Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is malG [H]
Identifier: 15889859
GI number: 15889859
Start: 2581533
End: 2582390
Strand: Reverse
Name: malG [H]
Synonym: Atu2602
Alternate gene names: 15889859
Gene position: 2582390-2581533 (Counterclockwise)
Preceding gene: 15889860
Following gene: 15889858
Centisome position: 90.88
GC content: 57.93
Gene sequence:
>858_bases ATGACCGACAGACATGCGAGGATCAACCGCTACACCTGGTATGAAATGGTCGGAATCTATTGCGGTATCGCCGTGTTCCT GGCCTTCGTGCTGGCGCCCTTCGTCGAAGGCTTTCTGGTGTCGCTGAAGCCGCTCAGCCTGCTGTTTTCTTCACCCTACA GGTTCTGGCCGGAGAACGGTTCCTTCGAGGCCTACCGGACGATGTGGGTGAGCGTGCCGGGTTTCGCGCTTTATATTTTC AATTCGTTCTTCATTGCGGGTTCGATCACCCTGATCGTGCTTGTGCTCGTCATTCCCGCCTCCTATGCCTTCGCGCGTTT CGAGTTCAGGGGAGCCGGCCTGTTGCTCGGAATATTCCTTGCGGTGAAGATGTTCTCCGGCGCGGTGCTGCTCATCCCGC TGTTTCGGTTGATGCGGTCCATCGGGGTGCTGAACACCTATTTCGCGATGATCATTCCCGGTGTCGCTTTCATCATCCCC ACAGGCATCCTGCTTCTCGTGACCTATATGCGCCGTATCCCGCGGGAGTTGGAGGAAGCGGCCTATGTGGATGGGGCGAG CAGGCTCTATACGCTTCGCAGGGTAGTTTTGCCGATCGCAACCCCGGGCATTGCCGTTGTCGCGATCTCCTCCTTCATCG AGGCCTATGCGCAGCAATTCATCTACGCGCTGACCTTCAACTCAAAGACGGAATACATGCCACTGCCGGTGGGGCTCTTT GCCTATTTCGGCCGGCAGGAGGTCGTCTGGAACGAACTGATGGCGGCGAGCTTCGTGGGCATCGCACCGGCGATGATCGC GATCTTCCTGATGCAACGATATCTCGTCGGCGGGCTGACCGCCGGCGCGGTGAAATAA
Upstream 100 bases:
>100_bases GTGAAGGTGCAGCGCGCGCGGTGCTCATCTGCATCTTCCTGTCGATCTTCACCTTCTTCTATTTCCGCATCACCCGCCGT TTCTCGCAGGAGGCCACGCG
Downstream 100 bases:
>100_bases GCAATAACCGGAACGACTACCAAAACGGGAGACTAAATATGGCACTGAAACATTACGGATTGGCGCTCTGCGCTTTCGCA TTTGCCGGTTCCACCGCCCT
Product: ABC transporter, membrane spanning protein (maltose)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTDRHARINRYTWYEMVGIYCGIAVFLAFVLAPFVEGFLVSLKPLSLLFSSPYRFWPENGSFEAYRTMWVSVPGFALYIF NSFFIAGSITLIVLVLVIPASYAFARFEFRGAGLLLGIFLAVKMFSGAVLLIPLFRLMRSIGVLNTYFAMIIPGVAFIIP TGILLLVTYMRRIPRELEEAAYVDGASRLYTLRRVVLPIATPGIAVVAISSFIEAYAQQFIYALTFNSKTEYMPLPVGLF AYFGRQEVVWNELMAASFVGIAPAMIAIFLMQRYLVGGLTAGAVK
Sequences:
>Translated_285_residues MTDRHARINRYTWYEMVGIYCGIAVFLAFVLAPFVEGFLVSLKPLSLLFSSPYRFWPENGSFEAYRTMWVSVPGFALYIF NSFFIAGSITLIVLVLVIPASYAFARFEFRGAGLLLGIFLAVKMFSGAVLLIPLFRLMRSIGVLNTYFAMIIPGVAFIIP TGILLLVTYMRRIPRELEEAAYVDGASRLYTLRRVVLPIATPGIAVVAISSFIEAYAQQFIYALTFNSKTEYMPLPVGLF AYFGRQEVVWNELMAASFVGIAPAMIAIFLMQRYLVGGLTAGAVK >Mature_284_residues TDRHARINRYTWYEMVGIYCGIAVFLAFVLAPFVEGFLVSLKPLSLLFSSPYRFWPENGSFEAYRTMWVSVPGFALYIFN SFFIAGSITLIVLVLVIPASYAFARFEFRGAGLLLGIFLAVKMFSGAVLLIPLFRLMRSIGVLNTYFAMIIPGVAFIIPT GILLLVTYMRRIPRELEEAAYVDGASRLYTLRRVVLPIATPGIAVVAISSFIEAYAQQFIYALTFNSKTEYMPLPVGLFA YFGRQEVVWNELMAASFVGIAPAMIAIFLMQRYLVGGLTAGAVK
Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=270, Percent_Identity=34.0740740740741, Blast_Score=144, Evalue=8e-36, Organism=Escherichia coli, GI1790464, Length=219, Percent_Identity=36.0730593607306, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1789860, Length=260, Percent_Identity=23.8461538461538, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31818; Mature: 31687
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRHARINRYTWYEMVGIYCGIAVFLAFVLAPFVEGFLVSLKPLSLLFSSPYRFWPENG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SFEAYRTMWVSVPGFALYIFNSFFIAGSITLIVLVLVIPASYAFARFEFRGAGLLLGIFL CCHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AVKMFSGAVLLIPLFRLMRSIGVLNTYFAMIIPGVAFIIPTGILLLVTYMRRIPRELEEA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYVDGASRLYTLRRVVLPIATPGIAVVAISSFIEAYAQQFIYALTFNSKTEYMPLPVGLF HHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHH AYFGRQEVVWNELMAASFVGIAPAMIAIFLMQRYLVGGLTAGAVK HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TDRHARINRYTWYEMVGIYCGIAVFLAFVLAPFVEGFLVSLKPLSLLFSSPYRFWPENG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SFEAYRTMWVSVPGFALYIFNSFFIAGSITLIVLVLVIPASYAFARFEFRGAGLLLGIFL CCHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AVKMFSGAVLLIPLFRLMRSIGVLNTYFAMIIPGVAFIIPTGILLLVTYMRRIPRELEEA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYVDGASRLYTLRRVVLPIATPGIAVVAISSFIEAYAQQFIYALTFNSKTEYMPLPVGLF HHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHH AYFGRQEVVWNELMAASFVGIAPAMIAIFLMQRYLVGGLTAGAVK HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]