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The map label for this gene is holA

Identifier: 15889999

GI number: 15889999

Start: 2749286

End: 2750323

Strand: Direct

Name: holA

Synonym: Atu2750

Alternate gene names: NA

Gene position: 2749286-2750323 (Clockwise)

Preceding gene: 159185360

Following gene: 159185364

Centisome position: 96.75

GC content: 58.67

Gene sequence:

>1038_bases
GTGGCGGAGATAAAGTCCCATGAGTTCGAGCGCTTCGCCGAAAATCCGGCGGAGCGCTTTCGCGTTTTTGTGCTCTATGG
ACCGGATCGTGGTCTTGTATCGGAGCGGGCAGGCCTCATCGCCAAGAAGACCGGCATCGATCCCGATGACGCTTTCGCAT
CGCTAAAACTGACCGCATCCGATCTGCAGGGCGACCCCGGTCGCCTGCTTGATGAAGTGAACGCCATCGGCCTTTTTGGT
GGCGAAAAACTTGTGTGGGTCAAAAGCGCCTCCGCTGAAAAGGCGCTGGTGGATGCGCTTCAGATTCTGGCAGACACACC
GCCGGAAGCAAGTTTCCTGATCATCGAAGCGGGCGACATCAAAAAGGGCACGGGGCTGCGTAAGATAGCGGAGCCGGCGC
GCTCCATCGCGGCAATCCCCTGTTATGCGGACGATGCGCGCTCCTTAAACGCATTGATAGATCAGGAACTCTCCGCCAAT
AATCTGCGCATTGCACCGGCTGCACGACAAAGGCTGATCGAGCAGCTCGGCGGCGACCGTATCGCCTCGCGCAACGAAAT
CCGCAAGCTGGCGCTCTATTGCCTCGGGGCCGACGTGATCGAGGAAGATGATATTCTGGCCATCATCGGCGATGCCAGCA
CGGTTTCGGCCGACGATGCCGTCGACGCCATCCTGAAAGGCGACAGGAACGCCTTTTTCCACGCCACCCAGAAGATCATT
TCATCGAAAACGCCGATCTTCCTTGTCCTCCAGGGATGCCTCAAGCAATTCCAGCTGCTCGACCAGATGCGCGCCGAGAT
GGATGAGAAAAAGCAGCAGGCCGGCCAGGTCATGCAGACACTCGGACGCCATATCCATTTTCGCCGGAAACCGATCATCG
AAAGAGCGCTGCGGACGTGGCAGCCAGCGGCGATTGCCCGTGAGATGAACCGTCTGCAGGCAGCCATCCTGCAAAGCCGC
CAGCGGCAAAGCCTGGAGGAAAGCGTGGCTCTTCTAACATTGCTGTCGACCACGCTTCAGTCCGGTCGCGGTGGATAA

Upstream 100 bases:

>100_bases
TCCGGGCGATCCGCGACGCCGAAAACCGTGCGGCCCGCGAGCTGGCTGAAATCATCCGCACCGATATCGCCGCCACCCTC
GGCCGCTGAGAGCGGCGGCC

Downstream 100 bases:

>100_bases
ACAAAAAAGCCCTCGTGCTGATGCAACGAGGGCTTTTCGAATTTTGATCCAGAAACGTTCTGGTTCAGTCGCCCTTGCCG
GGCTCAGCAGAGAAATAGAG

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MAEIKSHEFERFAENPAERFRVFVLYGPDRGLVSERAGLIAKKTGIDPDDAFASLKLTASDLQGDPGRLLDEVNAIGLFG
GEKLVWVKSASAEKALVDALQILADTPPEASFLIIEAGDIKKGTGLRKIAEPARSIAAIPCYADDARSLNALIDQELSAN
NLRIAPAARQRLIEQLGGDRIASRNEIRKLALYCLGADVIEEDDILAIIGDASTVSADDAVDAILKGDRNAFFHATQKII
SSKTPIFLVLQGCLKQFQLLDQMRAEMDEKKQQAGQVMQTLGRHIHFRRKPIIERALRTWQPAAIAREMNRLQAAILQSR
QRQSLEESVALLTLLSTTLQSGRGG

Sequences:

>Translated_345_residues
MAEIKSHEFERFAENPAERFRVFVLYGPDRGLVSERAGLIAKKTGIDPDDAFASLKLTASDLQGDPGRLLDEVNAIGLFG
GEKLVWVKSASAEKALVDALQILADTPPEASFLIIEAGDIKKGTGLRKIAEPARSIAAIPCYADDARSLNALIDQELSAN
NLRIAPAARQRLIEQLGGDRIASRNEIRKLALYCLGADVIEEDDILAIIGDASTVSADDAVDAILKGDRNAFFHATQKII
SSKTPIFLVLQGCLKQFQLLDQMRAEMDEKKQQAGQVMQTLGRHIHFRRKPIIERALRTWQPAAIAREMNRLQAAILQSR
QRQSLEESVALLTLLSTTLQSGRGG
>Mature_344_residues
AEIKSHEFERFAENPAERFRVFVLYGPDRGLVSERAGLIAKKTGIDPDDAFASLKLTASDLQGDPGRLLDEVNAIGLFGG
EKLVWVKSASAEKALVDALQILADTPPEASFLIIEAGDIKKGTGLRKIAEPARSIAAIPCYADDARSLNALIDQELSANN
LRIAPAARQRLIEQLGGDRIASRNEIRKLALYCLGADVIEEDDILAIIGDASTVSADDAVDAILKGDRNAFFHATQKIIS
SKTPIFLVLQGCLKQFQLLDQMRAEMDEKKQQAGQVMQTLGRHIHFRRKPIIERALRTWQPAAIAREMNRLQAAILQSRQ
RQSLEESVALLTLLSTTLQSGRGG

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 37804; Mature: 37673

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIKSHEFERFAENPAERFRVFVLYGPDRGLVSERAGLIAKKTGIDPDDAFASLKLTAS
CCCCCHHHHHHHHCCHHHHEEEEEEECCCCCHHHHHHCCHHHCCCCCCCHHHHEEEEEHH
DLQGDPGRLLDEVNAIGLFGGEKLVWVKSASAEKALVDALQILADTPPEASFLIIEAGDI
HCCCCHHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
KKGTGLRKIAEPARSIAAIPCYADDARSLNALIDQELSANNLRIAPAARQRLIEQLGGDR
CCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCC
IASRNEIRKLALYCLGADVIEEDDILAIIGDASTVSADDAVDAILKGDRNAFFHATQKII
CCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
SSKTPIFLVLQGCLKQFQLLDQMRAEMDEKKQQAGQVMQTLGRHIHFRRKPIIERALRTW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
QPAAIAREMNRLQAAILQSRQRQSLEESVALLTLLSTTLQSGRGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AEIKSHEFERFAENPAERFRVFVLYGPDRGLVSERAGLIAKKTGIDPDDAFASLKLTAS
CCCCHHHHHHHHCCHHHHEEEEEEECCCCCHHHHHHCCHHHCCCCCCCHHHHEEEEEHH
DLQGDPGRLLDEVNAIGLFGGEKLVWVKSASAEKALVDALQILADTPPEASFLIIEAGDI
HCCCCHHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
KKGTGLRKIAEPARSIAAIPCYADDARSLNALIDQELSANNLRIAPAARQRLIEQLGGDR
CCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCC
IASRNEIRKLALYCLGADVIEEDDILAIIGDASTVSADDAVDAILKGDRNAFFHATQKII
CCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
SSKTPIFLVLQGCLKQFQLLDQMRAEMDEKKQQAGQVMQTLGRHIHFRRKPIIERALRTW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
QPAAIAREMNRLQAAILQSRQRQSLEESVALLTLLSTTLQSGRGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA