Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889713
Identifier: 15889713
GI number: 15889713
Start: 2412442
End: 2412834
Strand: Reverse
Name: 15889713
Synonym: Atu2442
Alternate gene names: NA
Gene position: 2412834-2412442 (Counterclockwise)
Preceding gene: 15889717
Following gene: 159185217
Centisome position: 84.91
GC content: 60.31
Gene sequence:
>393_bases ATGACGCAGATCGAGCCAGACGAACAGGAAGACAAGCCGCTTGATCCGGCCATGGAAAAAGTTCGCCGCAAGATGATCCG TTTGCAGATCGTGTCGGGCTCCGTGATGTTTATCAGCCTTATGGCCGTCTTCGGCGCGGTTGTCTACAAGGCGATGGGGC CGGCGAAAACGGTTCAGGCGCAGAGCGAAGCGCCGAACCTTTCGGTTCCGACCGGCAACGGACCCGTTGCCGTCACCGCC AGCCTGCCGCAGGGCTTTGTGATCGACAATGTGAGCTATTCCGGCGGCGACATGCTGTTTTACGGCCGGCTGGCCAATGG CACTCGCAAGGCGCTGGTCTTCAACGTCGCAGCCGGCCGGTTCCTTGCCGATGTGACTGTTGATGGCCAGTGA
Upstream 100 bases:
>100_bases GCGTCTTCCCCGGCAATCAGGACTTTCCTTGCGTCTCCGCCTTGTTTAAAGGGGTCGTTCATTCTTATTTTTCCGATCCA TCAGCATTTCAGGGAACCCG
Downstream 100 bases:
>100_bases GGCCAATAAGCTGCTGGACGGGCGGGCGCTGATCCCGATCGACGACCCGGCCGATCCGCGCATCGCCGCCTTTCGCGATA TTCGTGAGCGTGATCTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTQIEPDEQEDKPLDPAMEKVRRKMIRLQIVSGSVMFISLMAVFGAVVYKAMGPAKTVQAQSEAPNLSVPTGNGPVAVTA SLPQGFVIDNVSYSGGDMLFYGRLANGTRKALVFNVAAGRFLADVTVDGQ
Sequences:
>Translated_130_residues MTQIEPDEQEDKPLDPAMEKVRRKMIRLQIVSGSVMFISLMAVFGAVVYKAMGPAKTVQAQSEAPNLSVPTGNGPVAVTA SLPQGFVIDNVSYSGGDMLFYGRLANGTRKALVFNVAAGRFLADVTVDGQ >Mature_129_residues TQIEPDEQEDKPLDPAMEKVRRKMIRLQIVSGSVMFISLMAVFGAVVYKAMGPAKTVQAQSEAPNLSVPTGNGPVAVTAS LPQGFVIDNVSYSGGDMLFYGRLANGTRKALVFNVAAGRFLADVTVDGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13864; Mature: 13733
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIEPDEQEDKPLDPAMEKVRRKMIRLQIVSGSVMFISLMAVFGAVVYKAMGPAKTVQA CCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHEEC QSEAPNLSVPTGNGPVAVTASLPQGFVIDNVSYSGGDMLFYGRLANGTRKALVFNVAAGR CCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCC FLADVTVDGQ EEEEEEECCC >Mature Secondary Structure TQIEPDEQEDKPLDPAMEKVRRKMIRLQIVSGSVMFISLMAVFGAVVYKAMGPAKTVQA CCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHEEC QSEAPNLSVPTGNGPVAVTASLPQGFVIDNVSYSGGDMLFYGRLANGTRKALVFNVAAGR CCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCC FLADVTVDGQ EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA