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The map label for this gene is infA [H]

Identifier: 159184358

GI number: 159184358

Start: 526539

End: 526838

Strand: Reverse

Name: infA [H]

Synonym: Atu0534

Alternate gene names: 159184358

Gene position: 526838-526539 (Counterclockwise)

Preceding gene: 159184359

Following gene: 15887881

Centisome position: 18.54

GC content: 55.0

Gene sequence:

>300_bases
ATGTGCCGGGATTGTGTAGTTTCCGCGCAATTTTCCCGGACAGGACACGTCCGGCACTATCAACAGGAAGAAAACCCTTA
CATGACAAAAGAAGAAGTCCTTGAATTCCCGGGCATCGTAACCGAATTGCTGCCGAACGCAACGTTCCGCGTGAAGCTTG
AGAACGAACACGAGATCATCGCCCACACGGCGGGCCGCATGCGCAAGAACCGTATCCGCGTTCTGGCGGGCGACAAGGTG
CTGGTCGAAATGACGCCTTACGACCTGACCAAGGGCCGCATCACCTATCGCTTCAAGTAA

Upstream 100 bases:

>100_bases
GCAGCAGCCGGTGGCGGATGCGCTTTCAAAAGACTGAAAACTGCCCTTACATCGGGAAAATCGGTACTGATTTTTAAGCC
GATGCTTTAGAGGTTCACAA

Downstream 100 bases:

>100_bases
TCCACCTTTCGCATCGGACGCCCGGGCCGCGCAATGACCAATTCAAAACAAAAGCTCGTTCTGGCATCCGGTTCGCCGCG
GCGTCTGGAGCTGTTGCATC

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MCRDCVVSAQFSRTGHVRHYQQEENPYMTKEEVLEFPGIVTELLPNATFRVKLENEHEIIAHTAGRMRKNRIRVLAGDKV
LVEMTPYDLTKGRITYRFK

Sequences:

>Translated_99_residues
MCRDCVVSAQFSRTGHVRHYQQEENPYMTKEEVLEFPGIVTELLPNATFRVKLENEHEIIAHTAGRMRKNRIRVLAGDKV
LVEMTPYDLTKGRITYRFK
>Mature_99_residues
MCRDCVVSAQFSRTGHVRHYQQEENPYMTKEEVLEFPGIVTELLPNATFRVKLENEHEIIAHTAGRMRKNRIRVLAGDKV
LVEMTPYDLTKGRITYRFK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=70, Percent_Identity=61.4285714285714, Blast_Score=94, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 11610; Mature: 11610

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRDCVVSAQFSRTGHVRHYQQEENPYMTKEEVLEFPGIVTELLPNATFRVKLENEHEII
CCCCCEEEECCCCCCCCEECCCCCCCCCCHHHHHHCCCHHHHHCCCCEEEEEECCCCEEE
AHTAGRMRKNRIRVLAGDKVLVEMTPYDLTKGRITYRFK
EECCCHHCCCEEEEEECCEEEEEECCCCCCCCEEEEEEC
>Mature Secondary Structure
MCRDCVVSAQFSRTGHVRHYQQEENPYMTKEEVLEFPGIVTELLPNATFRVKLENEHEII
CCCCCEEEECCCCCCCCEECCCCCCCCCCHHHHHHCCCHHHHHCCCCEEEEEECCCCEEE
AHTAGRMRKNRIRVLAGDKVLVEMTPYDLTKGRITYRFK
EECCCHHCCCEEEEEECCEEEEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]