Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185360
Identifier: 159185360
GI number: 159185360
Start: 2748783
End: 2749274
Strand: Direct
Name: 159185360
Synonym: Atu2749
Alternate gene names: NA
Gene position: 2748783-2749274 (Clockwise)
Preceding gene: 15889997
Following gene: 15889999
Centisome position: 96.73
GC content: 63.41
Gene sequence:
>492_bases ATGATGGCTGGTCTTCTGGCGGGCTGCCAGGTGCGCCCGCTTTATGGCGAAGCTTCCGGAACCAAGGAAAGGCTGGCGGC CGTCAGCGTCTCCCAGATCGGCGGTCGGGCTGGGCTGGAAGTACGCAACCAGCTGATCTTCCTGATGTCCGGCGGTGCCG GAGAACCGGCCACGGCGCAATATAATGTCAAGATTGCCGTAAGCTCGAGCGCCACGACCACAGAGGTGCAGAACTACGAT CTGACGACCCGCGCGAACAACAATTACGACGGTCCTTATCCCGGCCGTGTCGTGATGACTGGTCAATATGTCCTGACGCG CGTCTCGGACGGTCAGATCCTGCGCTCCGCACGCCGCAGCGTGACGGCGCAGGTGGATCTGCCGCAGCAGGAATTCGCCA AGATCCGGGCGATCCGCGACGCCGAAAACCGTGCGGCCCGCGAGCTGGCTGAAATCATCCGCACCGATATCGCCGCCACC CTCGGCCGCTGA
Upstream 100 bases:
>100_bases GAGCCCAAGAAAGTCATCGTGGTTCCGCAGAGGATTGTGAACATTGTTGTCTGACGTTTTTTCGAGATGGAGCCGCGTTG CGGCAGCAATTTCCGTCGTG
Downstream 100 bases:
>100_bases GAGCGGCGGCCGTGGCGGAGATAAAGTCCCATGAGTTCGAGCGCTTCGCCGAAAATCCGGCGGAGCGCTTTCGCGTTTTT GTGCTCTATGGACCGGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MMAGLLAGCQVRPLYGEASGTKERLAAVSVSQIGGRAGLEVRNQLIFLMSGGAGEPATAQYNVKIAVSSSATTTEVQNYD LTTRANNNYDGPYPGRVVMTGQYVLTRVSDGQILRSARRSVTAQVDLPQQEFAKIRAIRDAENRAARELAEIIRTDIAAT LGR
Sequences:
>Translated_163_residues MMAGLLAGCQVRPLYGEASGTKERLAAVSVSQIGGRAGLEVRNQLIFLMSGGAGEPATAQYNVKIAVSSSATTTEVQNYD LTTRANNNYDGPYPGRVVMTGQYVLTRVSDGQILRSARRSVTAQVDLPQQEFAKIRAIRDAENRAARELAEIIRTDIAAT LGR >Mature_163_residues MMAGLLAGCQVRPLYGEASGTKERLAAVSVSQIGGRAGLEVRNQLIFLMSGGAGEPATAQYNVKIAVSSSATTTEVQNYD LTTRANNNYDGPYPGRVVMTGQYVLTRVSDGQILRSARRSVTAQVDLPQQEFAKIRAIRDAENRAARELAEIIRTDIAAT LGR
Specific function: Unknown
COG id: COG5468
COG function: function code S; Predicted secreted (periplasmic) protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17503; Mature: 17503
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAGLLAGCQVRPLYGEASGTKERLAAVSVSQIGGRAGLEVRNQLIFLMSGGAGEPATAQ CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECEEEEEEECCCCCCCCEE YNVKIAVSSSATTTEVQNYDLTTRANNNYDGPYPGRVVMTGQYVLTRVSDGQILRSARRS EEEEEEEECCCCEEEEECCEEEECCCCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHC VTAQVDLPQQEFAKIRAIRDAENRAARELAEIIRTDIAATLGR EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMAGLLAGCQVRPLYGEASGTKERLAAVSVSQIGGRAGLEVRNQLIFLMSGGAGEPATAQ CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECEEEEEEECCCCCCCCEE YNVKIAVSSSATTTEVQNYDLTTRANNNYDGPYPGRVVMTGQYVLTRVSDGQILRSARRS EEEEEEEECCCCEEEEECCEEEECCCCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHC VTAQVDLPQQEFAKIRAIRDAENRAARELAEIIRTDIAATLGR EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA