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The map label for this gene is acd [H]

Identifier: 159184345

GI number: 159184345

Start: 489997

End: 491793

Strand: Direct

Name: acd [H]

Synonym: Atu0501

Alternate gene names: 159184345

Gene position: 489997-491793 (Clockwise)

Preceding gene: 15887847

Following gene: 15887849

Centisome position: 17.24

GC content: 59.21

Gene sequence:

>1797_bases
ATGCCTGTTTACAAGGCCCCAGTCAAAGACACGCTTTTTATCCTGAACGACGTTCTTGGCCTCGAGCGGTACAACAACCT
GCCCGGCTTCGAGGATGCAACCCCCGACATGATCGAAGCGATCACCGGCGAAGCCGCAAAGCTTGCAGAGGAACGGCTTT
TCCCGCTCAACCTTTCCGGTGACCAGCAGGGCTGCAAGCGCGCCGATGATGGTTCGGTTTCCGTGCCTGACGGTTTCAAG
GCTGCCTATGACGCCTATTGCGAAGGCGGCTGGATCGGCCTTGCCGTGCCTTCCGAATTTGGCGGGCAGGGGCTTCCCTA
TACGTTGCATGCGGCGATCGGCGAATATATGTCGTCCGCCAACCTGTCGCTGATGATGTATCCCGGCCTGACGCAGGGCG
CGATTGCTGCCGTTCTCGTGCATGGCACACAGGAACAGAAGGAAACCTATCTGCCGAAGATGGTGGAAGGCACATGGTCC
GGCACCATGAACCTCACCGAACCCCATTGCGGCACCGATCTCGGCCTGCTGCGCACCAAGGCTGTGCCGCAGGGCGACGG
CAGCTATAAAATATCCGGCCAAAAGATCTTCATCTCTGCCGGCGAACATTCCATGACTGATAATATCGTCCATCTGGTGA
TTGCCCGCATCGAAGGCGCGCCTGAAGGCACCAAGGGCATTTCGCTGTTCATCGTGCCGAAGTTCCTGGTGAAGGAAGAC
GGTACGCTTGGTGAGCGCAACGGTGTTACCTGTGGCGCGATTGAGCACAAGATGGGCATTCACGGCAACGCCACCTGCGT
TATGAACTATGACGATGCGACGGGTTATCTCCTGGGCGCGGAGAACAAGGGCCTTTCGGCCATGTTCGTGATGATGAACG
AGGCCCGCCTCGGCGTTGGCCTGCAAGGTCTTTCGGTCGGCGAGATCGCCTATCAGAACGCCGTCGAATATGCGCGCGAT
CGTATTCAGGGCCGCTCGCTGTCCGGTGCCAAATTCCCCGACAAGAAGGCCGATCCGATTATCGTGCACCCCGACATCCG
CCGCACGCTGATGACCATCAAGGCCTATAACGAGGCTGGCCGCGCCTTCCTGCTGTGGACCGCTCTGCAATCCGATATCG
CCCACCGCGCGGCTGACGAGAAACAGCGCCAGGCGGCGGATGATCTGCTCGGCCTCGTCACGCCGATCCTGAAAGGCGTG
TTGACCGACAAGGGCTTCGACCACGCCGTGATGGCGCAGCAGGTCTTCGGCGGCCATGGCTACATCGAAGAACACGGTAT
GAGCCAATATGTCCGCGATGCGCGTATCACCATGATCTATGAAGGCGCGAACGGCATTCAGGCGCTCGATCTCGTCGGCC
GCAAGCTCGGCATGAATGGCGGCCGCGCTGTCATGGCGCTGTTCAAGGAAATCGGCGATTTCTGCGAGGAAAACCGCGCT
GATGAAAAGCTCAGCCTTTACACAAAGGGCCTGAAGAAGGGCTTGAACGACCTGCAGGCCGCAACCATGTGGTTCATGCA
GAATGCCATGGCCAAGCCCGACAATGCCGGTGCCGGTTCGACCGACTACATGCATCTCTTCGGCATCGTGGTGCTGGGTT
ACATGCAGGCGCTCATGGCGAAAGCTGCGAGCGAAGCCCTTGCGGCAGGCAGCACTTCGGATGAGGATTTCCTCAAGACC
AAGCTTGTCACGGCGAAGTTTTACATGGAGCGCATCATGCCGGAAACGGCGCTGCGCAAGGCCCGCATCGAAACCGGCGC
GGACACCATGATGGAACTGGCTGCGGAAGCGTTCTGA

Upstream 100 bases:

>100_bases
ATTCAGCGGAAATTTGTTTGACGTTTACGCGCACGTCAAATATTGTCATGCCAATCAGCCGGATTGGCTCCGGCGCCCAC
GATGCGGAGGAACATCGGTA

Downstream 100 bases:

>100_bases
GACATCTGGCGCTTACGAGCGCCACAGGGAGAGAGTTTATGACCGACGTTTACATTTACGACCATGTCCGCACTCCGCGC
GGACGCGGCAAGAAGGATGG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 597

Protein sequence:

>598_residues
MPVYKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSGDQQGCKRADDGSVSVPDGFK
AAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSANLSLMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWS
GTMNLTEPHCGTDLGLLRTKAVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKED
GTLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVGLQGLSVGEIAYQNAVEYARD
RIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAGRAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGV
LTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEENRA
DEKLSLYTKGLKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQALMAKAASEALAAGSTSDEDFLKT
KLVTAKFYMERIMPETALRKARIETGADTMMELAAEAF

Sequences:

>Translated_598_residues
MPVYKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSGDQQGCKRADDGSVSVPDGFK
AAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSANLSLMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWS
GTMNLTEPHCGTDLGLLRTKAVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKED
GTLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVGLQGLSVGEIAYQNAVEYARD
RIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAGRAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGV
LTDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEENRA
DEKLSLYTKGLKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQALMAKAASEALAAGSTSDEDFLKT
KLVTAKFYMERIMPETALRKARIETGADTMMELAAEAF
>Mature_597_residues
PVYKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSGDQQGCKRADDGSVSVPDGFKA
AYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSANLSLMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSG
TMNLTEPHCGTDLGLLRTKAVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKEDG
TLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVGLQGLSVGEIAYQNAVEYARDR
IQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAGRAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVL
TDKGFDHAVMAQQVFGGHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEENRAD
EKLSLYTKGLKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQALMAKAASEALAAGSTSDEDFLKTK
LVTAKFYMERIMPETALRKARIETGADTMMELAAEAF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=417, Percent_Identity=25.4196642685851, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI76496475, Length=373, Percent_Identity=30.2949061662198, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI4557235, Length=377, Percent_Identity=29.7082228116711, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI4557233, Length=441, Percent_Identity=27.6643990929705, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI21361497, Length=368, Percent_Identity=25.8152173913043, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI226958414, Length=374, Percent_Identity=25.668449197861, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI226958412, Length=374, Percent_Identity=25.668449197861, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4501857, Length=376, Percent_Identity=26.3297872340426, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI7656849, Length=371, Percent_Identity=27.2237196765499, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI4503943, Length=345, Percent_Identity=25.7971014492754, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI7669494, Length=330, Percent_Identity=25.1515151515152, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI87082384, Length=290, Percent_Identity=29.6551724137931, Blast_Score=113, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=370, Percent_Identity=27.2972972972973, Blast_Score=111, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI71985184, Length=389, Percent_Identity=28.0205655526992, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=432, Percent_Identity=26.8518518518519, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=381, Percent_Identity=27.2965879265092, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=247, Percent_Identity=31.5789473684211, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=371, Percent_Identity=24.5283018867925, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=376, Percent_Identity=26.5957446808511, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=261, Percent_Identity=29.1187739463602, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=371, Percent_Identity=25.3369272237197, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI86563383, Length=351, Percent_Identity=25.9259259259259, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI86563381, Length=351, Percent_Identity=25.9259259259259, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=411, Percent_Identity=26.5206812652068, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=237, Percent_Identity=26.1603375527426, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17534353, Length=338, Percent_Identity=26.9230769230769, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281363737, Length=376, Percent_Identity=29.2553191489362, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI21356377, Length=385, Percent_Identity=27.5324675324675, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24646207, Length=381, Percent_Identity=26.7716535433071, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21355753, Length=371, Percent_Identity=27.2237196765499, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24666513, Length=411, Percent_Identity=25.5474452554745, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24660351, Length=370, Percent_Identity=25.1351351351351, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI19920834, Length=328, Percent_Identity=27.1341463414634, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64623; Mature: 64492

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVYKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCEECCCC
DQQGCKRADDGSVSVPDGFKAAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSA
CHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEEEECCHHCCCCCCCEEHHHHHHHHHHCC
NLSLMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGTMNLTEPHCGTDLGLLRTK
CCEEEECCCCCHHHHHHHEEECCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHC
AVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKED
CCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCC
GTLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVG
CCCCCCCCCEEEEHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEEEEECHHCCCC
LQGLSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCC
RAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVMAQQVFGGHG
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
YIEEHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEENRA
CHHHCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
DEKLSLYTKGLKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQALMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KAASEALAAGSTSDEDFLKTKLVTAKFYMERIMPETALRKARIETGADTMMELAAEAF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
PVYKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCEECCCC
DQQGCKRADDGSVSVPDGFKAAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSA
CHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEEEECCHHCCCCCCCEEHHHHHHHHHHCC
NLSLMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGTMNLTEPHCGTDLGLLRTK
CCEEEECCCCCHHHHHHHEEECCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHC
AVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKED
CCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCC
GTLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVG
CCCCCCCCCEEEEHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEEEEECHHCCCC
LQGLSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCC
RAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVMAQQVFGGHG
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
YIEEHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEENRA
CHHHCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
DEKLSLYTKGLKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQALMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KAASEALAAGSTSDEDFLKTKLVTAKFYMERIMPETALRKARIETGADTMMELAAEAF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]