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The map label for this gene is 15888125

Identifier: 15888125

GI number: 15888125

Start: 777970

End: 778161

Strand: Direct

Name: 15888125

Synonym: Atu0782

Alternate gene names: NA

Gene position: 777970-778161 (Clockwise)

Preceding gene: 159184462

Following gene: 159184463

Centisome position: 27.38

GC content: 57.29

Gene sequence:

>192_bases
ATGGGTAGCACATCTGACAAGATCGCCGGTAAAACCAATGAAGTTGCCGGCAAGGTGAAGAAGAACGTCGGCGAAGCGAC
GGGCAATAATGAATTGCGCGCCAAGGGTGCCGCCCAGGAAACCAAGGGCAAGGTGCAGACTTCTGTCGGCAAGGCGAAGG
ATGCCGTCAAGGGCGCCGTCGACCGCATGTAA

Upstream 100 bases:

>100_bases
TTTGTTCTCGATTGTTTTTTGCTGGAACCAAATCCTGATCCCTGACGTTACTCACCCGGAAAGCCGAACAGAAAGTACGG
CTTAACTAGGGAGAAGTAAA

Downstream 100 bases:

>100_bases
TATTGCATGAATTGATGCGCCCCTCCCACAACAGGGCGCGTGGAGCGCATGTGTTATGGCACATGCGCTCTTGTCGTGCG
TGGGCCAAGGCTGACACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MGSTSDKIAGKTNEVAGKVKKNVGEATGNNELRAKGAAQETKGKVQTSVGKAKDAVKGAVDRM

Sequences:

>Translated_63_residues
MGSTSDKIAGKTNEVAGKVKKNVGEATGNNELRAKGAAQETKGKVQTSVGKAKDAVKGAVDRM
>Mature_62_residues
GSTSDKIAGKTNEVAGKVKKNVGEATGNNELRAKGAAQETKGKVQTSVGKAKDAVKGAVDRM

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y782_AGRT5 (Q8UHA1)

Other databases:

- EMBL:   AE007869
- PIR:   AH2672
- PIR:   F97454
- RefSeq:   NP_353806.1
- ProteinModelPortal:   Q8UHA1
- SMR:   Q8UHA1
- STRING:   Q8UHA1
- GeneID:   1132820
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0782
- eggNOG:   COG3237
- HOGENOM:   HBG704474
- OMA:   IKGTANE
- BioCyc:   ATUM176299-1:ATU0782-MONOMER
- InterPro:   IPR008462
- Gene3D:   G3DSA:1.10.1470.10

Pfam domain/function: PF05532 CsbD; SSF69047 CsbD

EC number: NA

Molecular weight: Translated: 6417; Mature: 6286

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSTSDKIAGKTNEVAGKVKKNVGEATGNNELRAKGAAQETKGKVQTSVGKAKDAVKGAV
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DRM
CCC
>Mature Secondary Structure 
GSTSDKIAGKTNEVAGKVKKNVGEATGNNELRAKGAAQETKGKVQTSVGKAKDAVKGAV
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DRM
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194