Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889833
Identifier: 15889833
GI number: 15889833
Start: 2547876
End: 2549735
Strand: Reverse
Name: 15889833
Synonym: Atu2576
Alternate gene names: NA
Gene position: 2549735-2547876 (Counterclockwise)
Preceding gene: 159185444
Following gene: 159185271
Centisome position: 89.73
GC content: 60.43
Gene sequence:
>1860_bases ATGGTTGAGCCGGATACTGGCGCAATGATGGCAAGGTCGATGGCGATAGATATCTCAGAGCGTACAGGCAGCGATCCATC TCTTGATGCATTGTCGCTTTCCGGCATCGGCCTGGATGGGGCGATTGCACATCCCGTCTCTTTTGACGGGCTAGCTGGAA TTTTCCATCCCGCACGCAGGGATGTGAGGCAGGCCCATGCCGTTCTTTTCGTCAGTCCCTGGGGCATGGAGGAGCTGTGC AGCCGCAAGTTTCAGCGGGTTCTGGCCGAGAGGTTGGCGGCTCGCGGCGTTGCGAGCCTGCGATTTGACTATCTCGGCGC GGGTGATGCCTTCGATCCTGAAGATGCGGGTCGTGTAGCGGACTGGCTTTCCGACACGCGTGCTGCATTCGCTTATCTGA AGCGTCTTTCCGGATGCGCGGAGGTGATGGTCGTTGCGCAGGGGCTCGGCTGCCTGATCGCGGCGCAGGCCCTTACCGAT GCAGTGGGTGCCGGTTCCATGGCGTTTCTGGCGCCTGTCGTTTCCGGCCGTGCCTATCTGCGCGAACTGGCGATGTGGTC ATCCATGATCGATGACGGCCTTGGCCTCCGGCCCGGTCAACGTCTCGCGGAGGCGGGAGCGATTGCGGGCATGACCATGC CTGAAGGTGTTGCGGATGCGGTAAAGAAGACCAATCTTGCCAATCTCGCGGCCGCTCCGGCGCACACCATTCTGGTCCTG TCGCGACCCGGTCGCGTGACCGATGCCGATTTCGCCAAACATCTCGCTGCAATCGGCTGTGAGGTGGAGGAGGCAGCGTT TTCCGGCTATGACGATCTCGTTTCCAGCCCCACACTCTCGAAAATTTCAGGTGATGTGGTGAACCGGCTGGTGGATTGGG TTCTGTCTCAAACCCATGCCGAAAGCCCCGCCAATACCGGGGAGGATATCATCCTCAATGCCCCGCAGCGCGGCCGTGGT TTCATCGAGCAGTCGGTGCAGTTTGGCGATGGCGGGCGGCTCTTCGGTGTCTTCTGTCGGCCGCATGACCGAGAGGCAGT GTCTTCGGTTCTCCTGCTTGGCGCCGCTTACGACCGGCATGCGGGCTGGGGCAGGCTTTCCGTGCAGATGGCACGTACTT TGGCGCGCGAAGGCGTTGCCTCATTGCGCTTCGACGCTGCAAATATTGCCGATAGTCCGCCCGTCAAAAACGCACCCGAT CAGGTTCTTTACGATGCCGCGCAGAATGACGACGTGGCCGCCGCGCTCGATTTTCTCGGCACGCGCGGCAAGGGGCCTTT CATCGCGGCGGGCCGGTGCAGCGGCGCCTATCTCGCTTTTAATGGCGCGCTCGCCGATGACCGGATCGGTGCCGTGATCG CGGTCAATCCAGTTGTTTTCCACTGGCGCAAAGGGCTTTCGGTGGACGAGGCGCTGCATAAACGGCCGCGTTCCTTCGGG GAATACAGCCAGCGTTTTCGCCAGGGTGCGACATTCAAGCGTCTCATCAGCGGCGATGTCGATGTGGCAAGCGCCGGGCT AAACATCCTCAAGGCGACGATGAAGCGGCTTTCGACAAAAACGGCAAGGTTGTTTCGCAGGGGCAGCGAGGAAGGGCGGG CCGTCTTCGGCGCTTTCGACAGGCTGAAGGCGAAGAATACCGCCGTCCATCTGCTCTATAGCGACAACGACGATGGCCTC GAGCATTTCCAGTATTATTTCGATGCCGACGGTGACGGGCTGGCGGCCTATCGCAACGTATCGCTGACCATCATTCCCGA TGCCGATCACAATCTCTCAACACCGGAAGCGAAGACAATCTATATCGAAACGGTGAAGCGGCTGGCTCTAGAACGAAAAC CGCCGGCTGGAGCCCAGTGA
Upstream 100 bases:
>100_bases TGGCTGGCGATATAAATACGACTATATTTTTAGAGTTCTCTAATATTGTTGTTTTTATTGTAGAACAGGCGTTAAGACGC TTCGATATAATGATCCCGTA
Downstream 100 bases:
>100_bases CACGACCTCTCCGGAGGGAGGGGCTTCGGTTGTGGCGGTCTCCGGTAAAAGGCCGATTTTTCTGGCCTCGCCAGGGCCGA GATGGAACCAGCTTTCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Superfamily Hydrolase; Alpha/Beta Hydrolase; Hydrolase Of Alpha/Beta Superfamily; Hydrolase; Transmembrane Teichuronic Acid Biosynthesis Protein; Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MVEPDTGAMMARSMAIDISERTGSDPSLDALSLSGIGLDGAIAHPVSFDGLAGIFHPARRDVRQAHAVLFVSPWGMEELC SRKFQRVLAERLAARGVASLRFDYLGAGDAFDPEDAGRVADWLSDTRAAFAYLKRLSGCAEVMVVAQGLGCLIAAQALTD AVGAGSMAFLAPVVSGRAYLRELAMWSSMIDDGLGLRPGQRLAEAGAIAGMTMPEGVADAVKKTNLANLAAAPAHTILVL SRPGRVTDADFAKHLAAIGCEVEEAAFSGYDDLVSSPTLSKISGDVVNRLVDWVLSQTHAESPANTGEDIILNAPQRGRG FIEQSVQFGDGGRLFGVFCRPHDREAVSSVLLLGAAYDRHAGWGRLSVQMARTLAREGVASLRFDAANIADSPPVKNAPD QVLYDAAQNDDVAAALDFLGTRGKGPFIAAGRCSGAYLAFNGALADDRIGAVIAVNPVVFHWRKGLSVDEALHKRPRSFG EYSQRFRQGATFKRLISGDVDVASAGLNILKATMKRLSTKTARLFRRGSEEGRAVFGAFDRLKAKNTAVHLLYSDNDDGL EHFQYYFDADGDGLAAYRNVSLTIIPDADHNLSTPEAKTIYIETVKRLALERKPPAGAQ
Sequences:
>Translated_619_residues MVEPDTGAMMARSMAIDISERTGSDPSLDALSLSGIGLDGAIAHPVSFDGLAGIFHPARRDVRQAHAVLFVSPWGMEELC SRKFQRVLAERLAARGVASLRFDYLGAGDAFDPEDAGRVADWLSDTRAAFAYLKRLSGCAEVMVVAQGLGCLIAAQALTD AVGAGSMAFLAPVVSGRAYLRELAMWSSMIDDGLGLRPGQRLAEAGAIAGMTMPEGVADAVKKTNLANLAAAPAHTILVL SRPGRVTDADFAKHLAAIGCEVEEAAFSGYDDLVSSPTLSKISGDVVNRLVDWVLSQTHAESPANTGEDIILNAPQRGRG FIEQSVQFGDGGRLFGVFCRPHDREAVSSVLLLGAAYDRHAGWGRLSVQMARTLAREGVASLRFDAANIADSPPVKNAPD QVLYDAAQNDDVAAALDFLGTRGKGPFIAAGRCSGAYLAFNGALADDRIGAVIAVNPVVFHWRKGLSVDEALHKRPRSFG EYSQRFRQGATFKRLISGDVDVASAGLNILKATMKRLSTKTARLFRRGSEEGRAVFGAFDRLKAKNTAVHLLYSDNDDGL EHFQYYFDADGDGLAAYRNVSLTIIPDADHNLSTPEAKTIYIETVKRLALERKPPAGAQ >Mature_619_residues MVEPDTGAMMARSMAIDISERTGSDPSLDALSLSGIGLDGAIAHPVSFDGLAGIFHPARRDVRQAHAVLFVSPWGMEELC SRKFQRVLAERLAARGVASLRFDYLGAGDAFDPEDAGRVADWLSDTRAAFAYLKRLSGCAEVMVVAQGLGCLIAAQALTD AVGAGSMAFLAPVVSGRAYLRELAMWSSMIDDGLGLRPGQRLAEAGAIAGMTMPEGVADAVKKTNLANLAAAPAHTILVL SRPGRVTDADFAKHLAAIGCEVEEAAFSGYDDLVSSPTLSKISGDVVNRLVDWVLSQTHAESPANTGEDIILNAPQRGRG FIEQSVQFGDGGRLFGVFCRPHDREAVSSVLLLGAAYDRHAGWGRLSVQMARTLAREGVASLRFDAANIADSPPVKNAPD QVLYDAAQNDDVAAALDFLGTRGKGPFIAAGRCSGAYLAFNGALADDRIGAVIAVNPVVFHWRKGLSVDEALHKRPRSFG EYSQRFRQGATFKRLISGDVDVASAGLNILKATMKRLSTKTARLFRRGSEEGRAVFGAFDRLKAKNTAVHLLYSDNDDGL EHFQYYFDADGDGLAAYRNVSLTIIPDADHNLSTPEAKTIYIETVKRLALERKPPAGAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66107; Mature: 66107
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEPDTGAMMARSMAIDISERTGSDPSLDALSLSGIGLDGAIAHPVSFDGLAGIFHPARR CCCCCCHHHHHHHHEEEEHHCCCCCCCCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHH DVRQAHAVLFVSPWGMEELCSRKFQRVLAERLAARGVASLRFDYLGAGDAFDPEDAGRVA HHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCCCCHHHHHHH DWLSDTRAAFAYLKRLSGCAEVMVVAQGLGCLIAAQALTDAVGAGSMAFLAPVVSGRAYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RELAMWSSMIDDGLGLRPGQRLAEAGAIAGMTMPEGVADAVKKTNLANLAAAPAHTILVL HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHCCCCEEEEEE SRPGRVTDADFAKHLAAIGCEVEEAAFSGYDDLVSSPTLSKISGDVVNRLVDWVLSQTHA ECCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC ESPANTGEDIILNAPQRGRGFIEQSVQFGDGGRLFGVFCRPHDREAVSSVLLLGAAYDRH CCCCCCCCCEEEECCHHCCCHHHHHCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCC AGWGRLSVQMARTLAREGVASLRFDAANIADSPPVKNAPDQVLYDAAQNDDVAAALDFLG CCCCHHHHHHHHHHHHHCHHHHEECHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHC TRGKGPFIAAGRCSGAYLAFNGALADDRIGAVIAVNPVVFHWRKGLSVDEALHKRPRSFG CCCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECHHHEEHHCCCCHHHHHHHCCCCHH EYSQRFRQGATFKRLISGDVDVASAGLNILKATMKRLSTKTARLFRRGSEEGRAVFGAFD HHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH RLKAKNTAVHLLYSDNDDGLEHFQYYFDADGDGLAAYRNVSLTIIPDADHNLSTPEAKTI HHCCCCCEEEEEECCCCCCHHHHHEEECCCCCCEEEEECEEEEEEECCCCCCCCCCCCEE YIETVKRLALERKPPAGAQ HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MVEPDTGAMMARSMAIDISERTGSDPSLDALSLSGIGLDGAIAHPVSFDGLAGIFHPARR CCCCCCHHHHHHHHEEEEHHCCCCCCCCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHH DVRQAHAVLFVSPWGMEELCSRKFQRVLAERLAARGVASLRFDYLGAGDAFDPEDAGRVA HHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCCCCHHHHHHH DWLSDTRAAFAYLKRLSGCAEVMVVAQGLGCLIAAQALTDAVGAGSMAFLAPVVSGRAYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RELAMWSSMIDDGLGLRPGQRLAEAGAIAGMTMPEGVADAVKKTNLANLAAAPAHTILVL HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHCCCCEEEEEE SRPGRVTDADFAKHLAAIGCEVEEAAFSGYDDLVSSPTLSKISGDVVNRLVDWVLSQTHA ECCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC ESPANTGEDIILNAPQRGRGFIEQSVQFGDGGRLFGVFCRPHDREAVSSVLLLGAAYDRH CCCCCCCCCEEEECCHHCCCHHHHHCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCC AGWGRLSVQMARTLAREGVASLRFDAANIADSPPVKNAPDQVLYDAAQNDDVAAALDFLG CCCCHHHHHHHHHHHHHCHHHHEECHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHC TRGKGPFIAAGRCSGAYLAFNGALADDRIGAVIAVNPVVFHWRKGLSVDEALHKRPRSFG CCCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECHHHEEHHCCCCHHHHHHHCCCCHH EYSQRFRQGATFKRLISGDVDVASAGLNILKATMKRLSTKTARLFRRGSEEGRAVFGAFD HHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH RLKAKNTAVHLLYSDNDDGLEHFQYYFDADGDGLAAYRNVSLTIIPDADHNLSTPEAKTI HHCCCCCEEEEEECCCCCCHHHHHEEECCCCCCEEEEECEEEEEEECCCCCCCCCCCCEE YIETVKRLALERKPPAGAQ HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA