Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184362
Identifier: 159184362
GI number: 159184362
Start: 534107
End: 534364
Strand: Reverse
Name: 159184362
Synonym: Atu0544
Alternate gene names: NA
Gene position: 534364-534107 (Counterclockwise)
Preceding gene: 15887891
Following gene: 159184361
Centisome position: 18.81
GC content: 48.06
Gene sequence:
>258_bases ATGCATCCACGAGGCCGCATCCGGAAACGGATGCGGCCTTATCTTTTTTTTAAACTTTTGCAGATACGCGCGCGTGCGCG TGAGGGTTGCAATTTTAATTTTGCCGGGAATGAATTTCTTTCCGCGCTTATCAATTCATTAACCAAACCCGCGTTACCTA ATGCTCATCGAAACGGCGAGCTAACGTTAAAAATCAGCCAGTTAGCAGGCATGATGCTGTGCGCCGTTCCCGGTGAAACC GGAATGTCCCTTCTTTAA
Upstream 100 bases:
>100_bases CGGGGCTGGGGGATCCATTTCTTCCCACAAGCAATCGGGGGCTGACCGAACGCAGATTGGGATAGAAAGCATAAAGGTCC GAAAGGCTGAATCGGACTGA
Downstream 100 bases:
>100_bases TCAGCCATTCAAGGGGCACACTACTATGACGAGCATTATCACGAATGTCGCAGCAATGTCTGCGCTCCAGACCCTGCGCT CTATCGGCCAGAACATGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MHPRGRIRKRMRPYLFFKLLQIRARAREGCNFNFAGNEFLSALINSLTKPALPNAHRNGELTLKISQLAGMMLCAVPGET GMSLL
Sequences:
>Translated_85_residues MHPRGRIRKRMRPYLFFKLLQIRARAREGCNFNFAGNEFLSALINSLTKPALPNAHRNGELTLKISQLAGMMLCAVPGET GMSLL >Mature_85_residues MHPRGRIRKRMRPYLFFKLLQIRARAREGCNFNFAGNEFLSALINSLTKPALPNAHRNGELTLKISQLAGMMLCAVPGET GMSLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9558; Mature: 9558
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPRGRIRKRMRPYLFFKLLQIRARAREGCNFNFAGNEFLSALINSLTKPALPNAHRNGE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCE LTLKISQLAGMMLCAVPGETGMSLL EEEEHHHHHCCHHEECCCCCCCCCC >Mature Secondary Structure MHPRGRIRKRMRPYLFFKLLQIRARAREGCNFNFAGNEFLSALINSLTKPALPNAHRNGE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCE LTLKISQLAGMMLCAVPGETGMSLL EEEEHHHHHCCHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA