Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159185360

Identifier: 159185360

GI number: 159185360

Start: 2748783

End: 2749274

Strand: Direct

Name: 159185360

Synonym: Atu2749

Alternate gene names: NA

Gene position: 2748783-2749274 (Clockwise)

Preceding gene: 15889997

Following gene: 15889999

Centisome position: 96.73

GC content: 63.41

Gene sequence:

>492_bases
ATGATGGCTGGTCTTCTGGCGGGCTGCCAGGTGCGCCCGCTTTATGGCGAAGCTTCCGGAACCAAGGAAAGGCTGGCGGC
CGTCAGCGTCTCCCAGATCGGCGGTCGGGCTGGGCTGGAAGTACGCAACCAGCTGATCTTCCTGATGTCCGGCGGTGCCG
GAGAACCGGCCACGGCGCAATATAATGTCAAGATTGCCGTAAGCTCGAGCGCCACGACCACAGAGGTGCAGAACTACGAT
CTGACGACCCGCGCGAACAACAATTACGACGGTCCTTATCCCGGCCGTGTCGTGATGACTGGTCAATATGTCCTGACGCG
CGTCTCGGACGGTCAGATCCTGCGCTCCGCACGCCGCAGCGTGACGGCGCAGGTGGATCTGCCGCAGCAGGAATTCGCCA
AGATCCGGGCGATCCGCGACGCCGAAAACCGTGCGGCCCGCGAGCTGGCTGAAATCATCCGCACCGATATCGCCGCCACC
CTCGGCCGCTGA

Upstream 100 bases:

>100_bases
GAGCCCAAGAAAGTCATCGTGGTTCCGCAGAGGATTGTGAACATTGTTGTCTGACGTTTTTTCGAGATGGAGCCGCGTTG
CGGCAGCAATTTCCGTCGTG

Downstream 100 bases:

>100_bases
GAGCGGCGGCCGTGGCGGAGATAAAGTCCCATGAGTTCGAGCGCTTCGCCGAAAATCCGGCGGAGCGCTTTCGCGTTTTT
GTGCTCTATGGACCGGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MMAGLLAGCQVRPLYGEASGTKERLAAVSVSQIGGRAGLEVRNQLIFLMSGGAGEPATAQYNVKIAVSSSATTTEVQNYD
LTTRANNNYDGPYPGRVVMTGQYVLTRVSDGQILRSARRSVTAQVDLPQQEFAKIRAIRDAENRAARELAEIIRTDIAAT
LGR

Sequences:

>Translated_163_residues
MMAGLLAGCQVRPLYGEASGTKERLAAVSVSQIGGRAGLEVRNQLIFLMSGGAGEPATAQYNVKIAVSSSATTTEVQNYD
LTTRANNNYDGPYPGRVVMTGQYVLTRVSDGQILRSARRSVTAQVDLPQQEFAKIRAIRDAENRAARELAEIIRTDIAAT
LGR
>Mature_163_residues
MMAGLLAGCQVRPLYGEASGTKERLAAVSVSQIGGRAGLEVRNQLIFLMSGGAGEPATAQYNVKIAVSSSATTTEVQNYD
LTTRANNNYDGPYPGRVVMTGQYVLTRVSDGQILRSARRSVTAQVDLPQQEFAKIRAIRDAENRAARELAEIIRTDIAAT
LGR

Specific function: Unknown

COG id: COG5468

COG function: function code S; Predicted secreted (periplasmic) protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17503; Mature: 17503

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAGLLAGCQVRPLYGEASGTKERLAAVSVSQIGGRAGLEVRNQLIFLMSGGAGEPATAQ
CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECEEEEEEECCCCCCCCEE
YNVKIAVSSSATTTEVQNYDLTTRANNNYDGPYPGRVVMTGQYVLTRVSDGQILRSARRS
EEEEEEEECCCCEEEEECCEEEECCCCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHC
VTAQVDLPQQEFAKIRAIRDAENRAARELAEIIRTDIAATLGR
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMAGLLAGCQVRPLYGEASGTKERLAAVSVSQIGGRAGLEVRNQLIFLMSGGAGEPATAQ
CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECEEEEEEECCCCCCCCEE
YNVKIAVSSSATTTEVQNYDLTTRANNNYDGPYPGRVVMTGQYVLTRVSDGQILRSARRS
EEEEEEEECCCCEEEEECCEEEECCCCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHC
VTAQVDLPQQEFAKIRAIRDAENRAARELAEIIRTDIAATLGR
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA