Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is pgi
Identifier: 15887753
GI number: 15887753
Start: 398432
End: 400057
Strand: Reverse
Name: pgi
Synonym: Atu0404
Alternate gene names: 15887753
Gene position: 400057-398432 (Counterclockwise)
Preceding gene: 15887754
Following gene: 159184285
Centisome position: 14.08
GC content: 60.58
Gene sequence:
>1626_bases ATGCAGGCCACCATCGAAAAACTGAAAGCAACGGCAAGCAGCACAGCCGCAACCGATCTGCGCGCCGCTTTTGCGGCCGA CGACCAGAGATTCAGCCGTTTCAGCGTCAAATTCGATGACCTGCTGATGGATTACTCCAAATGTGCCGTCAACGAAGAGA TCGTCACGCTTCTCGAACAGCTCGCGCGCGAAGGCGGTGTCGAGGCCAAGCGCGAGGAGATGTTCTCCGGCAAGGCCATC AACTTCACCGAAGACCGCGCCGTGCTGCATACCGCCCTGCGCAATCGTTCCAACACGCCCGTTCTCGTTGATGACAAGGA CGTGATGCCTGATGTGAACGGCGTTCTGGCAGCCATGGGCAAGTTTGCCGATGCGATCCGTTCCGGCTCCCTGAAAGGTG CGACCGGGAAAAAGATTACCGACGTCGTCAATATTGGTATTGGCGGTTCCGATCTCGGCCCTGTTATGGCGACGCTGGCG CTTGCGCCCTTCCATGACGGCCCGCGTGCGCATTTCGTTTCCAATATCGACGGCGCGCATATTGCCGATACGCTGAAGCT TCTCGATCCGGAAACCTCTCTCTTCATCATCGCATCGAAGACCTTCACCACCATCGAGACGATGACGAATGCCGCCACCG CGCGCCGTTTCATCGCCGAAAAGCTGGGCGAAGGCGCCGTCAAGCATCACTTCGCCGCCGTCTCCACCGCGCTGGACAAG GTCGCCGCCTTCGGTATCGAAAGCGACCGCATCTTCGGTTTCTGGGACTGGGTGGGCGGACGTTATTCGATCTGGTCGGC CATCGGCCTGCCGCTGATGATCGCCATCGGGCCTGACAATTTCGGCAAGTTCCTGGATGGCGCGCATGCCATGGATCGCC ACTTCCGCGAGGCGCCGATCCGCGAAAACCTGCCGATGCTACTCGGCCTCATCGGCTTCTATAACCGTAACGTGCTGGAC TATCCGACACGCGCGATCCTGCCCTATGACCAGCGCCTGTCGCGTTTCCCGGCCTATCTTCAGCAGCTCGACATGGAATC GAACGGCAAGGGTGTGACCATCGACGGCACGCCGGTCGAAGGCCAGTCCGGTCCGGTCGTCTGGGGCGAGCCCGGCACCA ATGGCCAGCACGCCTTCTACCAGCTGATCCATCAGGGCACGAGCGTCATTCCGGCCGAATTCATGATCGCCGCCAATGGC TTTGAGCCCGAACTGCGCCATCAGCACCAGCTTCTTATCGCTAATTGCCTGGCGCAGTCGGAAGCGCTGATGAAGGGACG TACGCTTGCCGAAGCGAAGGCCCAGCTCACCTCCAAGGGCATGGAAGACAGCCAAGCCGATTTCATCGCGCCGCACCGTG TCTTCACCGGCAATCGCCCCTCCATCACCTTCGTTTACGACAAGCTGACGCCCTTTGCGCTCGGCCGGCTCATCGCGCTC TATGAACATCGCGTTTTCGTGGAAGGTGTGCTGTTCCGCATCAACTCCTTTGATCAGTGGGGCGTGGAGCTTGGCAAGGA ACTGGCCACCGGCCTGCTTCCCGTCGTGGAAGGCAAGGAGAGCGCCGCCGGCCATGACAGCTCGACACAAGGGCTGGTGA AGGCGCTGGCGGGTCTCGCCGGCTGA
Upstream 100 bases:
>100_bases TCTTTTCTCCCGGCCCTTTTCTTTTATCGAAGTCGCCTTGATTTGGCCGCCGGAAAAAGAATAGTTTCCTCATCCTTCCA CGGAAGCCGAGGAGCATAAG
Downstream 100 bases:
>100_bases GGCTATCCTTTAAAAAAAAGCCGGAGCTGTCTCCGGCTTTTTTAATGCGCTTCGCTCAAATATAAAGTGCCGCCATCTTC CGCCACGCACCGGCACGATG
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MQATIEKLKATASSTAATDLRAAFAADDQRFSRFSVKFDDLLMDYSKCAVNEEIVTLLEQLAREGGVEAKREEMFSGKAI NFTEDRAVLHTALRNRSNTPVLVDDKDVMPDVNGVLAAMGKFADAIRSGSLKGATGKKITDVVNIGIGGSDLGPVMATLA LAPFHDGPRAHFVSNIDGAHIADTLKLLDPETSLFIIASKTFTTIETMTNAATARRFIAEKLGEGAVKHHFAAVSTALDK VAAFGIESDRIFGFWDWVGGRYSIWSAIGLPLMIAIGPDNFGKFLDGAHAMDRHFREAPIRENLPMLLGLIGFYNRNVLD YPTRAILPYDQRLSRFPAYLQQLDMESNGKGVTIDGTPVEGQSGPVVWGEPGTNGQHAFYQLIHQGTSVIPAEFMIAANG FEPELRHQHQLLIANCLAQSEALMKGRTLAEAKAQLTSKGMEDSQADFIAPHRVFTGNRPSITFVYDKLTPFALGRLIAL YEHRVFVEGVLFRINSFDQWGVELGKELATGLLPVVEGKESAAGHDSSTQGLVKALAGLAG
Sequences:
>Translated_541_residues MQATIEKLKATASSTAATDLRAAFAADDQRFSRFSVKFDDLLMDYSKCAVNEEIVTLLEQLAREGGVEAKREEMFSGKAI NFTEDRAVLHTALRNRSNTPVLVDDKDVMPDVNGVLAAMGKFADAIRSGSLKGATGKKITDVVNIGIGGSDLGPVMATLA LAPFHDGPRAHFVSNIDGAHIADTLKLLDPETSLFIIASKTFTTIETMTNAATARRFIAEKLGEGAVKHHFAAVSTALDK VAAFGIESDRIFGFWDWVGGRYSIWSAIGLPLMIAIGPDNFGKFLDGAHAMDRHFREAPIRENLPMLLGLIGFYNRNVLD YPTRAILPYDQRLSRFPAYLQQLDMESNGKGVTIDGTPVEGQSGPVVWGEPGTNGQHAFYQLIHQGTSVIPAEFMIAANG FEPELRHQHQLLIANCLAQSEALMKGRTLAEAKAQLTSKGMEDSQADFIAPHRVFTGNRPSITFVYDKLTPFALGRLIAL YEHRVFVEGVLFRINSFDQWGVELGKELATGLLPVVEGKESAAGHDSSTQGLVKALAGLAG >Mature_541_residues MQATIEKLKATASSTAATDLRAAFAADDQRFSRFSVKFDDLLMDYSKCAVNEEIVTLLEQLAREGGVEAKREEMFSGKAI NFTEDRAVLHTALRNRSNTPVLVDDKDVMPDVNGVLAAMGKFADAIRSGSLKGATGKKITDVVNIGIGGSDLGPVMATLA LAPFHDGPRAHFVSNIDGAHIADTLKLLDPETSLFIIASKTFTTIETMTNAATARRFIAEKLGEGAVKHHFAAVSTALDK VAAFGIESDRIFGFWDWVGGRYSIWSAIGLPLMIAIGPDNFGKFLDGAHAMDRHFREAPIRENLPMLLGLIGFYNRNVLD YPTRAILPYDQRLSRFPAYLQQLDMESNGKGVTIDGTPVEGQSGPVVWGEPGTNGQHAFYQLIHQGTSVIPAEFMIAANG FEPELRHQHQLLIANCLAQSEALMKGRTLAEAKAQLTSKGMEDSQADFIAPHRVFTGNRPSITFVYDKLTPFALGRLIAL YEHRVFVEGVLFRINSFDQWGVELGKELATGLLPVVEGKESAAGHDSSTQGLVKALAGLAG
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family
Homologues:
Organism=Homo sapiens, GI18201905, Length=523, Percent_Identity=55.8317399617591, Blast_Score=599, Evalue=1e-171, Organism=Homo sapiens, GI296080693, Length=523, Percent_Identity=51.8164435946463, Blast_Score=542, Evalue=1e-154, Organism=Escherichia coli, GI1790457, Length=520, Percent_Identity=54.2307692307692, Blast_Score=578, Evalue=1e-166, Organism=Caenorhabditis elegans, GI71996703, Length=517, Percent_Identity=55.1257253384913, Blast_Score=578, Evalue=1e-165, Organism=Caenorhabditis elegans, GI71996708, Length=517, Percent_Identity=55.1257253384913, Blast_Score=578, Evalue=1e-165, Organism=Saccharomyces cerevisiae, GI6319673, Length=536, Percent_Identity=49.6268656716418, Blast_Score=525, Evalue=1e-150, Organism=Drosophila melanogaster, GI24651916, Length=541, Percent_Identity=53.2347504621072, Blast_Score=592, Evalue=1e-169, Organism=Drosophila melanogaster, GI24651914, Length=541, Percent_Identity=53.2347504621072, Blast_Score=592, Evalue=1e-169, Organism=Drosophila melanogaster, GI17737445, Length=541, Percent_Identity=53.2347504621072, Blast_Score=592, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G6PI_AGRT5 (Q8UI94)
Other databases:
- EMBL: AE007869 - PIR: AC2626 - PIR: B97408 - RefSeq: NP_353434.1 - ProteinModelPortal: Q8UI94 - SMR: Q8UI94 - STRING: Q8UI94 - GeneID: 1132442 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0404 - HOGENOM: HBG352954 - OMA: GPKIVSQ - PhylomeDB: Q8UI94 - ProtClustDB: PRK00179 - BioCyc: ATUM176299-1:ATU0404-MONOMER - GO: GO:0005737 - GO: GO:0006094 - GO: GO:0006096 - HAMAP: MF_00473 - InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 - Gene3D: G3DSA:1.10.1390.10 - PANTHER: PTHR11469 - PRINTS: PR00662
Pfam domain/function: PF00342 PGI
EC number: =5.3.1.9
Molecular weight: Translated: 58710; Mature: 58710
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1; PS00174 P_GLUCOSE_ISOMERASE_2; PS51463 P_GLUCOSE_ISOMERASE_3
Important sites: ACT_SITE 346-346 ACT_SITE 377-377 ACT_SITE 506-506
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQATIEKLKATASSTAATDLRAAFAADDQRFSRFSVKFDDLLMDYSKCAVNEEIVTLLEQ CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH LAREGGVEAKREEMFSGKAINFTEDRAVLHTALRNRSNTPVLVDDKDVMPDVNGVLAAMG HHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHH KFADAIRSGSLKGATGKKITDVVNIGIGGSDLGPVMATLALAPFHDGPRAHFVSNIDGAH HHHHHHHCCCCCCCCCCCEEHHEEECCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCHH IADTLKLLDPETSLFIIASKTFTTIETMTNAATARRFIAEKLGEGAVKHHFAAVSTALDK HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VAAFGIESDRIFGFWDWVGGRYSIWSAIGLPLMIAIGPDNFGKFLDGAHAMDRHFREAPI HHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEEEECCCHHHHHHCCHHHHHHHHHHCCC RENLPMLLGLIGFYNRNVLDYPTRAILPYDQRLSRFPAYLQQLDMESNGKGVTIDGTPVE CCCHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC GQSGPVVWGEPGTNGQHAFYQLIHQGTSVIPAEFMIAANGFEPELRHQHQLLIANCLAQS CCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH EALMKGRTLAEAKAQLTSKGMEDSQADFIAPHRVFTGNRPSITFVYDKLTPFALGRLIAL HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCHHHHHHHHHH YEHRVFVEGVLFRINSFDQWGVELGKELATGLLPVVEGKESAAGHDSSTQGLVKALAGLA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHCC G C >Mature Secondary Structure MQATIEKLKATASSTAATDLRAAFAADDQRFSRFSVKFDDLLMDYSKCAVNEEIVTLLEQ CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH LAREGGVEAKREEMFSGKAINFTEDRAVLHTALRNRSNTPVLVDDKDVMPDVNGVLAAMG HHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHH KFADAIRSGSLKGATGKKITDVVNIGIGGSDLGPVMATLALAPFHDGPRAHFVSNIDGAH HHHHHHHCCCCCCCCCCCEEHHEEECCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCHH IADTLKLLDPETSLFIIASKTFTTIETMTNAATARRFIAEKLGEGAVKHHFAAVSTALDK HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VAAFGIESDRIFGFWDWVGGRYSIWSAIGLPLMIAIGPDNFGKFLDGAHAMDRHFREAPI HHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEEEECCCHHHHHHCCHHHHHHHHHHCCC RENLPMLLGLIGFYNRNVLDYPTRAILPYDQRLSRFPAYLQQLDMESNGKGVTIDGTPVE CCCHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC GQSGPVVWGEPGTNGQHAFYQLIHQGTSVIPAEFMIAANGFEPELRHQHQLLIANCLAQS CCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH EALMKGRTLAEAKAQLTSKGMEDSQADFIAPHRVFTGNRPSITFVYDKLTPFALGRLIAL HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCHHHHHHHHHH YEHRVFVEGVLFRINSFDQWGVELGKELATGLLPVVEGKESAAGHDSSTQGLVKALAGLA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194