Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is panK
Identifier: 159184134
GI number: 159184134
Start: 39781
End: 40749
Strand: Reverse
Name: panK
Synonym: Atu0037
Alternate gene names: 159184134
Gene position: 40749-39781 (Counterclockwise)
Preceding gene: 159184135
Following gene: 159184131
Centisome position: 1.43
GC content: 56.86
Gene sequence:
>969_bases ATGCCAGGCACACTCGATCATTTTCGTGCGGACGAATATTCGCCCTATCACTTCTTCAGTTCCGAAGAATGGGCCAAATT CCGCGCTGACACGCCACTGACGCTTTCCGCCGATGAGGTGAAGCGGCTGCGATCGCTGGATGACCCCATCGATCTGGATG AAGTGCGGCGCATTTACCTGTCGCTGTCGCGCCTCCTTTCATCGCATGTTGAAGCGTCGCAGCTGCTTTTCGAACAGCGC AACCGCTTTCTGAATATGGGGGATGTCAACAAGACGCCCTTCGTCATCGGCATTGCCGGATCGGTGGCCGTTGGCAAATC GACGACAGCGCGTATCCTGAAAGAGCTTCTGGCGCGGTGGCCTTCCAGCCCGAAGGTCGATCTCATCACCACTGACGGGT TTCTTTACCCGAACGAGGTGCTGCGGCGCGAAAACCTGATGGAGCGCAAGGGCTTTCCGGAAAGCTACGATATCGGCGCG CTGCTGCGTTTTCTTTCGGCGATCAAGGCGGGCCAGCCGAATGTGAAGGCCCCGCGTTATTCGCACCTGACCTACGACGT GTTGCCGAACGAATTCACCGTCATCGACCAGCCGGATATCCTGATCTTCGAAGGCATCAACGTGCTGCAATCCCGTGACC TTCCGGCGGGCGGTCGTATCGTGCCGATCGTTTCCGACTTCTTCGATTTCTCGATCTATATCGATGCCGATGAGGATTTC ATTCACAACTGGTATGTGAACCGGTTCATGAACCTGAGACAGACCGCCTTCCGCGACCCGAACTCATTCTTCAACCGGTA TGCGTCGATCAGCGAAGAGGCGGCACTCAGCATTGCCGAAGGGCTCTGGCAGAACATCAACCTGAAGAACCTGCGCCAGA ACATCGTGCCGACGCGCCCGCGCGCCGATCTTATTCTGCGCAAGGGAGAGAACCACCTGATAGATACGGTGGCGCTGCGA AAGCTCTGA
Upstream 100 bases:
>100_bases TTTTTGCCGAACTGGAGCGTCGCACAGGTCAGACCGGCCTTGCGGAAAAGGCGGCGAGGCCGACACCATGAAGATTGAGG CGGGCAGCGGGGAGAGAGGC
Downstream 100 bases:
>100_bases CAAACTGGGTGCTTGCGGGTTAATCGCCCGAGGGTTTGCCGCGCATTTTCTTGATATCGGAACGACCGGATTTTGCCTTG AGGCGGCGTTCGACAGATCC
Product: pantothenate kinase
Products: NA
Alternate protein names: Pantothenic acid kinase
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MPGTLDHFRADEYSPYHFFSSEEWAKFRADTPLTLSADEVKRLRSLDDPIDLDEVRRIYLSLSRLLSSHVEASQLLFEQR NRFLNMGDVNKTPFVIGIAGSVAVGKSTTARILKELLARWPSSPKVDLITTDGFLYPNEVLRRENLMERKGFPESYDIGA LLRFLSAIKAGQPNVKAPRYSHLTYDVLPNEFTVIDQPDILIFEGINVLQSRDLPAGGRIVPIVSDFFDFSIYIDADEDF IHNWYVNRFMNLRQTAFRDPNSFFNRYASISEEAALSIAEGLWQNINLKNLRQNIVPTRPRADLILRKGENHLIDTVALR KL
Sequences:
>Translated_322_residues MPGTLDHFRADEYSPYHFFSSEEWAKFRADTPLTLSADEVKRLRSLDDPIDLDEVRRIYLSLSRLLSSHVEASQLLFEQR NRFLNMGDVNKTPFVIGIAGSVAVGKSTTARILKELLARWPSSPKVDLITTDGFLYPNEVLRRENLMERKGFPESYDIGA LLRFLSAIKAGQPNVKAPRYSHLTYDVLPNEFTVIDQPDILIFEGINVLQSRDLPAGGRIVPIVSDFFDFSIYIDADEDF IHNWYVNRFMNLRQTAFRDPNSFFNRYASISEEAALSIAEGLWQNINLKNLRQNIVPTRPRADLILRKGENHLIDTVALR KL >Mature_321_residues PGTLDHFRADEYSPYHFFSSEEWAKFRADTPLTLSADEVKRLRSLDDPIDLDEVRRIYLSLSRLLSSHVEASQLLFEQRN RFLNMGDVNKTPFVIGIAGSVAVGKSTTARILKELLARWPSSPKVDLITTDGFLYPNEVLRRENLMERKGFPESYDIGAL LRFLSAIKAGQPNVKAPRYSHLTYDVLPNEFTVIDQPDILIFEGINVLQSRDLPAGGRIVPIVSDFFDFSIYIDADEDFI HNWYVNRFMNLRQTAFRDPNSFFNRYASISEEAALSIAEGLWQNINLKNLRQNIVPTRPRADLILRKGENHLIDTVALRK L
Specific function: Coenzyme A (CoA) biosynthesis; first step. [C]
COG id: COG1072
COG function: function code H; Panthothenate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic pantothenate kinase family
Homologues:
Organism=Escherichia coli, GI1790409, Length=312, Percent_Identity=52.2435897435897, Blast_Score=324, Evalue=4e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAA_AGRT5 (Q8UJ92)
Other databases:
- EMBL: AE007869 - PIR: AF2581 - PIR: D97363 - RefSeq: NP_353076.2 - ProteinModelPortal: Q8UJ92 - SMR: Q8UJ92 - STRING: Q8UJ92 - GeneID: 1132075 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0037 - eggNOG: COG1072 - HOGENOM: HBG732538 - OMA: GLNVLQP - PhylomeDB: Q8UJ92 - ProtClustDB: PRK05439 - BioCyc: ATUM176299-1:ATU0037-MONOMER - GO: GO:0005737 - HAMAP: MF_00215 - InterPro: IPR004566 - InterPro: IPR006083 - PANTHER: PTHR10285:SF7 - PIRSF: PIRSF000545 - TIGRFAMs: TIGR00554
Pfam domain/function: PF00485 PRK
EC number: =2.7.1.33
Molecular weight: Translated: 36937; Mature: 36806
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTLDHFRADEYSPYHFFSSEEWAKFRADTPLTLSADEVKRLRSLDDPIDLDEVRRIYL CCCCCCCCCCCCCCCCEECCCCHHHHHCCCCCCEECHHHHHHHHCCCCCCCHHHHHHHHH SLSRLLSSHVEASQLLFEQRNRFLNMGDVNKTPFVIGIAGSVAVGKSTTARILKELLARW HHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHC PSSPKVDLITTDGFLYPNEVLRRENLMERKGFPESYDIGALLRFLSAIKAGQPNVKAPRY CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC SHLTYDVLPNEFTVIDQPDILIFEGINVLQSRDLPAGGRIVPIVSDFFDFSIYIDADEDF CCCEEEECCCCEEEECCCCEEEECCCHHHHCCCCCCCCEEEHEECCCCCEEEEEECCHHH IHNWYVNRFMNLRQTAFRDPNSFFNRYASISEEAALSIAEGLWQNINLKNLRQNIVPTRP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC RADLILRKGENHLIDTVALRKL CHHEEEECCCCHHHHHHHHHCC >Mature Secondary Structure PGTLDHFRADEYSPYHFFSSEEWAKFRADTPLTLSADEVKRLRSLDDPIDLDEVRRIYL CCCCCCCCCCCCCCCEECCCCHHHHHCCCCCCEECHHHHHHHHCCCCCCCHHHHHHHHH SLSRLLSSHVEASQLLFEQRNRFLNMGDVNKTPFVIGIAGSVAVGKSTTARILKELLARW HHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHC PSSPKVDLITTDGFLYPNEVLRRENLMERKGFPESYDIGALLRFLSAIKAGQPNVKAPRY CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC SHLTYDVLPNEFTVIDQPDILIFEGINVLQSRDLPAGGRIVPIVSDFFDFSIYIDADEDF CCCEEEECCCCEEEECCCCEEEECCCHHHHCCCCCCCCEEEHEECCCCCEEEEEECCHHH IHNWYVNRFMNLRQTAFRDPNSFFNRYASISEEAALSIAEGLWQNINLKNLRQNIVPTRP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC RADLILRKGENHLIDTVALRKL CHHEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194