Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184155
Identifier: 159184155
GI number: 159184155
Start: 101634
End: 102038
Strand: Direct
Name: 159184155
Synonym: Atu0097
Alternate gene names: NA
Gene position: 101634-102038 (Clockwise)
Preceding gene: 159184154
Following gene: 15887452
Centisome position: 3.58
GC content: 58.02
Gene sequence:
>405_bases TTGGAGACATTCCGGCTGGACGAGAGACTGGCGCGCGACAGCGTCCTGGTGACACGATTGGGTCTTTGCGAGCTTCGCTT GCAGAATGACAATCGCTGGCCCTGGCTGTTGCTGGTGCCGCAAAGAGACGGCGTCAGCGAATTGTTCGATCTCACCCCGC TCGATCAGGCCGTGCTGACATTCGAGACCAATCTCGTCGCATCCGCCTTGAAGGAAATCACCGGAGCCACCAAGATAAAT GTCGGTGCCTTGGGCAATATCGTCCGGCAGCTGCATGTCCATATTATCGCCCGCAATGAAGGCGACACCTGCTGGCCCGG TCCTATCTGGGGGCACGGAACGGCGGTGCCTTATGCGGTGGGCGAGAAGGAAAGTTTGATGAAAAAAATCTCCGGCGCGC TCTGA
Upstream 100 bases:
>100_bases CACCAACCTCCCGGGGCCACATATCGGCAATATCGACAGCAAATGCAAGCCAAGCCTTCAAAAAACTGCTATCACGATGA AAACAAACATGGAGGACACC
Downstream 100 bases:
>100_bases TGATGTCAATGAAAATTTTTGAAACCACTGCCCCCCATCCCGAAGCAAGCCTGCTGACGGCCTTTTCCAAAAATGCTCTC GACCGTTTCGCTGAAAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; Diadenosine Tetraphosphate; HIT Domain-Containing Protein; HIT1 Protein; HIT Family Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues METFRLDERLARDSVLVTRLGLCELRLQNDNRWPWLLLVPQRDGVSELFDLTPLDQAVLTFETNLVASALKEITGATKIN VGALGNIVRQLHVHIIARNEGDTCWPGPIWGHGTAVPYAVGEKESLMKKISGAL
Sequences:
>Translated_134_residues METFRLDERLARDSVLVTRLGLCELRLQNDNRWPWLLLVPQRDGVSELFDLTPLDQAVLTFETNLVASALKEITGATKIN VGALGNIVRQLHVHIIARNEGDTCWPGPIWGHGTAVPYAVGEKESLMKKISGAL >Mature_134_residues METFRLDERLARDSVLVTRLGLCELRLQNDNRWPWLLLVPQRDGVSELFDLTPLDQAVLTFETNLVASALKEITGATKIN VGALGNIVRQLHVHIIARNEGDTCWPGPIWGHGTAVPYAVGEKESLMKKISGAL
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14871; Mature: 14871
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METFRLDERLARDSVLVTRLGLCELRLQNDNRWPWLLLVPQRDGVSELFDLTPLDQAVLT CCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEECCCCHHHHHCCCCCCHHHHH FETNLVASALKEITGATKINVGALGNIVRQLHVHIIARNEGDTCWPGPIWGHGTAVPYAV HHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCEEE GEKESLMKKISGAL CCHHHHHHHHHCCC >Mature Secondary Structure METFRLDERLARDSVLVTRLGLCELRLQNDNRWPWLLLVPQRDGVSELFDLTPLDQAVLT CCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEECCCCHHHHHCCCCCCHHHHH FETNLVASALKEITGATKINVGALGNIVRQLHVHIIARNEGDTCWPGPIWGHGTAVPYAV HHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCEEE GEKESLMKKISGAL CCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA