| Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
|---|---|
| Accession | NC_003062 |
| Length | 2,841,580 |
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The map label for this gene is livG [H]
Identifier: 159185210
GI number: 159185210
Start: 2396994
End: 2397884
Strand: Reverse
Name: livG [H]
Synonym: Atu2425
Alternate gene names: 159185210
Gene position: 2397884-2396994 (Counterclockwise)
Preceding gene: 15889696
Following gene: 15889694
Centisome position: 84.39
GC content: 57.91
Gene sequence:
>891_bases ATGGCTTCCGGAACGATGAACATGACATCCAATACGACCGGCAATACAACTGGCGACACGATCCTCAAGGTCGAACATCT CTCGATGAAGTTCGGCGGCCTGATGGCCATCAACGACTTCTCCTTCGAGGCGAAGCGCGGCGAGATCACCGCGCTGATCG GCCCGAACGGCGCTGGAAAGACCACGGTTTTCAACTGCATCACCGGCTTCTACAAGCCGACGATGGGCATGATCACCATG CGTCAGCAAAACGGCGAGGCGCATCTTCTCGAGCGCCTGCCGGATTTCGAGATTACCAAAAAGGCCAAGGTGGCGCGCAC CTTCCAGAACATCCGCCTGTTTTCGGGCCTGACTGTTCTGGAAAACCTGCTGGTCGCGCAGCACAATGCGCTGATGAAGG CTTCGGGTTACACCATTCTCGGTCTTCTCGGTCTACCCGCCTACAAAAGAGCGGTCGCGAGCTCGATCGAGAAAGCCAAA TACTGGTTGGAAAAGGCCGATCTGGTAGACCGCGCCGATGACCCTGCCGGTGATCTGCCCTATGGCGCGCAGCGCCGTCT GGAAATCGCCCGCGCCATGTGCACAGGGCCTGAACTTCTGTGTCTCGATGAGCCGGCCGCCGGCCTCAACCCGAAGGAAT CGCTGGCGCTCAACACGCTGTTGCGCAGCATACGCGACGAAGGCACGTCGTTGCTCCTGATCGAGCATGACATGTCCGTT GTGATGCAGATTTCCGACCATGTCGTGGTTCTGGAATACGGCCAGAAAATTTCCGATGGTTCGCCGGACCATGTGAAGAA CGACCCGAAGGTCATCGCCGCCTATCTTGGTGTCGAGGATGATGAAGTGGAAGACGTGATTGCGGAAGAACTCGACGGAG GAGCGGCCTGA
Upstream 100 bases:
>100_bases TGTTCAAGCCGCGCGGCTTCGTCGGCTCGCGTGAACCCACGGCCTTCCTCAGGGAACGCAAGGCCGTGTCCGGCAGCTTT ACCAAGGAAGGTCACGGTTG
Downstream 100 bases:
>100_bases TGTCCGGTGAACCGCTTCTGAAAGTCCAGGGTGTCGAAACCTATTATGGCAATATCCGCGCTCTGGCCGGTGTCGATGTC GAAGTCAAAAAGGGTGAAAT
Product: ABC transporter, nucleotide binding/ATPase protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MASGTMNMTSNTTGNTTGDTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMITM RQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTILGLLGLPAYKRAVASSIEKAK YWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPELLCLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSV VMQISDHVVVLEYGQKISDGSPDHVKNDPKVIAAYLGVEDDEVEDVIAEELDGGAA
Sequences:
>Translated_296_residues MASGTMNMTSNTTGNTTGDTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMITM RQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTILGLLGLPAYKRAVASSIEKAK YWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPELLCLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSV VMQISDHVVVLEYGQKISDGSPDHVKNDPKVIAAYLGVEDDEVEDVIAEELDGGAA >Mature_295_residues ASGTMNMTSNTTGNTTGDTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMITMR QQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTILGLLGLPAYKRAVASSIEKAKY WLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPELLCLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSVV MQISDHVVVLEYGQKISDGSPDHVKNDPKVIAAYLGVEDDEVEDVIAEELDGGAA
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI45446740, Length=252, Percent_Identity=29.7619047619048, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI47078218, Length=252, Percent_Identity=29.7619047619048, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI31657092, Length=235, Percent_Identity=27.6595744680851, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI27881501, Length=236, Percent_Identity=26.271186440678, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI30795238, Length=236, Percent_Identity=26.271186440678, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI153792144, Length=234, Percent_Identity=27.3504273504274, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI150417984, Length=257, Percent_Identity=28.7937743190661, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI105990541, Length=259, Percent_Identity=27.4131274131274, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI21536376, Length=236, Percent_Identity=26.271186440678, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI27477115, Length=210, Percent_Identity=29.5238095238095, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI116734710, Length=255, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27436953, Length=238, Percent_Identity=28.1512605042017, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI9665248, Length=226, Percent_Identity=28.3185840707965, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI46592971, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI46592898, Length=217, Percent_Identity=27.6497695852535, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI46592978, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI46592915, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI46592964, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI46592956, Length=217, Percent_Identity=27.6497695852535, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI21536378, Length=233, Percent_Identity=25.3218884120172, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1789864, Length=258, Percent_Identity=51.5503875968992, Blast_Score=260, Evalue=6e-71, Organism=Escherichia coli, GI1788761, Length=260, Percent_Identity=28.0769230769231, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788225, Length=257, Percent_Identity=27.2373540856031, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI87081782, Length=263, Percent_Identity=28.1368821292776, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1789672, Length=257, Percent_Identity=23.3463035019455, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI48995001, Length=238, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786872, Length=252, Percent_Identity=27.3809523809524, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1790525, Length=241, Percent_Identity=27.8008298755187, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789593, Length=256, Percent_Identity=26.5625, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082268, Length=262, Percent_Identity=27.8625954198473, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787029, Length=251, Percent_Identity=25.4980079681275, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786398, Length=281, Percent_Identity=29.5373665480427, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788644, Length=262, Percent_Identity=29.0076335877863, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1789991, Length=242, Percent_Identity=29.3388429752066, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1788210, Length=230, Percent_Identity=28.2608695652174, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788472, Length=260, Percent_Identity=25.7692307692308, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1788165, Length=257, Percent_Identity=27.6264591439689, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI87081709, Length=268, Percent_Identity=25.3731343283582, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1790544, Length=257, Percent_Identity=26.0700389105058, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789032, Length=251, Percent_Identity=25.8964143426295, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI48994997, Length=252, Percent_Identity=27.3809523809524, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790190, Length=244, Percent_Identity=25.4098360655738, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787370, Length=250, Percent_Identity=27.2, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787089, Length=232, Percent_Identity=25, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786563, Length=268, Percent_Identity=27.6119402985075, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789873, Length=237, Percent_Identity=28.2700421940928, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1786319, Length=241, Percent_Identity=26.1410788381743, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787712, Length=275, Percent_Identity=25.8181818181818, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1790162, Length=258, Percent_Identity=24.031007751938, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI87081791, Length=260, Percent_Identity=23.4615384615385, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788897, Length=241, Percent_Identity=26.1410788381743, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI48994943, Length=246, Percent_Identity=27.6422764227642, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI87082267, Length=260, Percent_Identity=25.3846153846154, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787759, Length=266, Percent_Identity=27.8195488721804, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786253, Length=261, Percent_Identity=27.2030651340996, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1790467, Length=259, Percent_Identity=23.1660231660232, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786703, Length=244, Percent_Identity=27.8688524590164, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1786803, Length=245, Percent_Identity=23.265306122449, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1787105, Length=238, Percent_Identity=26.0504201680672, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI2367384, Length=236, Percent_Identity=26.6949152542373, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789586, Length=266, Percent_Identity=27.4436090225564, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87081834, Length=214, Percent_Identity=26.1682242990654, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1789963, Length=266, Percent_Identity=25.187969924812, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1786345, Length=251, Percent_Identity=25.4980079681275, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787164, Length=237, Percent_Identity=25.3164556962025, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787792, Length=256, Percent_Identity=25, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787143, Length=234, Percent_Identity=27.3504273504274, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786981, Length=223, Percent_Identity=31.390134529148, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17510237, Length=235, Percent_Identity=27.2340425531915, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17565586, Length=240, Percent_Identity=28.75, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71983523, Length=251, Percent_Identity=27.0916334661355, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71983516, Length=251, Percent_Identity=27.0916334661355, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71983510, Length=251, Percent_Identity=27.0916334661355, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17567269, Length=218, Percent_Identity=28.8990825688073, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI115533608, Length=220, Percent_Identity=28.6363636363636, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24666092, Length=248, Percent_Identity=29.4354838709677, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24648314, Length=255, Percent_Identity=25.8823529411765, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI221512771, Length=245, Percent_Identity=27.3469387755102, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24643674, Length=248, Percent_Identity=27.0161290322581, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI28573571, Length=249, Percent_Identity=27.3092369477912, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573573, Length=231, Percent_Identity=28.1385281385281, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI221500365, Length=242, Percent_Identity=25.6198347107438, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI116007184, Length=242, Percent_Identity=25.6198347107438, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574744, Length=217, Percent_Identity=29.9539170506912, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI19920532, Length=217, Percent_Identity=25.8064516129032, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24580930, Length=217, Percent_Identity=25.8064516129032, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 32073; Mature: 31942
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGTMNMTSNTTGNTTGDTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGK CCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCCC TTVFNCITGFYKPTMGMITMRQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVL HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ENLLVAQHNALMKASGYTILGLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLP HHHHHHHHHHHEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC YGAQRRLEIARAMCTGPELLCLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSV CCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEE VMQISDHVVVLEYGQKISDGSPDHVKNDPKVIAAYLGVEDDEVEDVIAEELDGGAA EEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure ASGTMNMTSNTTGNTTGDTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGK CCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCCC TTVFNCITGFYKPTMGMITMRQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVL HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ENLLVAQHNALMKASGYTILGLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLP HHHHHHHHHHHEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC YGAQRRLEIARAMCTGPELLCLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSV CCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEE VMQISDHVVVLEYGQKISDGSPDHVKNDPKVIAAYLGVEDDEVEDVIAEELDGGAA EEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]