Click here to switch to the map view.

The map label for this gene is flaB [H]

Identifier: 159184361

GI number: 159184361

Start: 533119

End: 534081

Strand: Reverse

Name: flaB [H]

Synonym: Atu0543

Alternate gene names: 159184361

Gene position: 534081-533119 (Counterclockwise)

Preceding gene: 159184362

Following gene: 15887889

Centisome position: 18.8

GC content: 60.96

Gene sequence:

>963_bases
ATGACGAGCATTATCACGAATGTCGCAGCAATGTCTGCGCTCCAGACCCTGCGCTCTATCGGCCAGAACATGGAATCCAC
CCAGGCACGCGTCTCCTCCGGCCTTCGCGTCGGCGATGCTTCCGACAACGCTGCCTACTGGTCGATCGCAACCACCATGC
GCTCCGACAACATGGCTCTCTCTTCCGTTTCCGACGCTCTCGGCCTCGGCGCCGCAAAGGTGGACACTGCTTCCGCCGGT
ATGAGCTCGGCAATTGACGTCGTTAAGGAAATCAAGGCAAAGCTGGTCACCGCGACTGAAGAAGGCGTCGACCGCACCAA
GGTTCAGGAAGAAATCGGCCAGCTGCAGAAGCAGCTCGCATCGATCTCGCAGGGCGCTTCCTTCTACGGCGAAAACTGGC
TCGTCGGCGTCTCGACGCTCGGCGCAGCAACGCCCGGCACTGACCCGGACAAGTCTGTCGTCGCCGGCTTCGTCCGCGCT
TCCGGCGGTGCAGTTAGCGTTACGACCACGAAATACGCCCTCGACAACACCGCTACCGGCAACGTTCTGTTCGGTTCGGT
CGACGGTACCGGCACTCCCGACGCATCCGGCATTCTCGGCACTGTTGGCACGTTCACGACGGTCGCTGCCCAGTCTGTCT
ACACACTGGATATCACCCAGTACGCCGCCGCAGACCGCGCCACCAACATGGCAGAAGCCCTGACGCTGGTTGAAAACTCG
CTTAAGGCAATGACCAGCGCCGCTGCAAAGCTCGGCTCGCTCTCCATGCGTATCGGCCTGCAGGAAGACTTCGCTTCCAA
GCTGTCCGACTCCGTCGAAAAGGGCATCGGCCGCCTCGTGGACGCTGACATGAACGAAGAGTCCACCCGCCTCAAGGCTC
TGCAGACACAGCAGCAGCTCGGCGTTCAGGCTCTCTCGATCGCCAACAGCAACTCCGAAAGCATCCTGTCGCTCTTCCGT
TAA

Upstream 100 bases:

>100_bases
ACGTTAAAAATCAGCCAGTTAGCAGGCATGATGCTGTGCGCCGTTCCCGGTGAAACCGGAATGTCCCTTCTTTAATCAGC
CATTCAAGGGGCACACTACT

Downstream 100 bases:

>100_bases
TCGAAAGCTGCAGCCGAAAACATCAACCGCGCCGAAAGGCGCGGTTTTTGTTTGTGCTCTTACCTGCGAAATTCACGAGA
TTTTTTGATTAAGAGTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMALSSVSDALGLGAAKVDTASAG
MSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLASISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRA
SGGAVSVTTTKYALDNTATGNVLFGSVDGTGTPDASGILGTVGTFTTVAAQSVYTLDITQYAAADRATNMAEALTLVENS
LKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQLGVQALSIANSNSESILSLFR

Sequences:

>Translated_320_residues
MTSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMALSSVSDALGLGAAKVDTASAG
MSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLASISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRA
SGGAVSVTTTKYALDNTATGNVLFGSVDGTGTPDASGILGTVGTFTTVAAQSVYTLDITQYAAADRATNMAEALTLVENS
LKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQLGVQALSIANSNSESILSLFR
>Mature_319_residues
TSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMALSSVSDALGLGAAKVDTASAGM
SSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLASISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRAS
GGAVSVTTTKYALDNTATGNVLFGSVDGTGTPDASGILGTVGTFTTVAAQSVYTLDITQYAAADRATNMAEALTLVENSL
KAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQLGVQALSIANSNSESILSLFR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 32987; Mature: 32856

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMAL
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCCEEEEEEHHHCCCCHHH
SSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLA
HHHHHHHCCCCHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRASGGAVSVTTTKYALDNTATG
HHHHCCHHCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCC
NVLFGSVDGTGTPDASGILGTVGTFTTVAAQSVYTLDITQYAAADRATNMAEALTLVENS
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHH
LKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQL
HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GVQALSIANSNSESILSLFR
CHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
TSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMAL
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCCEEEEEEHHHCCCCHHH
SSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLA
HHHHHHHCCCCHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRASGGAVSVTTTKYALDNTATG
HHHHCCHHCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCC
NVLFGSVDGTGTPDASGILGTVGTFTTVAAQSVYTLDITQYAAADRATNMAEALTLVENS
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHH
LKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQL
HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GVQALSIANSNSESILSLFR
CHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335288; 11481430 [H]