Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is mrp [H]
Identifier: 159184430
GI number: 159184430
Start: 709245
End: 710411
Strand: Direct
Name: mrp [H]
Synonym: Atu0709
Alternate gene names: 159184430
Gene position: 709245-710411 (Clockwise)
Preceding gene: 159184429
Following gene: 15888054
Centisome position: 24.96
GC content: 64.87
Gene sequence:
>1167_bases ATGGCAGAGGTCAGCAAGAACCAGGTCGAAAAGGCGCTGGAAACGGTGATCTATCCCGGCAGCGGCAAGAACATCGTCGC GCTCGGCATGGTCTCGGAAATCTTCATCGCCGACGCGAAGGCCTATTTCTCCATCACCGTTCCGGCCGACAAGGCCTCTG AAATGGAACCTCTGCGGCTTGCAGCCGAACGGGCGGCCAAAAGCGTGGAAGGCATTGCCGGCGCGGTCGTTGCGCTGACG GCCGATCGCAAACCCGGCCAGCAGCAGCCCGCCCCCGCAGGTCCCACCCCCGCGCGTCCCGCCGCAGCAACCGGCCGGCC CGCCGCCGCGCCCGGTCGGCCGACACCGCAGCCGGGCTCGTCCAAGGTGGGCGTGCCGGGCGTCCGCGCCATCATCGCCG TGGCGTCGGGCAAGGGTGGCGTCGGCAAATCAACGACGGCCGTCAATCTGGCGCTTGGTCTGCAGGCGCTCGGCCTCAAG GTCGGCATGCTCGATGCCGATATTTACGGCCCCTCGCTGCCGCGGCTCTTGAAAATCTCCGGCCGTCCGAAGCAGCAGGA AGATCGCATCATCCTTCCCATGGAGAATTACGGACTGAAGGTCATGTCCATGGGCTTTCTGGTGGATGAGGAAGCTGCGA TGATCTGGCGCGGGCCGATGGTGCAGTCTGCCCTGATGCAGATGTTGCGCGAGGTGGCCTGGGGTGAACTCGATGTGCTG GTGCTCGACATGCCGCCCGGCACGGGCGATGCCCAGCTTACCATCGCCCAGCAGGTGCCGCTTGCCGGTGCGGTCATCGT CTCCACGCCGCAGGACCTGGCGCTGCTCGATGCGCGCAAGGGTATCACCATGTTCCGGAAGGTGGAGGTGCCGCTGCTCG GCGTCATCGAGAATATGAGCTATTTCATCGCACCGGATACTGGTGCGCGCTACGATATTTTCGGCCATGGCGGCGCCAAG GCGGAAGCGGAGAGGATCGGCGTGCCGTTTCTCGGCGAAGTGCCGCTCACCATCTCCATCCGTGAAATGTCGGATGCCGG AACCCCGGTCGTCGTCGCCGAGCCGGATGGCCCGCAGGCCGCGATCTACCGCGAGATCGCGGAAAAAGTCTGGGCGCGGA TGGGTGCTGACGAGAGAAAAGCCGCGCCGAAGATCGTTTTCGAATAG
Upstream 100 bases:
>100_bases CGTCGCGAATACCTGCCGCCTGCGCTTTGGCATTGGCGAAGCGCTCCGGCTTGGCTATGGATGCACGCAATACCCTGGAA TGATGTAGCGGAGGATGAAC
Downstream 100 bases:
>100_bases AGCGGTATGCCCCCGGTGCAAATGGATGTGCGTCGGCGGGCTCCGAATAGTCCTTTTAAAACAGAAGATTAATCGCCAGT ATCGGGCATGTTTTCGGGGT
Product: mrp protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MAEVSKNQVEKALETVIYPGSGKNIVALGMVSEIFIADAKAYFSITVPADKASEMEPLRLAAERAAKSVEGIAGAVVALT ADRKPGQQQPAPAGPTPARPAAATGRPAAAPGRPTPQPGSSKVGVPGVRAIIAVASGKGGVGKSTTAVNLALGLQALGLK VGMLDADIYGPSLPRLLKISGRPKQQEDRIILPMENYGLKVMSMGFLVDEEAAMIWRGPMVQSALMQMLREVAWGELDVL VLDMPPGTGDAQLTIAQQVPLAGAVIVSTPQDLALLDARKGITMFRKVEVPLLGVIENMSYFIAPDTGARYDIFGHGGAK AEAERIGVPFLGEVPLTISIREMSDAGTPVVVAEPDGPQAAIYREIAEKVWARMGADERKAAPKIVFE
Sequences:
>Translated_388_residues MAEVSKNQVEKALETVIYPGSGKNIVALGMVSEIFIADAKAYFSITVPADKASEMEPLRLAAERAAKSVEGIAGAVVALT ADRKPGQQQPAPAGPTPARPAAATGRPAAAPGRPTPQPGSSKVGVPGVRAIIAVASGKGGVGKSTTAVNLALGLQALGLK VGMLDADIYGPSLPRLLKISGRPKQQEDRIILPMENYGLKVMSMGFLVDEEAAMIWRGPMVQSALMQMLREVAWGELDVL VLDMPPGTGDAQLTIAQQVPLAGAVIVSTPQDLALLDARKGITMFRKVEVPLLGVIENMSYFIAPDTGARYDIFGHGGAK AEAERIGVPFLGEVPLTISIREMSDAGTPVVVAEPDGPQAAIYREIAEKVWARMGADERKAAPKIVFE >Mature_387_residues AEVSKNQVEKALETVIYPGSGKNIVALGMVSEIFIADAKAYFSITVPADKASEMEPLRLAAERAAKSVEGIAGAVVALTA DRKPGQQQPAPAGPTPARPAAATGRPAAAPGRPTPQPGSSKVGVPGVRAIIAVASGKGGVGKSTTAVNLALGLQALGLKV GMLDADIYGPSLPRLLKISGRPKQQEDRIILPMENYGLKVMSMGFLVDEEAAMIWRGPMVQSALMQMLREVAWGELDVLV LDMPPGTGDAQLTIAQQVPLAGAVIVSTPQDLALLDARKGITMFRKVEVPLLGVIENMSYFIAPDTGARYDIFGHGGAKA EAERIGVPFLGEVPLTISIREMSDAGTPVVVAEPDGPQAAIYREIAEKVWARMGADERKAAPKIVFE
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=252, Percent_Identity=51.1904761904762, Blast_Score=269, Evalue=3e-72, Organism=Homo sapiens, GI6912540, Length=252, Percent_Identity=41.6666666666667, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI118572611, Length=308, Percent_Identity=37.3376623376623, Blast_Score=189, Evalue=4e-48, Organism=Escherichia coli, GI87082045, Length=252, Percent_Identity=56.3492063492063, Blast_Score=281, Evalue=5e-77, Organism=Caenorhabditis elegans, GI25143050, Length=256, Percent_Identity=37.5, Blast_Score=165, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6322188, Length=236, Percent_Identity=41.1016949152542, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321347, Length=253, Percent_Identity=36.7588932806324, Blast_Score=161, Evalue=2e-40, Organism=Drosophila melanogaster, GI221511043, Length=261, Percent_Identity=40.9961685823755, Blast_Score=221, Evalue=6e-58, Organism=Drosophila melanogaster, GI24667611, Length=250, Percent_Identity=41.6, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI19921440, Length=290, Percent_Identity=35.8620689655172, Blast_Score=142, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 40701; Mature: 40570
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVSKNQVEKALETVIYPGSGKNIVALGMVSEIFIADAKAYFSITVPADKASEMEPLRL CCCCCHHHHHHHHHHEEECCCCCCEEEEEHHHHHHEECCEEEEEEEECCCCCCCCCHHHH AAERAAKSVEGIAGAVVALTADRKPGQQQPAPAGPTPARPAAATGRPAAAPGRPTPQPGS HHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SKVGVPGVRAIIAVASGKGGVGKSTTAVNLALGLQALGLKVGMLDADIYGPSLPRLLKIS CCCCCCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHCEEEEEEECCCCCCCCCCEEEEC GRPKQQEDRIILPMENYGLKVMSMGFLVDEEAAMIWRGPMVQSALMQMLREVAWGELDVL CCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCEEECCHHHHHHHHHHHHHHCCCCEEEE VLDMPPGTGDAQLTIAQQVPLAGAVIVSTPQDLALLDARKGITMFRKVEVPLLGVIENMS EEECCCCCCCCEEEEEECCCCCCEEEEECCCCCEEHHHHCCCEEEEEECCCHHHHCCCCE YFIAPDTGARYDIFGHGGAKAEAERIGVPFLGEVPLTISIREMSDAGTPVVVAEPDGPQA EEEECCCCCEEEEEECCCCCCHHHHCCCCEECCCCEEEEEEECCCCCCEEEEECCCCCHH AIYREIAEKVWARMGADERKAAPKIVFE HHHHHHHHHHHHHCCCCHHHCCCCEECC >Mature Secondary Structure AEVSKNQVEKALETVIYPGSGKNIVALGMVSEIFIADAKAYFSITVPADKASEMEPLRL CCCCHHHHHHHHHHEEECCCCCCEEEEEHHHHHHEECCEEEEEEEECCCCCCCCCHHHH AAERAAKSVEGIAGAVVALTADRKPGQQQPAPAGPTPARPAAATGRPAAAPGRPTPQPGS HHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SKVGVPGVRAIIAVASGKGGVGKSTTAVNLALGLQALGLKVGMLDADIYGPSLPRLLKIS CCCCCCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHCEEEEEEECCCCCCCCCCEEEEC GRPKQQEDRIILPMENYGLKVMSMGFLVDEEAAMIWRGPMVQSALMQMLREVAWGELDVL CCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCEEECCHHHHHHHHHHHHHHCCCCEEEE VLDMPPGTGDAQLTIAQQVPLAGAVIVSTPQDLALLDARKGITMFRKVEVPLLGVIENMS EEECCCCCCCCEEEEEECCCCCCEEEEECCCCCEEHHHHCCCEEEEEECCCHHHHCCCCE YFIAPDTGARYDIFGHGGAKAEAERIGVPFLGEVPLTISIREMSDAGTPVVVAEPDGPQA EEEECCCCCEEEEEECCCCCCHHHHCCCCEECCCCEEEEEEECCCCCCEEEEECCCCCHH AIYREIAEKVWARMGADERKAAPKIVFE HHHHHHHHHHHHHCCCCHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]