Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is malE [C]

Identifier: 15889858

GI number: 15889858

Start: 2580262

End: 2581494

Strand: Reverse

Name: malE [C]

Synonym: Atu2601

Alternate gene names: 15889858

Gene position: 2581494-2580262 (Counterclockwise)

Preceding gene: 15889859

Following gene: 15889857

Centisome position: 90.85

GC content: 58.8

Gene sequence:

>1233_bases
ATGGCACTGAAACATTACGGATTGGCGCTCTGCGCTTTCGCATTTGCCGGTTCCACCGCCCTTGGCACGGTGGTGGCACA
TGCCGCCGACAAGGAGATCAGCTGGATCTATTGCGGCGACAAGATGGACCCCATCCATGAAAAATACATCAAGGAATGGG
AAGGCAAGAACGCAGGCTGGAAAGTCGTGCCTGAGGTTGTCGGCTGGGAGCAATGCCAGGACAAGGCCACCACGCTTGCA
GCCGCCGGCACGCCGGTTTCCATGGCCTATGTCGGTTCGCGCACGCTGAAGCAGTTCGCGCAGAACGATCTGATCGTTCC
GGTGCCGATGACCGAAGACGAAAAGAAAACCTATTACCCCAACATCGTCGACACGGTCACCTTCGAGGACACGCAATGGG
GTGTGCCGGTCGCTTTCTCGACCAAGGCGCTCTACTGGAACAAGGACCTGTTCAAGCAGGCCGGTCTCGATCCGGAAACG
CCGCCGAAGACCTGGGCTGAAGAGATCGCCTTTGCCAAGCAGATCAAGGAAAAGACCGGTATCGCCGGTTACGGCCTGCC
CGCCAAGACCTTCGACAACACCATGCACCAGTTCATGCACTGGGTTTACACCAATAACGGCAAGGTCATCGATGGCGACA
AGATCACCGTCGACAGCCCGCAGGTTCTTGCAGCCCTGAAGGCATACAAGGACATCACGCCTTACTCCGTTGAAGGTCCG
ACGGCCTATGAGCAGAATGAAATCCGCGCCATCTTCCTCGATGGCAAGGTCGGCATGATCCAGGCCGGTTCGGGTGCTGC
AACCCGTCTGCAGGCAACGAAGATCAACTGGGGCATCGCAACCCTGCCGCTTGGCCCTGAAGCCAAGGGTCCCGGCACGC
TGCTCATCACCGACAGCCTCGCCATCTTCAAGGGAACCGGCGTGGAAGAAAAGGCGACCGAATTCGCCAAGTTCATCACC
TCTCCCGGCCCGCAGGGCGAATACGAGTTGCAGGGCGGCGCTGGTCTCACCCCGCTTCGTCCGTCGCCGAAGGTTGATGA
GTTCATCGCCAAGGATCCCTTCTGGAAGCCGCTGATCGACGGTATCGCCTACGGTGGTCCCGAGCCGCTCTTCACCGACT
ACAAGGGCTTCCAGGACGTGATGATCGAGATGGTGCAGTCTGTCGTGACCGGCAAGGCAACACCGGAAGATGCGGCAAAG
AAGGCATCCGCCGCTCTCGAGCAGTACAAATAA

Upstream 100 bases:

>100_bases
TCGCGATCTTCCTGATGCAACGATATCTCGTCGGCGGGCTGACCGCCGGCGCGGTGAAATAAGCAATAACCGGAACGACT
ACCAAAACGGGAGACTAAAT

Downstream 100 bases:

>100_bases
TTCCTCATGAATACGGATGCGGGCGCAAGGCCGCCCGCATCCGGTCAATTTCGCCGCGGGAATTCCTGCGCTCTTTCTGG
CGCTCCCTCCCGTGTCTTTC

Product: ABC transporter, substrate binding protein (maltose)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MALKHYGLALCAFAFAGSTALGTVVAHAADKEISWIYCGDKMDPIHEKYIKEWEGKNAGWKVVPEVVGWEQCQDKATTLA
AAGTPVSMAYVGSRTLKQFAQNDLIVPVPMTEDEKKTYYPNIVDTVTFEDTQWGVPVAFSTKALYWNKDLFKQAGLDPET
PPKTWAEEIAFAKQIKEKTGIAGYGLPAKTFDNTMHQFMHWVYTNNGKVIDGDKITVDSPQVLAALKAYKDITPYSVEGP
TAYEQNEIRAIFLDGKVGMIQAGSGAATRLQATKINWGIATLPLGPEAKGPGTLLITDSLAIFKGTGVEEKATEFAKFIT
SPGPQGEYELQGGAGLTPLRPSPKVDEFIAKDPFWKPLIDGIAYGGPEPLFTDYKGFQDVMIEMVQSVVTGKATPEDAAK
KASAALEQYK

Sequences:

>Translated_410_residues
MALKHYGLALCAFAFAGSTALGTVVAHAADKEISWIYCGDKMDPIHEKYIKEWEGKNAGWKVVPEVVGWEQCQDKATTLA
AAGTPVSMAYVGSRTLKQFAQNDLIVPVPMTEDEKKTYYPNIVDTVTFEDTQWGVPVAFSTKALYWNKDLFKQAGLDPET
PPKTWAEEIAFAKQIKEKTGIAGYGLPAKTFDNTMHQFMHWVYTNNGKVIDGDKITVDSPQVLAALKAYKDITPYSVEGP
TAYEQNEIRAIFLDGKVGMIQAGSGAATRLQATKINWGIATLPLGPEAKGPGTLLITDSLAIFKGTGVEEKATEFAKFIT
SPGPQGEYELQGGAGLTPLRPSPKVDEFIAKDPFWKPLIDGIAYGGPEPLFTDYKGFQDVMIEMVQSVVTGKATPEDAAK
KASAALEQYK
>Mature_409_residues
ALKHYGLALCAFAFAGSTALGTVVAHAADKEISWIYCGDKMDPIHEKYIKEWEGKNAGWKVVPEVVGWEQCQDKATTLAA
AGTPVSMAYVGSRTLKQFAQNDLIVPVPMTEDEKKTYYPNIVDTVTFEDTQWGVPVAFSTKALYWNKDLFKQAGLDPETP
PKTWAEEIAFAKQIKEKTGIAGYGLPAKTFDNTMHQFMHWVYTNNGKVIDGDKITVDSPQVLAALKAYKDITPYSVEGPT
AYEQNEIRAIFLDGKVGMIQAGSGAATRLQATKINWGIATLPLGPEAKGPGTLLITDSLAIFKGTGVEEKATEFAKFITS
PGPQGEYELQGGAGLTPLRPSPKVDEFIAKDPFWKPLIDGIAYGGPEPLFTDYKGFQDVMIEMVQSVVTGKATPEDAAKK
ASAALEQYK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=289, Percent_Identity=26.643598615917, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787569, Length=223, Percent_Identity=26.0089686098655, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44652; Mature: 44521

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKHYGLALCAFAFAGSTALGTVVAHAADKEISWIYCGDKMDPIHEKYIKEWEGKNAGW
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCC
KVVPEVVGWEQCQDKATTLAAAGTPVSMAYVGSRTLKQFAQNDLIVPVPMTEDEKKTYYP
EECHHHHCHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
NIVDTVTFEDTQWGVPVAFSTKALYWNKDLFKQAGLDPETPPKTWAEEIAFAKQIKEKTG
CCEEEEEECCCCCCCCEEEECEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
IAGYGLPAKTFDNTMHQFMHWVYTNNGKVIDGDKITVDSPQVLAALKAYKDITPYSVEGP
CCCCCCCHHHHHHHHHHHHHHEECCCCEEECCCEEEECCHHHHHHHHHHHCCCCCCCCCC
TAYEQNEIRAIFLDGKVGMIQAGSGAATRLQATKINWGIATLPLGPEAKGPGTLLITDSL
CCCCCCCEEEEEECCCEEEEECCCCCCEEEEEEEECCCEEECCCCCCCCCCCEEEEECCE
AIFKGTGVEEKATEFAKFITSPGPQGEYELQGGAGLTPLRPSPKVDEFIAKDPFWKPLID
EEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHH
GIAYGGPEPLFTDYKGFQDVMIEMVQSVVTGKATPEDAAKKASAALEQYK
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALKHYGLALCAFAFAGSTALGTVVAHAADKEISWIYCGDKMDPIHEKYIKEWEGKNAGW
CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCC
KVVPEVVGWEQCQDKATTLAAAGTPVSMAYVGSRTLKQFAQNDLIVPVPMTEDEKKTYYP
EECHHHHCHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
NIVDTVTFEDTQWGVPVAFSTKALYWNKDLFKQAGLDPETPPKTWAEEIAFAKQIKEKTG
CCEEEEEECCCCCCCCEEEECEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
IAGYGLPAKTFDNTMHQFMHWVYTNNGKVIDGDKITVDSPQVLAALKAYKDITPYSVEGP
CCCCCCCHHHHHHHHHHHHHHEECCCCEEECCCEEEECCHHHHHHHHHHHCCCCCCCCCC
TAYEQNEIRAIFLDGKVGMIQAGSGAATRLQATKINWGIATLPLGPEAKGPGTLLITDSL
CCCCCCCEEEEEECCCEEEEECCCCCCEEEEEEEECCCEEECCCCCCCCCCCEEEEECCE
AIFKGTGVEEKATEFAKFITSPGPQGEYELQGGAGLTPLRPSPKVDEFIAKDPFWKPLID
EEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHH
GIAYGGPEPLFTDYKGFQDVMIEMVQSVVTGKATPEDAAKKASAALEQYK
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA