Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yhiN [H]
Identifier: 159184384
GI number: 159184384
Start: 590323
End: 591507
Strand: Direct
Name: yhiN [H]
Synonym: Atu0603
Alternate gene names: 159184384
Gene position: 590323-591507 (Clockwise)
Preceding gene: 15887941
Following gene: 15887950
Centisome position: 20.77
GC content: 60.68
Gene sequence:
>1185_bases ATGATGACAGAGAAATGTGACGTGCTGATTTTGGGGGCGGGCGCCGCCGGCATGATGGGCGCCATCCGCGCCGGAAAGCG TGGCCGCTCCGTCATCATTCTCGACCATGCCAGGGCACCGGGCGAAAAGATCCGTATTTCCGGCGGCGGCCGCTGCAACT TCACCAATATCCATGCCGGACCGAAGAATTATCTCTCCTCCAACCCGCATTTCGCCAAATCCGCTCTCGCCCGTTATACG CCGCACGATTTCATTGCCCTTGTCGAAAAACATCGCATCGCCTGGCATGAAAAGACGCTCGGCCAGCTCTTCTGCGATGA CAGCGCCAAGGACATCATCCGCATGCTGCTGGCTGAAATGCAGGCGGTGAATGCGAAACTGCGGCTCGAAACATCAGTCT CGGCCGTCACTCATGATGGTGGCCGTTTTCGCGTCACGACCTCAGGCGGCGTCATCGAGGCGGAAAGCCTTGTCGTGGCA ACGGGCGGCAAGTCGATCCCGAAAATGGGCGCGACCGGTTTTGCCTATCAGATCGCCGAACAATTCGGTCTCAAGCTCAT CGAGCCGCGCCCCGGCCTCGTGCCGTTGACGCTCGATCCTGCAGCCCTTGAAAAGCTGAGCCCGCTTGCCGGCGTCGCGG TTCCGGCCGAGGTTTCCCATGGCAAGACCTCGTTTGAGGAAGCGCTGCTGTTCACCCATCGCGGTTTGAGTGGCCCCTCC ATTCTGCAAATCTCGTCCTATTGGCGGGAGGGTGATGCGATCCGGCTGAAACTGGAGCCGGCACGCGATATCGTTTCGCT GCTGAGGCAAGCAAAACAGAAGAACGGCCGCCAGTCGGCTCAAACGGCTCTTTCCGAAATCCTGCCGAAGCGGCTCGCCC AACATGTGGTCGAACAAACCGGCATCACCGGCAATCTCGCCGATATGTCCGAGAAGGTTCTCGCAAAGCTGGCGGCGCAG GTGCAGGACTGGCAGATCAAGCCCGCCGGTTCAGAGGGTTACCGCACGGCGGAAGTCACGCTCGGCGGTGTGGACACCAC GGGCCTCGATTCCCGCAGCATGGCGGCGAAATCCGTGCCAGGCCTCTATTTCATTGGCGAATGTGTTGACGTGACCGGCT GGCTCGGCGGTTATAATTTCCAGTGGGCCTGGGCCTCCGGGCAGGCGGCAGGCGAATTCGCCTGA
Upstream 100 bases:
>100_bases GTGGAGCCATCATAACCGTAGTTTGACAATTGGCGAGGGGGAAAGCGCCATTGACAAGCGGCGGCACTTGGAAAAGAGGA AAGGAAACGGATCGGATGGA
Downstream 100 bases:
>100_bases AAGCGCCTGCCTTAACACCTTGTTAAGGTGCATGGAGTCATCCTGATCAAATGCCAGCAAGGCAGGATCACCCAGTGATC CCGCTGCACATGATGTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MMTEKCDVLILGAGAAGMMGAIRAGKRGRSVIILDHARAPGEKIRISGGGRCNFTNIHAGPKNYLSSNPHFAKSALARYT PHDFIALVEKHRIAWHEKTLGQLFCDDSAKDIIRMLLAEMQAVNAKLRLETSVSAVTHDGGRFRVTTSGGVIEAESLVVA TGGKSIPKMGATGFAYQIAEQFGLKLIEPRPGLVPLTLDPAALEKLSPLAGVAVPAEVSHGKTSFEEALLFTHRGLSGPS ILQISSYWREGDAIRLKLEPARDIVSLLRQAKQKNGRQSAQTALSEILPKRLAQHVVEQTGITGNLADMSEKVLAKLAAQ VQDWQIKPAGSEGYRTAEVTLGGVDTTGLDSRSMAAKSVPGLYFIGECVDVTGWLGGYNFQWAWASGQAAGEFA
Sequences:
>Translated_394_residues MMTEKCDVLILGAGAAGMMGAIRAGKRGRSVIILDHARAPGEKIRISGGGRCNFTNIHAGPKNYLSSNPHFAKSALARYT PHDFIALVEKHRIAWHEKTLGQLFCDDSAKDIIRMLLAEMQAVNAKLRLETSVSAVTHDGGRFRVTTSGGVIEAESLVVA TGGKSIPKMGATGFAYQIAEQFGLKLIEPRPGLVPLTLDPAALEKLSPLAGVAVPAEVSHGKTSFEEALLFTHRGLSGPS ILQISSYWREGDAIRLKLEPARDIVSLLRQAKQKNGRQSAQTALSEILPKRLAQHVVEQTGITGNLADMSEKVLAKLAAQ VQDWQIKPAGSEGYRTAEVTLGGVDTTGLDSRSMAAKSVPGLYFIGECVDVTGWLGGYNFQWAWASGQAAGEFA >Mature_394_residues MMTEKCDVLILGAGAAGMMGAIRAGKRGRSVIILDHARAPGEKIRISGGGRCNFTNIHAGPKNYLSSNPHFAKSALARYT PHDFIALVEKHRIAWHEKTLGQLFCDDSAKDIIRMLLAEMQAVNAKLRLETSVSAVTHDGGRFRVTTSGGVIEAESLVVA TGGKSIPKMGATGFAYQIAEQFGLKLIEPRPGLVPLTLDPAALEKLSPLAGVAVPAEVSHGKTSFEEALLFTHRGLSGPS ILQISSYWREGDAIRLKLEPARDIVSLLRQAKQKNGRQSAQTALSEILPKRLAQHVVEQTGITGNLADMSEKVLAKLAAQ VQDWQIKPAGSEGYRTAEVTLGGVDTTGLDSRSMAAKSVPGLYFIGECVDVTGWLGGYNFQWAWASGQAAGEFA
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=395, Percent_Identity=53.1645569620253, Blast_Score=403, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 42155; Mature: 42155
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTEKCDVLILGAGAAGMMGAIRAGKRGRSVIILDHARAPGEKIRISGGGRCNFTNIHAG CCCCCCCEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCC PKNYLSSNPHFAKSALARYTPHDFIALVEKHRIAWHEKTLGQLFCDDSAKDIIRMLLAEM CHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QAVNAKLRLETSVSAVTHDGGRFRVTTSGGVIEAESLVVATGGKSIPKMGATGFAYQIAE HHHCCEEEEEECEEEEEECCCEEEEEECCCEEEECEEEEEECCCCCCCCCCCHHHHHHHH QFGLKLIEPRPGLVPLTLDPAALEKLSPLAGVAVPAEVSHGKTSFEEALLFTHRGLSGPS HHCCEEECCCCCEEEEEECHHHHHHCCCHHCEECCCCCCCCCHHHHHHHHHHHCCCCCCC ILQISSYWREGDAIRLKLEPARDIVSLLRQAKQKNGRQSAQTALSEILPKRLAQHVVEQT EEEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC GITGNLADMSEKVLAKLAAQVQDWQIKPAGSEGYRTAEVTLGGVDTTGLDSRSMAAKSVP CCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCC GLYFIGECVDVTGWLGGYNFQWAWASGQAAGEFA CEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MMTEKCDVLILGAGAAGMMGAIRAGKRGRSVIILDHARAPGEKIRISGGGRCNFTNIHAG CCCCCCCEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCC PKNYLSSNPHFAKSALARYTPHDFIALVEKHRIAWHEKTLGQLFCDDSAKDIIRMLLAEM CHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QAVNAKLRLETSVSAVTHDGGRFRVTTSGGVIEAESLVVATGGKSIPKMGATGFAYQIAE HHHCCEEEEEECEEEEEECCCEEEEEECCCEEEECEEEEEECCCCCCCCCCCHHHHHHHH QFGLKLIEPRPGLVPLTLDPAALEKLSPLAGVAVPAEVSHGKTSFEEALLFTHRGLSGPS HHCCEEECCCCCEEEEEECHHHHHHCCCHHCEECCCCCCCCCHHHHHHHHHHHCCCCCCC ILQISSYWREGDAIRLKLEPARDIVSLLRQAKQKNGRQSAQTALSEILPKRLAQHVVEQT EEEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC GITGNLADMSEKVLAKLAAQVQDWQIKPAGSEGYRTAEVTLGGVDTTGLDSRSMAAKSVP CCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCC GLYFIGECVDVTGWLGGYNFQWAWASGQAAGEFA CEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]