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The map label for this gene is 15889542

Identifier: 15889542

GI number: 15889542

Start: 2241331

End: 2241975

Strand: Reverse

Name: 15889542

Synonym: Atu2267

Alternate gene names: NA

Gene position: 2241975-2241331 (Counterclockwise)

Preceding gene: 159185131

Following gene: 159185130

Centisome position: 78.9

GC content: 61.4

Gene sequence:

>645_bases
ATGAGGAAGACGGAAGACATCATCGAAAAACTGGCGGGTGATCTGAAACCCGTCCCCGCTTCTGCGCTGGAGCGCAGGCT
GGCGCGCGCAGCCTTGCCGGCACTCGGCCTCTCGCTCCTGTTGATGTTCCTGATTCTGGGGCTACGCAGGGATATGAGCG
ATGCGATGACCGAACCCGGTTTCTGGGTCAAATCCGCCTATAATGCCCTGCTCGCCCTGACGGCATTTCTGGCCGTCATG
CGTCTTGCGCGGCCGGATGGCGACAGAGGCGGCCTGTTCGCCTGGCTTGCCGTGATTTTTGTCGCCATGGCGGTGATCGC
GCTGGTCCAGCTTGGATTTGCCCTGCCGGGCACCTATCGCACTCTCATTCTCGGATCATCGGCGCTGCACTGCCCGTTCC
TTATCGTTGCTTTCGCACTGCCCCTGTTTCTGGCAAATTTTGCGGTTCTCAGGCATTCGGCTCCCGCCGATCCCACGCTT
GCGGGTTTTGCCGCCGGCCTTGCGGCCGGTGCGGCGGGGGCCTGGGTCTATTCGTGGTTCTGCACCGAAAACGGCATGGC
TTTTGTGCTGATCTGGTACTCGCTCGGTATTCTCCTGACCGGCGTGATAGGCGCTTTTGCCGGTTCACGCCTGCTGCGCT
GGTGA

Upstream 100 bases:

>100_bases
TCGCCGAAGCGGCAGAGAAATCCGGCCAGACCGAGCTTGCGGCGAGGGTCGGCATTCACAGAACGCTGAAAGTCCTGGCG
GCAAAGTTGCGGGGGGACAT

Downstream 100 bases:

>100_bases
GCCTGCATCTCACCGCGGTTTGTGATGCCGGCCCGGTGAAAGTTCCGCGCCGGCAGTCTGCCTTGAGCGACTTTACTGAC
CCAGATTAGCGGGAATGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: ECF-Family RNA Polymerase Sigma Factor; Extracytoplasmic Function AlteRNAtive Sigma Factor

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MRKTEDIIEKLAGDLKPVPASALERRLARAALPALGLSLLLMFLILGLRRDMSDAMTEPGFWVKSAYNALLALTAFLAVM
RLARPDGDRGGLFAWLAVIFVAMAVIALVQLGFALPGTYRTLILGSSALHCPFLIVAFALPLFLANFAVLRHSAPADPTL
AGFAAGLAAGAAGAWVYSWFCTENGMAFVLIWYSLGILLTGVIGAFAGSRLLRW

Sequences:

>Translated_214_residues
MRKTEDIIEKLAGDLKPVPASALERRLARAALPALGLSLLLMFLILGLRRDMSDAMTEPGFWVKSAYNALLALTAFLAVM
RLARPDGDRGGLFAWLAVIFVAMAVIALVQLGFALPGTYRTLILGSSALHCPFLIVAFALPLFLANFAVLRHSAPADPTL
AGFAAGLAAGAAGAWVYSWFCTENGMAFVLIWYSLGILLTGVIGAFAGSRLLRW
>Mature_214_residues
MRKTEDIIEKLAGDLKPVPASALERRLARAALPALGLSLLLMFLILGLRRDMSDAMTEPGFWVKSAYNALLALTAFLAVM
RLARPDGDRGGLFAWLAVIFVAMAVIALVQLGFALPGTYRTLILGSSALHCPFLIVAFALPLFLANFAVLRHSAPADPTL
AGFAAGLAAGAAGAWVYSWFCTENGMAFVLIWYSLGILLTGVIGAFAGSRLLRW

Specific function: Unknown

COG id: COG4944

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22883; Mature: 22883

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTEDIIEKLAGDLKPVPASALERRLARAALPALGLSLLLMFLILGLRRDMSDAMTEPG
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FWVKSAYNALLALTAFLAVMRLARPDGDRGGLFAWLAVIFVAMAVIALVQLGFALPGTYR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TLILGSSALHCPFLIVAFALPLFLANFAVLRHSAPADPTLAGFAAGLAAGAAGAWVYSWF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CTENGMAFVLIWYSLGILLTGVIGAFAGSRLLRW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKTEDIIEKLAGDLKPVPASALERRLARAALPALGLSLLLMFLILGLRRDMSDAMTEPG
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FWVKSAYNALLALTAFLAVMRLARPDGDRGGLFAWLAVIFVAMAVIALVQLGFALPGTYR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TLILGSSALHCPFLIVAFALPLFLANFAVLRHSAPADPTLAGFAAGLAAGAAGAWVYSWF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CTENGMAFVLIWYSLGILLTGVIGAFAGSRLLRW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA