Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889666
Identifier: 15889666
GI number: 15889666
Start: 2368470
End: 2369294
Strand: Reverse
Name: 15889666
Synonym: Atu2395
Alternate gene names: NA
Gene position: 2369294-2368470 (Counterclockwise)
Preceding gene: 159185193
Following gene: 15889655
Centisome position: 83.38
GC content: 62.79
Gene sequence:
>825_bases ATGAATGCACCGCTGCGTTTTGGCCCCTATGCCGTGTCCCGGTTCGTTGATGGCGTCTACAAGGCACCTGTCGGTCATCT CATCCACCGGCAGGGCGCGGTGGCGCTGGCTGCGGTTGTGGCCGGGCTCGAGGGCGAGACGGTGGATATGGATGTCAATT GTTTCGCGCTGTCGGGGCCCGATGGTGTGTGGCTGATCGATGCCGGTTGCGGCACGGCCTGGGGCGCTGCCTATGGCCAT GCCCGCGCGGCGATGCTTGCCGCTGGAATTCAGCCTGATGATGTCAGTCGTGTCATCCTCACCCATATTCACGGTGACCA CGCGCTGGGCCTCATCGATGGCGACCGGCCCTATTTTCCCAATGCGGAGATATGGGTGCCCGAGGCCGATCTTGCCTTCT TCACCAATGCCGATGCCCGCAAGACATTGCCGCCCGCCCGGCAGGGCGGTTTCGATCTTGCCGCGCGGCTGCTCGATATT TGCGGCGCCATGCTGCGGCCGATCCCCACGGGAACGGTTGCCGAGGATATCGAGGCGATCGCCATGCCCGGTCACACGCC CGGACATATGGGTTATCTCATCGGCAGTGGCGATGCGCGGCTGTTATTGTGGGGTGATGTGCTGCATGTCGGTGAATTGC AGGCGGCCGATCCTGAAATCGCTTTCGTTTACGATATCGATTCCGAGCTTGCCTACGCCACCCGTCTTGCGGCGCTGGCT GAAGCCGCCGATCATGGCTGGCTGGTTTCCGGCGGTCATCTCGGTGGTTTTTTCCACATCGAACGGCGGGGAGACAGCTT CCGCTTCGTGCCGCAGCCGGGCTGA
Upstream 100 bases:
>100_bases GATGCGCAACGCCATGCCGTTCGTTTTTACCGATATGAAACGGGGCGATGGCGTCGATCGTATCGTCGGTTTCCTGAAAG AGCAGGGTGGTCTGTGAGCC
Downstream 100 bases:
>100_bases TTTTCCGCTTTCAGTCATGCAGAAGGGCGGCATGCCGGTTGGCATACCGCCCTTCATCCTCTCCCGGTGTTTTCAGATCT GCTTTAATGCCGCGACGTCA
Product: metal dependent hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Twin-Arginine Translocation Pathway Signal; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase; Methyl Parathion Hydrolase; Metal Dependent Hydrolase; Beta-Lactamase Superfamily Hydrolase; Metallo-Hydrolase Protein; Hydrolase; Glyoxalase II; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Beta-Lactamase Domain Hydrolase; Metal-Dependent Hydrolase; Organophosphate Pesticide Hydrolase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; GloB Protein; Beta-Lactamase; Aldehyde Dehydrogenase; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MNAPLRFGPYAVSRFVDGVYKAPVGHLIHRQGAVALAAVVAGLEGETVDMDVNCFALSGPDGVWLIDAGCGTAWGAAYGH ARAAMLAAGIQPDDVSRVILTHIHGDHALGLIDGDRPYFPNAEIWVPEADLAFFTNADARKTLPPARQGGFDLAARLLDI CGAMLRPIPTGTVAEDIEAIAMPGHTPGHMGYLIGSGDARLLLWGDVLHVGELQAADPEIAFVYDIDSELAYATRLAALA EAADHGWLVSGGHLGGFFHIERRGDSFRFVPQPG
Sequences:
>Translated_274_residues MNAPLRFGPYAVSRFVDGVYKAPVGHLIHRQGAVALAAVVAGLEGETVDMDVNCFALSGPDGVWLIDAGCGTAWGAAYGH ARAAMLAAGIQPDDVSRVILTHIHGDHALGLIDGDRPYFPNAEIWVPEADLAFFTNADARKTLPPARQGGFDLAARLLDI CGAMLRPIPTGTVAEDIEAIAMPGHTPGHMGYLIGSGDARLLLWGDVLHVGELQAADPEIAFVYDIDSELAYATRLAALA EAADHGWLVSGGHLGGFFHIERRGDSFRFVPQPG >Mature_274_residues MNAPLRFGPYAVSRFVDGVYKAPVGHLIHRQGAVALAAVVAGLEGETVDMDVNCFALSGPDGVWLIDAGCGTAWGAAYGH ARAAMLAAGIQPDDVSRVILTHIHGDHALGLIDGDRPYFPNAEIWVPEADLAFFTNADARKTLPPARQGGFDLAARLLDI CGAMLRPIPTGTVAEDIEAIAMPGHTPGHMGYLIGSGDARLLLWGDVLHVGELQAADPEIAFVYDIDSELAYATRLAALA EAADHGWLVSGGHLGGFFHIERRGDSFRFVPQPG
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28980; Mature: 28980
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPLRFGPYAVSRFVDGVYKAPVGHLIHRQGAVALAAVVAGLEGETVDMDVNCFALSGP CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEEEEEECC DGVWLIDAGCGTAWGAAYGHARAAMLAAGIQPDDVSRVILTHIHGDHALGLIDGDRPYFP CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHCEEEEEEECCCEEEEEEECCCCCCC NAEIWVPEADLAFFTNADARKTLPPARQGGFDLAARLLDICGAMLRPIPTGTVAEDIEAI CCEEEECCCCEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHEE AMPGHTPGHMGYLIGSGDARLLLWGDVLHVGELQAADPEIAFVYDIDSELAYATRLAALA ECCCCCCCCEEEEEECCCEEEEEEECEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHH EAADHGWLVSGGHLGGFFHIERRGDSFRFVPQPG HHCCCCEEEECCCCCEEEEEEECCCCEEEECCCC >Mature Secondary Structure MNAPLRFGPYAVSRFVDGVYKAPVGHLIHRQGAVALAAVVAGLEGETVDMDVNCFALSGP CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEEEEEECC DGVWLIDAGCGTAWGAAYGHARAAMLAAGIQPDDVSRVILTHIHGDHALGLIDGDRPYFP CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHCEEEEEEECCCEEEEEEECCCCCCC NAEIWVPEADLAFFTNADARKTLPPARQGGFDLAARLLDICGAMLRPIPTGTVAEDIEAI CCEEEECCCCEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHEE AMPGHTPGHMGYLIGSGDARLLLWGDVLHVGELQAADPEIAFVYDIDSELAYATRLAALA ECCCCCCCCEEEEEECCCEEEEEEECEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHH EAADHGWLVSGGHLGGFFHIERRGDSFRFVPQPG HHCCCCEEEECCCCCEEEEEEECCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA