Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is braE [H]
Identifier: 15889696
GI number: 15889696
Start: 2397884
End: 2399281
Strand: Reverse
Name: braE [H]
Synonym: Atu2426
Alternate gene names: 15889696
Gene position: 2399281-2397884 (Counterclockwise)
Preceding gene: 15889697
Following gene: 159185210
Centisome position: 84.43
GC content: 58.37
Gene sequence:
>1398_bases ATGACCAATATCGCTTCCGAAAATGCCGCTTCCAGCCCGAGCCTGATGGCGACGGCCATGAAGGAGGGCCTGATTGCCGG CGTCATCTCGTTCGGCATGTTCATTCTCTATATCGGCATCATCACCTATCAGGATATCAATAACCAGCTGATCTGGGGCA CACGCTGGGGGCTGCTGGCGATCTTCGTCGCCGTTGCCGCCGTTGGCCGCTTTCTTGTGGTCGGTTTCATCAAGCCGTCG CTGGATCGCCGCAAGCTCTCCAAGGCCAAGAGCGGCGTGCTGGAAATCTCCGAAGAAAAAGGCTTTTTTCACAAGCACTT CCTGAAATTCGCGCTGGTTCTGCTGCTGCTTTATCCCGTGATTGCCGTGCAGCTTTTCGGTTTTCAGGGTTCGCTGAAAT TCGTCGACAATTTCGGCATCCAGATCCTGATCTACGTGATGCTGGCCTGGGGCCTCAATATCGTCGTCGGTCTCGCTGGC CTGCTCGATCTCGGTTATGTGGCCTTTTATGCGGTGGGCGCTTATTCCTACGCGCTGCTTTCCAGCCAGTTCGGCCTGTC CTTCTGGGTGCTTCTGCCGGTTGCCGGTATTCTTGCCGGCTTCTGGGGCGTCATCCTCGGTTTCCCGGTGCTTCGTCTTC GCGGCGACTATCTGGCGATCGTCACGCTTGCCTTCGGTGAAATCATCCGTCTCGTGCTGTTGAACTGGACGGCCGTCACC AAGGGCACCTTTGGTATTTCCGGCATCGCCAAGGCGTCCGTCTTCGGCATCTGGTCCTTCGATGTCGGCGCGCCCAACAA CTTCGCCAAGGTCTTTGGCCTGTCGATGTCGTCGGCCTATTACAAGATTTTCCTGTTCTACGTGATCCTGCTTCTGTGCA TGCTGACGGCTTACGTCACCATCAAGTTGCGCCGCATGCCGATCGGCCGCGCATGGGAAGCGTTGCGTGAAGATGAAATC GCCTGCCGTTCGCTCGGCATCGATACCGTCATCACCAAGCTCACCGCCTTTGCCACGGGCGCGATGTTCGGCGGTTTCGC CGGTTCGTTCTTCGCTGCGCGTCAGGGTTTCGTGTCGCCGGAAAGCTTCGTGTTCCTCGAATCCGCCGTCATTCTCGCCA TCGTCGTTCTCGGCGGCATGGGCTCGCTGACGGGTATCGCCATTGCGGCGCTCGTCATGGTCGGCGGCACCGAGCTTCTG CGCGAAATGGAGTTCCTGAAGCATGTCTTCGGGCCTGATTTCACGCCGGAACTTTACCGCATGCTGCTCTTCGGTCTCGC CATGGTCATCGTCATGCTGTTCAAGCCGCGCGGCTTCGTCGGCTCGCGTGAACCCACGGCCTTCCTCAGGGAACGCAAGG CCGTGTCCGGCAGCTTTACCAAGGAAGGTCACGGTTGA
Upstream 100 bases:
>100_bases GCCTACAAGGATGTTGCGGCATTCGGCATCCTGGCATTCGTGCTGATCTTCAAGCCGACCGGTATTCTCGGTCGTCCGGA AGTCGAGAAGGTGTGATCCC
Downstream 100 bases:
>100_bases TGGCTTCCGGAACGATGAACATGACATCCAATACGACCGGCAATACAACTGGCGACACGATCCTCAAGGTCGAACATCTC TCGATGAAGTTCGGCGGCCT
Product: ABC transporter, membrane spanning protein (branched chain amino acid)
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MTNIASENAASSPSLMATAMKEGLIAGVISFGMFILYIGIITYQDINNQLIWGTRWGLLAIFVAVAAVGRFLVVGFIKPS LDRRKLSKAKSGVLEISEEKGFFHKHFLKFALVLLLLYPVIAVQLFGFQGSLKFVDNFGIQILIYVMLAWGLNIVVGLAG LLDLGYVAFYAVGAYSYALLSSQFGLSFWVLLPVAGILAGFWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLLNWTAVT KGTFGISGIAKASVFGIWSFDVGAPNNFAKVFGLSMSSAYYKIFLFYVILLLCMLTAYVTIKLRRMPIGRAWEALREDEI ACRSLGIDTVITKLTAFATGAMFGGFAGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAALVMVGGTELL REMEFLKHVFGPDFTPELYRMLLFGLAMVIVMLFKPRGFVGSREPTAFLRERKAVSGSFTKEGHG
Sequences:
>Translated_465_residues MTNIASENAASSPSLMATAMKEGLIAGVISFGMFILYIGIITYQDINNQLIWGTRWGLLAIFVAVAAVGRFLVVGFIKPS LDRRKLSKAKSGVLEISEEKGFFHKHFLKFALVLLLLYPVIAVQLFGFQGSLKFVDNFGIQILIYVMLAWGLNIVVGLAG LLDLGYVAFYAVGAYSYALLSSQFGLSFWVLLPVAGILAGFWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLLNWTAVT KGTFGISGIAKASVFGIWSFDVGAPNNFAKVFGLSMSSAYYKIFLFYVILLLCMLTAYVTIKLRRMPIGRAWEALREDEI ACRSLGIDTVITKLTAFATGAMFGGFAGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAALVMVGGTELL REMEFLKHVFGPDFTPELYRMLLFGLAMVIVMLFKPRGFVGSREPTAFLRERKAVSGSFTKEGHG >Mature_464_residues TNIASENAASSPSLMATAMKEGLIAGVISFGMFILYIGIITYQDINNQLIWGTRWGLLAIFVAVAAVGRFLVVGFIKPSL DRRKLSKAKSGVLEISEEKGFFHKHFLKFALVLLLLYPVIAVQLFGFQGSLKFVDNFGIQILIYVMLAWGLNIVVGLAGL LDLGYVAFYAVGAYSYALLSSQFGLSFWVLLPVAGILAGFWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLLNWTAVTK GTFGISGIAKASVFGIWSFDVGAPNNFAKVFGLSMSSAYYKIFLFYVILLLCMLTAYVTIKLRRMPIGRAWEALREDEIA CRSLGIDTVITKLTAFATGAMFGGFAGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAALVMVGGTELLR EMEFLKHVFGPDFTPELYRMLLFGLAMVIVMLFKPRGFVGSREPTAFLRERKAVSGSFTKEGHG
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=315, Percent_Identity=52.6984126984127, Blast_Score=281, Evalue=8e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 50626; Mature: 50495
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIASENAASSPSLMATAMKEGLIAGVISFGMFILYIGIITYQDINNQLIWGTRWGLLA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHH IFVAVAAVGRFLVVGFIKPSLDRRKLSKAKSGVLEISEEKGFFHKHFLKFALVLLLLYPV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHHHHHH IAVQLFGFQGSLKFVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSYALL HHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSQFGLSFWVLLPVAGILAGFWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLLNWTAVT HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC KGTFGISGIAKASVFGIWSFDVGAPNNFAKVFGLSMSSAYYKIFLFYVILLLCMLTAYVT CCCCCCCHHHHHHEEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH IKLRRMPIGRAWEALREDEIACRSLGIDTVITKLTAFATGAMFGGFAGSFFAARQGFVSP HHHEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ESFVFLESAVILAIVVLGGMGSLTGIAIAALVMVGGTELLREMEFLKHVFGPDFTPELYR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHH MLLFGLAMVIVMLFKPRGFVGSREPTAFLRERKAVSGSFTKEGHG HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TNIASENAASSPSLMATAMKEGLIAGVISFGMFILYIGIITYQDINNQLIWGTRWGLLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHH IFVAVAAVGRFLVVGFIKPSLDRRKLSKAKSGVLEISEEKGFFHKHFLKFALVLLLLYPV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHHHHHH IAVQLFGFQGSLKFVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSYALL HHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSQFGLSFWVLLPVAGILAGFWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLLNWTAVT HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC KGTFGISGIAKASVFGIWSFDVGAPNNFAKVFGLSMSSAYYKIFLFYVILLLCMLTAYVT CCCCCCCHHHHHHEEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH IKLRRMPIGRAWEALREDEIACRSLGIDTVITKLTAFATGAMFGGFAGSFFAARQGFVSP HHHEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ESFVFLESAVILAIVVLGGMGSLTGIAIAALVMVGGTELLREMEFLKHVFGPDFTPELYR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHH MLLFGLAMVIVMLFKPRGFVGSREPTAFLRERKAVSGSFTKEGHG HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]