Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889717
Identifier: 15889717
GI number: 15889717
Start: 2416527
End: 2418863
Strand: Reverse
Name: 15889717
Synonym: Atu2446
Alternate gene names: NA
Gene position: 2418863-2416527 (Counterclockwise)
Preceding gene: 15889718
Following gene: 15889713
Centisome position: 85.12
GC content: 63.59
Gene sequence:
>2337_bases GTGCTTATGGCGGATTTTGTAGCAGTCATTCGCAAGGCCGTGGATGGCTTGGCGAACAATACTCCCGAAAATCGGGCGAA GGTTTACGACAAGGCGCGCAGTGCGGTTGTGCGCCAACTCGAGAATATGAAGCCACGTCCGCCGGAAGAATTGTTGCGCC GGCAGATCGCCAAGCTGGACGCCGCCATTGCCGAGGTGGACAGCGAATATGCCGAGGCGCTACCGGCGCTCACCGAGGAT GACGCTTTCTCTCCGGTGGCCGAAGAGACGGCGGCATCCTATGAGCATCAGGATGCCGTCGATGAGCCGGCTGCCCATGC CGCCGAAGCCGAGCACGACGTCGAACCGGAACAGCCTGCCCATCGCGAAGAGGCGCAGCACGAACCGGTTTATGAAGAAC CTGCATCCGCTGAGCCGGAACCGGTTTACGAAGAGCCCGCCCATCACGACGAACCCCGCCATGATGCCCACGCTTCCGAA GAGGAGCGGCACCAAGGGGAGCGCGAGCCGGAAGAGCTTTATGATGCGCCGGAACCGGCGCCTGTCGCACCGGTCCGGGT GACCCCTTCCCACGAAGAGGTCGGCACCTATTTCACCCGCACGCATGAAGAGCCGGCTCACCAGCCGCAGGATGACTATG CGGAACCTGAAACGGCGCCTGCCCCTGCCGATGATTCCGTTCCCTCCCATTGGGCGCAGCCGGTGGATGAGGACGACTGG CGCAAGCTCGAGGAAGCGCAGAACCATGATGCGCGCCCGGCTGGCGAAGCCCATGAGGAAACTGGCAATGAGAACGGCGA ACGTCCGCTCGTTGCCGGTTATGCCGCGCAGCATTATCAGGAGCCGGAGGTAAATTTCGAGCCGGCCCCTTACGAAGAGC ATGAGCGTCGCGAGGCGGATAACCGTTTCGGTCCTGCCGCCGTGGAGCATGCGCCGGCCTTTGGCGGCCGGCACGATTTT GACGAACACCGCCAGGTGGAAGAGCAGGCGCCGAAAAAGGCAGCCGTGGTCGAGGATTTCTCGTCCTACTTCCAGGATGC GGATATTGCCATTCCGCCCAAGGACGCGCCGGCGCTGCCGCGTGCGGATGATGATCTCTTCGGGGAGAAGGCAGCGGCAA AAGACAATAAGGAACGCACGCCCTGGGACGATCTGGACGAGCTGATCGGTTATGACGGCGCTTCCTCGTCCAACCGGCAG GCTTCGGATGAAACGCCGGGTATTGGTGCCGCGGCGGCGACGCCCGCCTATATGGTCAAGAAGAAGCCGCGCCGTAACTA TGCCTCGGTCGTGCTCGCCGTTGTCGGCGTGGCGCTGCTTGCCGGTGGCGGTTATGCCGTGTGGATGAACCGCGATGCGC TAAACGATATGGTCGGCGGTCTGGTCAGTTCCGCACAGAATGGCGGCAATGGCCAGACGCCCCCGGCAGATACGGCGCAG ACGCAGCCTTCGACACCGCCGGCAACCCAGCAGCCGCCGGCCACGAACGGCCAGCAGCAGTCGACCGCGCCCAATAATCA TCAGGCCCAGTCGCATGGCGATGACGGTTCCGTCACCGGCACCAAATTTACCCAGCGGCTGATGGCCGATGGCACCGAAC GTGACGAAGGACCGGCAGCCGGTGCGAACGGTCAACCCGTTACGGCTGAAGGCCAGTCTGTCTATGAACAGAATGTCGCG CCGCCGCCTGCGGGCACGGCTCCGGCCAATAATGCCGGTGCGCCTGCGGGAACACCGGCCGGCACGCCTGCGGCACAGCA GCCTGCCGCTGCCGCCACCGGCGACCGCATGTTCCTCTATGAGGAAGTGCTGGGTCAGACGGTTCCGACTGCCATTCAGG GCAGCGTGTCCTGGTCGTTGCAGCAGGAAAATGACGCGGAAGGCAAGCCTTCGCCCACCGTGCAGGGCCAGATCACCGTT CCCGGCCGTGGCCTCAGCGCGCTCATCACCTTCAAGCGCAACACCGATCCGTCGTTGCCGGCGAGCCATCTGATCGAGAT CGTCTTCTCGGTTTCGCCCGGCTTCGAAGGCGGGGCGATCGACAGCGTCCAGCGTATCGCGATGAAGAGCACCGAGCAGG ATCGCGGCAACGCGCTGATCGCGGTTCCGGCCAAGATCACCGATGATTTCCACATGATCGCGCTCAACGACTTCCCGGAT GCGATGAAGACCAATCTGGAGCTGCTGAAGAGCCGCAACTGGATCGACATTCCGGTCTCCTATCGCAACGGCCGGCGCGC TCTGCTGACCCTGCAAAAGGGCAATGACGGCATCGCCGCCTTCGACAAGGCGCTCAGCGAATGGGCGGCGGCAGCACCGG CCGCTGGCGGTCAGTGA
Upstream 100 bases:
>100_bases GACACCATACTTGTGACTGATCCGTTTGAGGACTAATGTCCTCGGCGATCTAGATTCATAAACCATATCGGGCCGGTACG TCGCCGGTCACGACGAGAAA
Downstream 100 bases:
>100_bases TGGTTTAAGGGCGGCTCAGGCCGCCCTTTTGTTATAAGGCAACGGGCGACGTGCTTATGGAATGGCTTCGGCGGTGTCTT TGCTTTGTCGGGTGATGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: CheA Signal Transduction Histidine Kinase; Helicase
Number of amino acids: Translated: 778; Mature: 778
Protein sequence:
>778_residues MLMADFVAVIRKAVDGLANNTPENRAKVYDKARSAVVRQLENMKPRPPEELLRRQIAKLDAAIAEVDSEYAEALPALTED DAFSPVAEETAASYEHQDAVDEPAAHAAEAEHDVEPEQPAHREEAQHEPVYEEPASAEPEPVYEEPAHHDEPRHDAHASE EERHQGEREPEELYDAPEPAPVAPVRVTPSHEEVGTYFTRTHEEPAHQPQDDYAEPETAPAPADDSVPSHWAQPVDEDDW RKLEEAQNHDARPAGEAHEETGNENGERPLVAGYAAQHYQEPEVNFEPAPYEEHERREADNRFGPAAVEHAPAFGGRHDF DEHRQVEEQAPKKAAVVEDFSSYFQDADIAIPPKDAPALPRADDDLFGEKAAAKDNKERTPWDDLDELIGYDGASSSNRQ ASDETPGIGAAAATPAYMVKKKPRRNYASVVLAVVGVALLAGGGYAVWMNRDALNDMVGGLVSSAQNGGNGQTPPADTAQ TQPSTPPATQQPPATNGQQQSTAPNNHQAQSHGDDGSVTGTKFTQRLMADGTERDEGPAAGANGQPVTAEGQSVYEQNVA PPPAGTAPANNAGAPAGTPAGTPAAQQPAAAATGDRMFLYEEVLGQTVPTAIQGSVSWSLQQENDAEGKPSPTVQGQITV PGRGLSALITFKRNTDPSLPASHLIEIVFSVSPGFEGGAIDSVQRIAMKSTEQDRGNALIAVPAKITDDFHMIALNDFPD AMKTNLELLKSRNWIDIPVSYRNGRRALLTLQKGNDGIAAFDKALSEWAAAAPAAGGQ
Sequences:
>Translated_778_residues MLMADFVAVIRKAVDGLANNTPENRAKVYDKARSAVVRQLENMKPRPPEELLRRQIAKLDAAIAEVDSEYAEALPALTED DAFSPVAEETAASYEHQDAVDEPAAHAAEAEHDVEPEQPAHREEAQHEPVYEEPASAEPEPVYEEPAHHDEPRHDAHASE EERHQGEREPEELYDAPEPAPVAPVRVTPSHEEVGTYFTRTHEEPAHQPQDDYAEPETAPAPADDSVPSHWAQPVDEDDW RKLEEAQNHDARPAGEAHEETGNENGERPLVAGYAAQHYQEPEVNFEPAPYEEHERREADNRFGPAAVEHAPAFGGRHDF DEHRQVEEQAPKKAAVVEDFSSYFQDADIAIPPKDAPALPRADDDLFGEKAAAKDNKERTPWDDLDELIGYDGASSSNRQ ASDETPGIGAAAATPAYMVKKKPRRNYASVVLAVVGVALLAGGGYAVWMNRDALNDMVGGLVSSAQNGGNGQTPPADTAQ TQPSTPPATQQPPATNGQQQSTAPNNHQAQSHGDDGSVTGTKFTQRLMADGTERDEGPAAGANGQPVTAEGQSVYEQNVA PPPAGTAPANNAGAPAGTPAGTPAAQQPAAAATGDRMFLYEEVLGQTVPTAIQGSVSWSLQQENDAEGKPSPTVQGQITV PGRGLSALITFKRNTDPSLPASHLIEIVFSVSPGFEGGAIDSVQRIAMKSTEQDRGNALIAVPAKITDDFHMIALNDFPD AMKTNLELLKSRNWIDIPVSYRNGRRALLTLQKGNDGIAAFDKALSEWAAAAPAAGGQ >Mature_778_residues MLMADFVAVIRKAVDGLANNTPENRAKVYDKARSAVVRQLENMKPRPPEELLRRQIAKLDAAIAEVDSEYAEALPALTED DAFSPVAEETAASYEHQDAVDEPAAHAAEAEHDVEPEQPAHREEAQHEPVYEEPASAEPEPVYEEPAHHDEPRHDAHASE EERHQGEREPEELYDAPEPAPVAPVRVTPSHEEVGTYFTRTHEEPAHQPQDDYAEPETAPAPADDSVPSHWAQPVDEDDW RKLEEAQNHDARPAGEAHEETGNENGERPLVAGYAAQHYQEPEVNFEPAPYEEHERREADNRFGPAAVEHAPAFGGRHDF DEHRQVEEQAPKKAAVVEDFSSYFQDADIAIPPKDAPALPRADDDLFGEKAAAKDNKERTPWDDLDELIGYDGASSSNRQ ASDETPGIGAAAATPAYMVKKKPRRNYASVVLAVVGVALLAGGGYAVWMNRDALNDMVGGLVSSAQNGGNGQTPPADTAQ TQPSTPPATQQPPATNGQQQSTAPNNHQAQSHGDDGSVTGTKFTQRLMADGTERDEGPAAGANGQPVTAEGQSVYEQNVA PPPAGTAPANNAGAPAGTPAGTPAAQQPAAAATGDRMFLYEEVLGQTVPTAIQGSVSWSLQQENDAEGKPSPTVQGQITV PGRGLSALITFKRNTDPSLPASHLIEIVFSVSPGFEGGAIDSVQRIAMKSTEQDRGNALIAVPAKITDDFHMIALNDFPD AMKTNLELLKSRNWIDIPVSYRNGRRALLTLQKGNDGIAAFDKALSEWAAAAPAAGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83488; Mature: 83488
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMADFVAVIRKAVDGLANNTPENRAKVYDKARSAVVRQLENMKPRPPEELLRRQIAKLD CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AAIAEVDSEYAEALPALTEDDAFSPVAEETAASYEHQDAVDEPAAHAAEAEHDVEPEQPA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC HREEAQHEPVYEEPASAEPEPVYEEPAHHDEPRHDAHASEEERHQGEREPEELYDAPEPA HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCC PVAPVRVTPSHEEVGTYFTRTHEEPAHQPQDDYAEPETAPAPADDSVPSHWAQPVDEDDW CCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHH RKLEEAQNHDARPAGEAHEETGNENGERPLVAGYAAQHYQEPEVNFEPAPYEEHERREAD HHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHH NRFGPAAVEHAPAFGGRHDFDEHRQVEEQAPKKAAVVEDFSSYFQDADIAIPPKDAPALP CCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC RADDDLFGEKAAAKDNKERTPWDDLDELIGYDGASSSNRQASDETPGIGAAAATPAYMVK CCCHHHHCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHH KKPRRNYASVVLAVVGVALLAGGGYAVWMNRDALNDMVGGLVSSAQNGGNGQTPPADTAQ CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TQPSTPPATQQPPATNGQQQSTAPNNHQAQSHGDDGSVTGTKFTQRLMADGTERDEGPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC GANGQPVTAEGQSVYEQNVAPPPAGTAPANNAGAPAGTPAGTPAAQQPAAAATGDRMFLY CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH EEVLGQTVPTAIQGSVSWSLQQENDAEGKPSPTVQGQITVPGRGLSALITFKRNTDPSLP HHHHCCCCCHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC ASHLIEIVFSVSPGFEGGAIDSVQRIAMKSTEQDRGNALIAVPAKITDDFHMIALNDFPD HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCEECCCEEEEEECCCCH AMKTNLELLKSRNWIDIPVSYRNGRRALLTLQKGNDGIAAFDKALSEWAAAAPAAGGQ HHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLMADFVAVIRKAVDGLANNTPENRAKVYDKARSAVVRQLENMKPRPPEELLRRQIAKLD CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AAIAEVDSEYAEALPALTEDDAFSPVAEETAASYEHQDAVDEPAAHAAEAEHDVEPEQPA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC HREEAQHEPVYEEPASAEPEPVYEEPAHHDEPRHDAHASEEERHQGEREPEELYDAPEPA HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCC PVAPVRVTPSHEEVGTYFTRTHEEPAHQPQDDYAEPETAPAPADDSVPSHWAQPVDEDDW CCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHH RKLEEAQNHDARPAGEAHEETGNENGERPLVAGYAAQHYQEPEVNFEPAPYEEHERREAD HHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHH NRFGPAAVEHAPAFGGRHDFDEHRQVEEQAPKKAAVVEDFSSYFQDADIAIPPKDAPALP CCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC RADDDLFGEKAAAKDNKERTPWDDLDELIGYDGASSSNRQASDETPGIGAAAATPAYMVK CCCHHHHCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHH KKPRRNYASVVLAVVGVALLAGGGYAVWMNRDALNDMVGGLVSSAQNGGNGQTPPADTAQ CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TQPSTPPATQQPPATNGQQQSTAPNNHQAQSHGDDGSVTGTKFTQRLMADGTERDEGPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC GANGQPVTAEGQSVYEQNVAPPPAGTAPANNAGAPAGTPAGTPAAQQPAAAATGDRMFLY CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH EEVLGQTVPTAIQGSVSWSLQQENDAEGKPSPTVQGQITVPGRGLSALITFKRNTDPSLP HHHHCCCCCHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC ASHLIEIVFSVSPGFEGGAIDSVQRIAMKSTEQDRGNALIAVPAKITDDFHMIALNDFPD HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCEECCCEEEEEECCCCH AMKTNLELLKSRNWIDIPVSYRNGRRALLTLQKGNDGIAAFDKALSEWAAAAPAAGGQ HHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA