Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889418
Identifier: 15889418
GI number: 15889418
Start: 2102537
End: 2102917
Strand: Reverse
Name: 15889418
Synonym: Atu2137
Alternate gene names: NA
Gene position: 2102917-2102537 (Counterclockwise)
Preceding gene: 159185068
Following gene: 15889417
Centisome position: 74.01
GC content: 55.38
Gene sequence:
>381_bases GTGACCGCGAGATTCTCACTTTTTTCGTCACTGATCGCGGTGGCGTTGTTGGGTTTGCCTGTCGTTGTGCAGGCTGCTTC TTTTAAGGAACTTTCAGGGCAGGGCTACAAAGTTGGAGCCCTCTCGAGCAACAAAGCGGGAATTCGAGGCTGGAACCTGT CTAAAGGTTCCGACCGCTATTTTTGCGAGATGCGCGCGACCATGGCCTATTCCGGAAAGAATGGCATGGTGTCCTTCACG AGTGCCGGGCGCATGATTTCGCTTGATCGCAATACCGTTGCGAAAGGGCTGGGCGGTTCGCTGGATCTGCCCAAATATGA GGATCTCAAAGCCGGCCGGCTGCGGGCGGACGATGTGGGTTCCTGCCGCAAAGTGACATAA
Upstream 100 bases:
>100_bases AGAAGCGATCAAGGATCCGAGCTGCGGTGGTAATCCGGTGCCGATGACGCTTGAGAATACCAAGGCGCTTTTTGAGGCTT GCTTTTAAAAGGTAGACAGA
Downstream 100 bases:
>100_bases TCCACTGAACTGGAAGAAGCCCGCGTTACAAATCGCGGGCTTTTTGTTGCGCGGCAAACCGTTCTTAGCTTTTTGTTAAC CCTGTTCGTTAAGATTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTARFSLFSSLIAVALLGLPVVVQAASFKELSGQGYKVGALSSNKAGIRGWNLSKGSDRYFCEMRATMAYSGKNGMVSFT SAGRMISLDRNTVAKGLGGSLDLPKYEDLKAGRLRADDVGSCRKVT
Sequences:
>Translated_126_residues MTARFSLFSSLIAVALLGLPVVVQAASFKELSGQGYKVGALSSNKAGIRGWNLSKGSDRYFCEMRATMAYSGKNGMVSFT SAGRMISLDRNTVAKGLGGSLDLPKYEDLKAGRLRADDVGSCRKVT >Mature_125_residues TARFSLFSSLIAVALLGLPVVVQAASFKELSGQGYKVGALSSNKAGIRGWNLSKGSDRYFCEMRATMAYSGKNGMVSFTS AGRMISLDRNTVAKGLGGSLDLPKYEDLKAGRLRADDVGSCRKVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13407; Mature: 13275
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARFSLFSSLIAVALLGLPVVVQAASFKELSGQGYKVGALSSNKAGIRGWNLSKGSDRY CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEE FCEMRATMAYSGKNGMVSFTSAGRMISLDRNTVAKGLGGSLDLPKYEDLKAGRLRADDVG EEEEEEEEEECCCCCEEEECCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC SCRKVT CCCCCC >Mature Secondary Structure TARFSLFSSLIAVALLGLPVVVQAASFKELSGQGYKVGALSSNKAGIRGWNLSKGSDRY CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEE FCEMRATMAYSGKNGMVSFTSAGRMISLDRNTVAKGLGGSLDLPKYEDLKAGRLRADDVG EEEEEEEEEECCCCCEEEECCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC SCRKVT CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA