Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889350
Identifier: 15889350
GI number: 15889350
Start: 2026847
End: 2028133
Strand: Reverse
Name: 15889350
Synonym: Atu2064
Alternate gene names: NA
Gene position: 2028133-2026847 (Counterclockwise)
Preceding gene: 159185036
Following gene: 159185031
Centisome position: 71.37
GC content: 63.48
Gene sequence:
>1287_bases ATGGCGTTTTCTGCTGCGGCCTATAATGGTGCCGGCTTTGCCGGTTCGTCTTCCGCCAAGAGAGGCAAATCCTCTTCGCT TGGACGGATGTCCGCGATTCTCGGCGGCGGCGCTTTTGCCGGTCTTTTCGCCTTTGCCGCCTTTGCCTCGCTGCACAGCA TGGCGGCGGCATCGCATGGCGTCGGGCAATTTGAGAAGACATTGGTGGCACGGCTCGATTCCGCCGAGACGGCGATCGGT CACACGGCCGTGCGTGACATTCACGTTCGCAAATTTTCCCGACTGAGCGATCACAGCCACGGCCAGCAGAAGGCCGTTCG CCTTGCCGGCATCATGCCCGAAATCGGCGCGAAGGAATTTCGCGAGCGCTTCGGTGCGGCCGCCAATGCCAAAGGGCAGG CGACGGTGAAGGAGCTTGCCGCGTTGAAGCCGTCGGCAATCGTCGATTCGGCGCTGGGTCGCACCTCCGAGGTTGCCTAT CAGAGCGCGGTTTCGCAGCATCCGGCATTTGAAGTGGCGCTGGCGCGGCCGCAGATCGAAGAAGAGGCAAGCAGCCTGCT TCCCGATGACGTGCCGCTGCCGAGTTTCAGGCCTGAAGTAGCAAGCGCCGAGGCAGTCGAGCCGTCACCGCGCCCCGCTG CGCCGTCCAAGGCCGAGGACCATGTTCCCGCTGTCGCCTCCGCGCCCGCTTTCGATGCACCGGTTCCCCTGCGCGCACCT GCGGCGCCGAAGCAGAGCACCGGCGCCATGCTTGCCTTTGCGAAGCCTGACAATCCCATGCGTGAGCCGAGCAAGATGGA TGCGGTTCCGTGGCCGGATCGCGGCAATGGCACGGCGATCTACGATATTTCCTCCGGCGTGGTGCATATGCCGAATGGTG AAAAGCTCGAAGCGCATTCCGGCATCGGCAAGATGCGCGACAATCCTGATTACGTGCATGTGAGGATGCGCGGCTCGACA CCGCCTTCCAGCTACCGCCTGACGATGCGCGAGGCCCGGTTCCATGGCGTCGAAGCCATTCGCCTGACACCGGAAAGCGG CGTCAATCCGCATGGCCGCGACGGCCTTCTCGCCCATACCTACATGCTGGCGAAACGCGGCGAATCGAATGGCTGCGTCG TGTTCCGCGACTATCCACGCTTCCTCGCGGCCTTCAAGCGCGGAGAGATCAAGCGCATGGTGGTGGTGCCGAAGCTGAAT GGAAACCGCCCGACGCTTGCGAGCAGTGGCGGCAAGAGCGGCGGCAAGACGCTGCTCGGCATGTTCTCGCGCGGCAACGA TTCCTGA
Upstream 100 bases:
>100_bases TCAGTTCCGAAACCGGCGTGGTGTCCGCCCGCCCTTCGGATGTCCCAAAGTCCCTCCGGCGTTGGCCGGGTATGCGTGAA CGGTTCGAGTAACGAGTATC
Downstream 100 bases:
>100_bases TCGCCTTTTGATCTTAGCGGAACGCCCTAGCGGCGGCGTCGCTGTGTCAGCACCATGCCGGCAAGGATGAGCAGGATGCC AAGCGCGCTTGCCCAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MAFSAAAYNGAGFAGSSSAKRGKSSSLGRMSAILGGGAFAGLFAFAAFASLHSMAAASHGVGQFEKTLVARLDSAETAIG HTAVRDIHVRKFSRLSDHSHGQQKAVRLAGIMPEIGAKEFRERFGAAANAKGQATVKELAALKPSAIVDSALGRTSEVAY QSAVSQHPAFEVALARPQIEEEASSLLPDDVPLPSFRPEVASAEAVEPSPRPAAPSKAEDHVPAVASAPAFDAPVPLRAP AAPKQSTGAMLAFAKPDNPMREPSKMDAVPWPDRGNGTAIYDISSGVVHMPNGEKLEAHSGIGKMRDNPDYVHVRMRGST PPSSYRLTMREARFHGVEAIRLTPESGVNPHGRDGLLAHTYMLAKRGESNGCVVFRDYPRFLAAFKRGEIKRMVVVPKLN GNRPTLASSGGKSGGKTLLGMFSRGNDS
Sequences:
>Translated_428_residues MAFSAAAYNGAGFAGSSSAKRGKSSSLGRMSAILGGGAFAGLFAFAAFASLHSMAAASHGVGQFEKTLVARLDSAETAIG HTAVRDIHVRKFSRLSDHSHGQQKAVRLAGIMPEIGAKEFRERFGAAANAKGQATVKELAALKPSAIVDSALGRTSEVAY QSAVSQHPAFEVALARPQIEEEASSLLPDDVPLPSFRPEVASAEAVEPSPRPAAPSKAEDHVPAVASAPAFDAPVPLRAP AAPKQSTGAMLAFAKPDNPMREPSKMDAVPWPDRGNGTAIYDISSGVVHMPNGEKLEAHSGIGKMRDNPDYVHVRMRGST PPSSYRLTMREARFHGVEAIRLTPESGVNPHGRDGLLAHTYMLAKRGESNGCVVFRDYPRFLAAFKRGEIKRMVVVPKLN GNRPTLASSGGKSGGKTLLGMFSRGNDS >Mature_427_residues AFSAAAYNGAGFAGSSSAKRGKSSSLGRMSAILGGGAFAGLFAFAAFASLHSMAAASHGVGQFEKTLVARLDSAETAIGH TAVRDIHVRKFSRLSDHSHGQQKAVRLAGIMPEIGAKEFRERFGAAANAKGQATVKELAALKPSAIVDSALGRTSEVAYQ SAVSQHPAFEVALARPQIEEEASSLLPDDVPLPSFRPEVASAEAVEPSPRPAAPSKAEDHVPAVASAPAFDAPVPLRAPA APKQSTGAMLAFAKPDNPMREPSKMDAVPWPDRGNGTAIYDISSGVVHMPNGEKLEAHSGIGKMRDNPDYVHVRMRGSTP PSSYRLTMREARFHGVEAIRLTPESGVNPHGRDGLLAHTYMLAKRGESNGCVVFRDYPRFLAAFKRGEIKRMVVVPKLNG NRPTLASSGGKSGGKTLLGMFSRGNDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45098; Mature: 44966
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSAAAYNGAGFAGSSSAKRGKSSSLGRMSAILGGGAFAGLFAFAAFASLHSMAAASHG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC VGQFEKTLVARLDSAETAIGHTAVRDIHVRKFSRLSDHSHGQQKAVRLAGIMPEIGAKEF CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH RERFGAAANAKGQATVKELAALKPSAIVDSALGRTSEVAYQSAVSQHPAFEVALARPQIE HHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCHH EEASSLLPDDVPLPSFRPEVASAEAVEPSPRPAAPSKAEDHVPAVASAPAFDAPVPLRAP HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC AAPKQSTGAMLAFAKPDNPMREPSKMDAVPWPDRGNGTAIYDISSGVVHMPNGEKLEAHS CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCEEEHHC GIGKMRDNPDYVHVRMRGSTPPSSYRLTMREARFHGVEAIRLTPESGVNPHGRDGLLAHT CCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHH YMLAKRGESNGCVVFRDYPRFLAAFKRGEIKRMVVVPKLNGNRPTLASSGGKSGGKTLLG HHHHHCCCCCCEEEECCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHH MFSRGNDS CCCCCCCC >Mature Secondary Structure AFSAAAYNGAGFAGSSSAKRGKSSSLGRMSAILGGGAFAGLFAFAAFASLHSMAAASHG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC VGQFEKTLVARLDSAETAIGHTAVRDIHVRKFSRLSDHSHGQQKAVRLAGIMPEIGAKEF CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH RERFGAAANAKGQATVKELAALKPSAIVDSALGRTSEVAYQSAVSQHPAFEVALARPQIE HHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCHH EEASSLLPDDVPLPSFRPEVASAEAVEPSPRPAAPSKAEDHVPAVASAPAFDAPVPLRAP HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC AAPKQSTGAMLAFAKPDNPMREPSKMDAVPWPDRGNGTAIYDISSGVVHMPNGEKLEAHS CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCEEEHHC GIGKMRDNPDYVHVRMRGSTPPSSYRLTMREARFHGVEAIRLTPESGVNPHGRDGLLAHT CCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHH YMLAKRGESNGCVVFRDYPRFLAAFKRGEIKRMVVVPKLNGNRPTLASSGGKSGGKTLLG HHHHHCCCCCCEEEECCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHH MFSRGNDS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA