Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184285
Identifier: 159184285
GI number: 159184285
Start: 378461
End: 378733
Strand: Reverse
Name: 159184285
Synonym: Atu0386
Alternate gene names: NA
Gene position: 378733-378461 (Counterclockwise)
Preceding gene: 15887753
Following gene: 159185415
Centisome position: 13.33
GC content: 51.28
Gene sequence:
>273_bases ATGGGACGCTGGCATAACTTTTCGCGTCACAAGATTTATCAATGCCGCGTTAAGAAAGAATTTCGTATTTTATCGGTTAC GCATGGAAATGCGTGCGCACGACCCGCCGAGGAAGCGAACCTCATGCGCTTTTCCGCAAAAGGTGAAGTGCTAAAACCCC TCCGGCAATTGACTTTGCTCGGCCTATGCCCTTATAAGCCGCGCACGCTCGGCCATAGAAAGCTCGCCCAGGCGGGGTTA GCCGTGCAAAAAACGAAACGCTGTTGCAAATAA
Upstream 100 bases:
>100_bases GATGGTACAGGCCACAAGGCTCATCAGCCCGACAAGTAGATTGATACGACCGCGAATTCTCAATTTCGTTCCCCCAACAA AAACCAGCGCCAAGATGAAA
Downstream 100 bases:
>100_bases TTGCAAATTCAAGAAGGGCCGCACACCGCGGTATTAAATAAATGTCTAAGCGTACTTTCCAACCGTCCAAGCTTGTTCGC AAGCGTCGTCATGGTTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MGRWHNFSRHKIYQCRVKKEFRILSVTHGNACARPAEEANLMRFSAKGEVLKPLRQLTLLGLCPYKPRTLGHRKLAQAGL AVQKTKRCCK
Sequences:
>Translated_90_residues MGRWHNFSRHKIYQCRVKKEFRILSVTHGNACARPAEEANLMRFSAKGEVLKPLRQLTLLGLCPYKPRTLGHRKLAQAGL AVQKTKRCCK >Mature_89_residues GRWHNFSRHKIYQCRVKKEFRILSVTHGNACARPAEEANLMRFSAKGEVLKPLRQLTLLGLCPYKPRTLGHRKLAQAGLA VQKTKRCCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10346; Mature: 10215
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRWHNFSRHKIYQCRVKKEFRILSVTHGNACARPAEEANLMRFSAKGEVLKPLRQLTLL CCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH GLCPYKPRTLGHRKLAQAGLAVQKTKRCCK CCCCCCCCCCCHHHHHHHCHHHHHHHHHCC >Mature Secondary Structure GRWHNFSRHKIYQCRVKKEFRILSVTHGNACARPAEEANLMRFSAKGEVLKPLRQLTLL CCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH GLCPYKPRTLGHRKLAQAGLAVQKTKRCCK CCCCCCCCCCCHHHHHHHCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA