Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159184144

Identifier: 159184144

GI number: 159184144

Start: 62235

End: 62492

Strand: Direct

Name: 159184144

Synonym: Atu0058

Alternate gene names: NA

Gene position: 62235-62492 (Clockwise)

Preceding gene: 159184140

Following gene: 15887415

Centisome position: 2.19

GC content: 52.71

Gene sequence:

>258_bases
GTGTTCCCTATCAGAGCCGTGGAAGACGACCACGTTGATAGGACGGGTGTGGAAGCACAGCAATGTGTGAAGCTTACCGT
TACTAATAGCTCGATCGACTTCTTCGTTCCCATTGATTATGTTCATCGAACAAAGGTCGATGACATCTGTTCTGTCTTCA
CGCTGACGTGGCCTTCGGCCACTACGCTGCAGACGGCGCGCCAAACGATTGGCGACGGACTAGCGTCCTGTATGGCTGCC
AAGCTCGATCTCGAGTAA

Upstream 100 bases:

>100_bases
TCTGGTGGATCTGTTGTCCTGCCAAGGGCATAGCAGAGTAGCTATATACGGAATGGATAACCGCTGAAGGCATCTAAGCG
GGAAACCAACCTGAAAACGA

Downstream 100 bases:

>100_bases
GGCAGGCAAACAGACCAGTCACAGAAAGACGTGTTAAATTAAATCAGACGAAAGTCTGCCAGCTTCTCGAAAACAACAGT
CCATGTTAAAACATGAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MFPIRAVEDDHVDRTGVEAQQCVKLTVTNSSIDFFVPIDYVHRTKVDDICSVFTLTWPSATTLQTARQTIGDGLASCMAA
KLDLE

Sequences:

>Translated_85_residues
MFPIRAVEDDHVDRTGVEAQQCVKLTVTNSSIDFFVPIDYVHRTKVDDICSVFTLTWPSATTLQTARQTIGDGLASCMAA
KLDLE
>Mature_85_residues
MFPIRAVEDDHVDRTGVEAQQCVKLTVTNSSIDFFVPIDYVHRTKVDDICSVFTLTWPSATTLQTARQTIGDGLASCMAA
KLDLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9405; Mature: 9405

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPIRAVEDDHVDRTGVEAQQCVKLTVTNSSIDFFVPIDYVHRTKVDDICSVFTLTWPSA
CCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCEEEEECCHHHHCCHHHHHHHEEECCCCC
TTLQTARQTIGDGLASCMAAKLDLE
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFPIRAVEDDHVDRTGVEAQQCVKLTVTNSSIDFFVPIDYVHRTKVDDICSVFTLTWPSA
CCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCEEEEECCHHHHCCHHHHHHHEEECCCCC
TTLQTARQTIGDGLASCMAAKLDLE
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA