Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15889511
Identifier: 15889511
GI number: 15889511
Start: 2206510
End: 2206977
Strand: Direct
Name: 15889511
Synonym: Atu2235
Alternate gene names: NA
Gene position: 2206510-2206977 (Clockwise)
Preceding gene: 159185113
Following gene: 159185117
Centisome position: 77.65
GC content: 58.76
Gene sequence:
>468_bases ATGAGACTGGCAGAACTTTCCCCGATCGGCGAACGCGTCACCCTCGATACGCTGCATTTTTCCGCCGAAGACATTATTCG CTTCGCTCGCGATTTCGACCCGCAGCCCTTTCATCTCGATGCCGAGGCGGCCAGGAACAGTGTTTTCGGCGGGCTCTGTG CCTCCGGCTGGCACACCGGCGCGGGCTGGATGAAATCCTTCCTGTCCCATTGGGCAAAGGAAGTGAAGCGGTTGAAGCTA CAGGGGCTGGAACCGCCGAAACTCGGCCCCTCCCCGGGCTTCCGCGAACTTAAATGGAAAAAGCCGGTTTTTGCCGGTGA CGACGTGACCTATTTCGTCACCCTGCTCGACGCTCGCCCGCTGGAATCGAGGCCCGGCATCTGGCTGAACATCACCTTCA ACGAGGGCGTCAATCAGTCGGGAGAAACGGTACTGACCTTCCAGAGCGGGGTTCTGGAATTCGATTAA
Upstream 100 bases:
>100_bases TAAAATTGCGCCACGAGCTTTATAACCAGCGCGGCATTCTGGTCTCACAGGGAGAAAACACCGTCATGTTCCTGATGGGT GGCGATGGAGGCGTTGCGGC
Downstream 100 bases:
>100_bases TACGAGCCCTGGGGCAAACCATCGCGACTTGCCCCGGTTACCGCCTCAATGGCCAGAAAATTCTACCAGCGTGCGCACGT CGACGCCAAGATCTTCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: MaoC-Like Dehydratase; MaoC Domain Protein Dehydratase; Acyl Dehydratase; MaoC Domain-Containing Protein Dehydratase; Enoyl-CoA Hydratase Protein; MaoC Domain-Containing Protein; MaoC Family Protein; MaoC Domain Protein; MaoC Like Domain; MaoC Protein; MaoC-Like Protein; MoaC Domain-Containing Protein; Maoc Domain Protein; MaoC Dehydratase; -Specific Enoyl-CoA Hydratase MaoC- Like; Dehydratase Maoc-Like Domain; MaoC-Related Protein
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MRLAELSPIGERVTLDTLHFSAEDIIRFARDFDPQPFHLDAEAARNSVFGGLCASGWHTGAGWMKSFLSHWAKEVKRLKL QGLEPPKLGPSPGFRELKWKKPVFAGDDVTYFVTLLDARPLESRPGIWLNITFNEGVNQSGETVLTFQSGVLEFD
Sequences:
>Translated_155_residues MRLAELSPIGERVTLDTLHFSAEDIIRFARDFDPQPFHLDAEAARNSVFGGLCASGWHTGAGWMKSFLSHWAKEVKRLKL QGLEPPKLGPSPGFRELKWKKPVFAGDDVTYFVTLLDARPLESRPGIWLNITFNEGVNQSGETVLTFQSGVLEFD >Mature_155_residues MRLAELSPIGERVTLDTLHFSAEDIIRFARDFDPQPFHLDAEAARNSVFGGLCASGWHTGAGWMKSFLSHWAKEVKRLKL QGLEPPKLGPSPGFRELKWKKPVFAGDDVTYFVTLLDARPLESRPGIWLNITFNEGVNQSGETVLTFQSGVLEFD
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17375; Mature: 17375
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAELSPIGERVTLDTLHFSAEDIIRFARDFDPQPFHLDAEAARNSVFGGLCASGWHTG CCCCCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCCCEEECHHHHHHHHHCCHHCCCCCCC AGWMKSFLSHWAKEVKRLKLQGLEPPKLGPSPGFRELKWKKPVFAGDDVTYFVTLLDARP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCC LESRPGIWLNITFNEGVNQSGETVLTFQSGVLEFD CCCCCCEEEEEEECCCCCCCCCEEEEEECCCEECC >Mature Secondary Structure MRLAELSPIGERVTLDTLHFSAEDIIRFARDFDPQPFHLDAEAARNSVFGGLCASGWHTG CCCCCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCCCEEECHHHHHHHHHCCHHCCCCCCC AGWMKSFLSHWAKEVKRLKLQGLEPPKLGPSPGFRELKWKKPVFAGDDVTYFVTLLDARP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCC LESRPGIWLNITFNEGVNQSGETVLTFQSGVLEFD CCCCCCEEEEEEECCCCCCCCCEEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA