFRHEVGHFIWNKL VRDANRLEACRAVFGDEREDYAAALQRNYEGGPRPDWQENFISSYASVHPWEDFAECFAHYLHIVDTLETARAFGVAIDP DGHEEMAAEVTFDPYRARSAAQLVKAWIPLSVAINSIQRSMGEADLYPFVLTPPVVAKMEFVHDLLHGTVAADAPQMAMG Q >Mature_401_residues MCYGTCALVVRGPRLTRSSCRYLMSAFPPPTIARVSPVKLFSCASCGQPVHFDNRFCVACGHRLAFVPERLSMEALAPAG EPNWQIIAEPDRQVRFCANEVNDICNWSVPAESASAFCPACSHNRLVPDIATEEGIEQWRGISQAQRHLFYSILKLGLPH PNRDADPAGGLVFDFLVDEVAPDGSIIPAMTGHDEGLIAIRAAEADDATREQVRANMNEPYRTMLGHFRHEVGHFIWNKL VRDANRLEACRAVFGDEREDYAAALQRNYEGGPRPDWQENFISSYASVHPWEDFAECFAHYLHIVDTLETARAFGVAIDP DGHEEMAAEVTFDPYRARSAAQLVKAWIPLSVAINSIQRSMGEADLYPFVLTPPVVAKMEFVHDLLHGTVAADAPQMAMG Q
Specific function: Unknown
COG id: COG4307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011201 [H]
Pfam domain/function: PF10005 DUF2248 [H]
EC number: NA
Molecular weight: Translated: 44496; Mature: 44496
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCYGTCALVVRGPRLTRSSCRYLMSAFPPPTIARVSPVKLFSCASCGQPVHFDNRFCVAC CCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEC GHRLAFVPERLSMEALAPAGEPNWQIIAEPDRQVRFCANEVNDICNWSVPAESASAFCPA CCHHHCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCC CSHNRLVPDIATEEGIEQWRGISQAQRHLFYSILKLGLPHPNRDADPAGGLVFDFLVDEV CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH APDGSIIPAMTGHDEGLIAIRAAEADDATREQVRANMNEPYRTMLGHFRHEVGHFIWNKL CCCCCEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VRDANRLEACRAVFGDEREDYAAALQRNYEGGPRPDWQENFISSYASVHPWEDFAECFAH HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH YLHIVDTLETARAFGVAIDPDGHEEMAAEVTFDPYRARSAAQLVKAWIPLSVAINSIQRS HHHHHHHHHHHHHHCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MGEADLYPFVLTPPVVAKMEFVHDLLHGTVAADAPQMAMGQ CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MCYGTCALVVRGPRLTRSSCRYLMSAFPPPTIARVSPVKLFSCASCGQPVHFDNRFCVAC CCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEC GHRLAFVPERLSMEALAPAGEPNWQIIAEPDRQVRFCANEVNDICNWSVPAESASAFCPA CCHHHCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCC CSHNRLVPDIATEEGIEQWRGISQAQRHLFYSILKLGLPHPNRDADPAGGLVFDFLVDEV CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH APDGSIIPAMTGHDEGLIAIRAAEADDATREQVRANMNEPYRTMLGHFRHEVGHFIWNKL CCCCCEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VRDANRLEACRAVFGDEREDYAAALQRNYEGGPRPDWQENFISSYASVHPWEDFAECFAH HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH YLHIVDTLETARAFGVAIDPDGHEEMAAEVTFDPYRARSAAQLVKAWIPLSVAINSIQRS HHHHHHHHHHHHHHCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MGEADLYPFVLTPPVVAKMEFVHDLLHGTVAADAPQMAMGQ CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]