Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184446
Identifier: 159184446
GI number: 159184446
Start: 741430
End: 742224
Strand: Reverse
Name: 159184446
Synonym: Atu0743
Alternate gene names: NA
Gene position: 742224-741430 (Counterclockwise)
Preceding gene: 15888088
Following gene: 159185406
Centisome position: 26.12
GC content: 63.14
Gene sequence:
>795_bases ATGACACATCATCGCGAACATGTCGGCCAGGTGCTGAAAGAATGGCGAGCCCGCCGCAGGCTGAGCCAGCTCGATCTGGC GATAGAGGCGGACATATCGGCGCGCCATCTGAGCTTCGTGGAAAGCGGGCGTTCATCCCCCAGCCGCGAGATGCTCGCGA AACTGGCGGAGCAGCTTTCCATGCCCGCCCGCGCCGCCAACCGGCTGATGCTGGCGGCGGGTTATGCACCTGTTCATTCT GAACGGTCACTGGATGCACCTGACATGGCGGCAGCCCGGCAAGCCGTCGAAACCGTGGTGCATGGGCACATGCCCTTCCC CGCCCTTGCCGTCGACCGGCACTGGAACGTGGTTCTCGCCAATGATGCGATCACATCGCTGCTCGCCGGCGTTTCCGCCG AGCTGCTTCAGTCGCCGCTCAATGCCTTGCGGCTGAGCCTACATCCCGACGGCCTGAGTTCCCGCATCGTCAACCTTGCC GAATGGCGGCACCACCTGCTGGAGCGGTTGAAACGCCAGGTGGAAGAAACCGGAGACGACGTGCTTTCCCGCGTGTATGC GGAGCTTGCGTCCTATCCCGCACCGAAGCTTTCTGCCCATGCCGACGGGGCCGATCCGCTGGCGATACCGCTCCAGCTTC GTGATCCGTCTTCGGGCGCTACCCTCAGCTTCATTTCAACCACCACGGTTTTCGGTACCGCGACCGATGTCACACTGTCC GAACTGGTGCTGGAATGTTTCTACCCCGCCGATGCGGCAACCCGCGCGGCCCTGATGCAAGGCACCCAGGAGTAA
Upstream 100 bases:
>100_bases CTCCTTCTGGTTGACGGCCCAAACATGCCGGCGGTCGGGAAGCGGAACAATTACCTCAGAGGTAATCGCATTGGCGATGT CTTCTGCTAGGCTGCGGGAC
Downstream 100 bases:
>100_bases GACCCGTGCACACCACCTATCTCATCGGCTTTCAGGTGCGCCCCGGCCAGCGCGAGCGTTTTCTCGAATTGCTGAACGCG CTGCTCGACGCCATGCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Transcriptional Regulatory Protein; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Xre Family
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTHHREHVGQVLKEWRARRRLSQLDLAIEADISARHLSFVESGRSSPSREMLAKLAEQLSMPARAANRLMLAAGYAPVHS ERSLDAPDMAAARQAVETVVHGHMPFPALAVDRHWNVVLANDAITSLLAGVSAELLQSPLNALRLSLHPDGLSSRIVNLA EWRHHLLERLKRQVEETGDDVLSRVYAELASYPAPKLSAHADGADPLAIPLQLRDPSSGATLSFISTTTVFGTATDVTLS ELVLECFYPADAATRAALMQGTQE
Sequences:
>Translated_264_residues MTHHREHVGQVLKEWRARRRLSQLDLAIEADISARHLSFVESGRSSPSREMLAKLAEQLSMPARAANRLMLAAGYAPVHS ERSLDAPDMAAARQAVETVVHGHMPFPALAVDRHWNVVLANDAITSLLAGVSAELLQSPLNALRLSLHPDGLSSRIVNLA EWRHHLLERLKRQVEETGDDVLSRVYAELASYPAPKLSAHADGADPLAIPLQLRDPSSGATLSFISTTTVFGTATDVTLS ELVLECFYPADAATRAALMQGTQE >Mature_263_residues THHREHVGQVLKEWRARRRLSQLDLAIEADISARHLSFVESGRSSPSREMLAKLAEQLSMPARAANRLMLAAGYAPVHSE RSLDAPDMAAARQAVETVVHGHMPFPALAVDRHWNVVLANDAITSLLAGVSAELLQSPLNALRLSLHPDGLSSRIVNLAE WRHHLLERLKRQVEETGDDVLSRVYAELASYPAPKLSAHADGADPLAIPLQLRDPSSGATLSFISTTTVFGTATDVTLSE LVLECFYPADAATRAALMQGTQE
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28769; Mature: 28638
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHHREHVGQVLKEWRARRRLSQLDLAIEADISARHLSFVESGRSSPSREMLAKLAEQLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHC MPARAANRLMLAAGYAPVHSERSLDAPDMAAARQAVETVVHGHMPFPALAVDRHWNVVLA CCHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEE NDAITSLLAGVSAELLQSPLNALRLSLHPDGLSSRIVNLAEWRHHLLERLKRQVEETGDD HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLSRVYAELASYPAPKLSAHADGADPLAIPLQLRDPSSGATLSFISTTTVFGTATDVTLS HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEHHHHHCCCHHHHHH ELVLECFYPADAATRAALMQGTQE HHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure THHREHVGQVLKEWRARRRLSQLDLAIEADISARHLSFVESGRSSPSREMLAKLAEQLS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHC MPARAANRLMLAAGYAPVHSERSLDAPDMAAARQAVETVVHGHMPFPALAVDRHWNVVLA CCHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEE NDAITSLLAGVSAELLQSPLNALRLSLHPDGLSSRIVNLAEWRHHLLERLKRQVEETGDD HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLSRVYAELASYPAPKLSAHADGADPLAIPLQLRDPSSGATLSFISTTTVFGTATDVTLS HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEHHHHHCCCHHHHHH ELVLECFYPADAATRAALMQGTQE HHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA