Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889413
Identifier: 15889413
GI number: 15889413
Start: 2097174
End: 2098007
Strand: Reverse
Name: 15889413
Synonym: Atu2132
Alternate gene names: NA
Gene position: 2098007-2097174 (Counterclockwise)
Preceding gene: 159185066
Following gene: 159185064
Centisome position: 73.83
GC content: 61.15
Gene sequence:
>834_bases TTGCGTTCGTTTCAGGCCGGCAGATCGCCACGCATTTTCCTCGATGAAACCTCCGTTTTCGATATCGGCGCCTGCGTCGT CAATGGAATCGATATCGCGCCCGGCCGCGCCATTCCCGATGATGGCGATGCGCGCATCGATCATTCGCTCGAAGGTTTTC TCTTCACCTGCGGCCCTGATCATATCCGCCATCCCGAGCCTATCGAGGGTGACGTTGAGGGGCGCCGGTATCCGTTGCAT GGCTCCTTCTCCTCGCATCCCGCGACCATCATCGCTTTCGACGTTCATGAGACCAATGCGCTGGCGCGCGTTGAGGTTCC CGTGAAGCTTGCCGACGGTGGCACTGCACTCCTGGAGCGGACATGGCGTATCGATGGCGAAAGCGGCGAAGTCAGCCTTG ATGACAGGGTCGTCAATACATCGGACCGGCCAATCCCGGTGTTCCTGATGTATCACATGAATATCGGCGCGCGCCTGTTT GACGATGCCGTGCGGCTTGAAGGCGCGATGATGGATGGTGGTGGCCACGGCTGGCGGTTTGGCGAGGAGCCGGGCAACGT TTTCTGCGTCTCCGCCGGCAAGAGCGAGTGGGCGGAATTGAAGCTGGGCCCGATCGCGGCCATCGGCGGCAAGACGCTGA CCGTCGGTTTTCGCACCGAGACCTTGCCCTATCTGCAGATATGGCGGAACCAGCAGGACCCGGCCAATGTGCTTGGCATC GAACCGGTTTCGCATCGCTGGGTGGGGCGCAGGGAGCTGGAGGCGGCCGGCGAGTTCAATATTCTCCAACCGGGCGAAAG CCGTTCCTTCGGCCTGCGCTTTTCCATCCTCTGA
Upstream 100 bases:
>100_bases ATTGTGAAAAAGGTGAATTCGCGGTTAATGCAATCTTAATTTTCCTCACAGTTAGTAGCGTTTCCGTGATTTCTGCGTTT TTACTGCCAAGGAGGTTGTC
Downstream 100 bases:
>100_bases GCCGTACCGAATGAAGATGTCCCGTCATTGACGCAGGGGTTTTGACCGCTTACATCGGATGCGGATTTCAAGGGTGACGG CCAGCGGAGGCATGAAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MRSFQAGRSPRIFLDETSVFDIGACVVNGIDIAPGRAIPDDGDARIDHSLEGFLFTCGPDHIRHPEPIEGDVEGRRYPLH GSFSSHPATIIAFDVHETNALARVEVPVKLADGGTALLERTWRIDGESGEVSLDDRVVNTSDRPIPVFLMYHMNIGARLF DDAVRLEGAMMDGGGHGWRFGEEPGNVFCVSAGKSEWAELKLGPIAAIGGKTLTVGFRTETLPYLQIWRNQQDPANVLGI EPVSHRWVGRRELEAAGEFNILQPGESRSFGLRFSIL
Sequences:
>Translated_277_residues MRSFQAGRSPRIFLDETSVFDIGACVVNGIDIAPGRAIPDDGDARIDHSLEGFLFTCGPDHIRHPEPIEGDVEGRRYPLH GSFSSHPATIIAFDVHETNALARVEVPVKLADGGTALLERTWRIDGESGEVSLDDRVVNTSDRPIPVFLMYHMNIGARLF DDAVRLEGAMMDGGGHGWRFGEEPGNVFCVSAGKSEWAELKLGPIAAIGGKTLTVGFRTETLPYLQIWRNQQDPANVLGI EPVSHRWVGRRELEAAGEFNILQPGESRSFGLRFSIL >Mature_277_residues MRSFQAGRSPRIFLDETSVFDIGACVVNGIDIAPGRAIPDDGDARIDHSLEGFLFTCGPDHIRHPEPIEGDVEGRRYPLH GSFSSHPATIIAFDVHETNALARVEVPVKLADGGTALLERTWRIDGESGEVSLDDRVVNTSDRPIPVFLMYHMNIGARLF DDAVRLEGAMMDGGGHGWRFGEEPGNVFCVSAGKSEWAELKLGPIAAIGGKTLTVGFRTETLPYLQIWRNQQDPANVLGI EPVSHRWVGRRELEAAGEFNILQPGESRSFGLRFSIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30401; Mature: 30401
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFQAGRSPRIFLDETSVFDIGACVVNGIDIAPGRAIPDDGDARIDHSLEGFLFTCGPD CCCCCCCCCCEEEEECCCEEEECHHEECCEEECCCCCCCCCCCCEECCCCCCEEEEECHH HIRHPEPIEGDVEGRRYPLHGSFSSHPATIIAFDVHETNALARVEVPVKLADGGTALLER HCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEE TWRIDGESGEVSLDDRVVNTSDRPIPVFLMYHMNIGARLFDDAVRLEGAMMDGGGHGWRF EEEECCCCCCEEECCEEECCCCCCEEEEEEEEECCCCHHHHHHHHEEEEEECCCCCCCCC GEEPGNVFCVSAGKSEWAELKLGPIAAIGGKTLTVGFRTETLPYLQIWRNQQDPANVLGI CCCCCCEEEEECCCCCCEEEEECEEEEECCCEEEEEEECCCCCHHHEECCCCCCCCEEEC EPVSHRWVGRRELEAAGEFNILQPGESRSFGLRFSIL CCCCCCCCCCHHHHCCCCCEEECCCCCCCEEEEEEEC >Mature Secondary Structure MRSFQAGRSPRIFLDETSVFDIGACVVNGIDIAPGRAIPDDGDARIDHSLEGFLFTCGPD CCCCCCCCCCEEEEECCCEEEECHHEECCEEECCCCCCCCCCCCEECCCCCCEEEEECHH HIRHPEPIEGDVEGRRYPLHGSFSSHPATIIAFDVHETNALARVEVPVKLADGGTALLER HCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEE TWRIDGESGEVSLDDRVVNTSDRPIPVFLMYHMNIGARLFDDAVRLEGAMMDGGGHGWRF EEEECCCCCCEEECCEEECCCCCCEEEEEEEEECCCCHHHHHHHHEEEEEECCCCCCCCC GEEPGNVFCVSAGKSEWAELKLGPIAAIGGKTLTVGFRTETLPYLQIWRNQQDPANVLGI CCCCCCEEEEECCCCCCEEEEECEEEEECCCEEEEEEECCCCCHHHEECCCCCCCCEEEC EPVSHRWVGRRELEAAGEFNILQPGESRSFGLRFSIL CCCCCCCCCCHHHHCCCCCEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA