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The map label for this gene is 15889313

Identifier: 15889313

GI number: 15889313

Start: 1986648

End: 1987343

Strand: Direct

Name: 15889313

Synonym: Atu2025

Alternate gene names: NA

Gene position: 1986648-1987343 (Clockwise)

Preceding gene: 159185013

Following gene: 159185017

Centisome position: 69.91

GC content: 59.63

Gene sequence:

>696_bases
ATGCAGGATGGCAGGATGCCGTTTGAACACGGCGACGAGGACAAACCCAATCTCAGGATCAGCAGCTTTCTACCGGATGT
GAGCCTGCCTTCCTCCCTGCCCGCCGAACCGGTTCCCATCGCCGACATGGCCAATATTTTCGGAGTGACCCACCGGACAC
TGCATTTTTACGAGGAAAAGGCACTGCTGACCTCGAAGCGCATCGGCCAGATGCGCGTTTATACCCACCGCAACGTTCAG
CGCATGGCCGTCATCAACGTCTGTCGCGAAGTGGGCATCTCCGTTGCCGCGATTACCGAAATCATGGAAAAACTCGTCCG
GTCGCTCTCGCAGGAAGAGGCGGACGACATATTCCACGCCGCATTGCGGCAGCGGAAGAGAGAATTGACCTCCGAGCTTT
CCACCCTCCAGCGTCAGGCCCAGCAGATCGAGGAATTGCTGGTGACGGAGACGGATGCGGACGGCATGGATGGCACTGAG
CGGGCACCGGCAAAGGACATCGCCCTCACCGACACCGAACGTAAATGCCTGGAACTGATGGCGGAGGGTTATGCGCCAGT
GCGGCTTGCCCGCGCCCTTGGCCTTTCAGGCAGCGATCTCAACACGCTGGAGGCAAAGATCATCGGCAAGTTCAGTGCCA
GCAACCGCTTTCAGGCGGTCGCCAAGGCGGTTCTGCTCGGCGTCATCCGTGCCTGA

Upstream 100 bases:

>100_bases
GGCATGATGTCTTGATCAGAAGACGGGCCCGCGACGGGGGAACGAATAACGGATGCCATAAAAAGCAGGCACACTGTCAA
AAAGCGTGAAGGGGGAGACG

Downstream 100 bases:

>100_bases
TCAACGAACGATCGTCAGGGTTTCGGCCGCGCGGGTGATGGCAGTGTAAAGCCATCTTTCGCGAGAATCACGGAAAGCAT
AGCTCTCGTCGAAGAGAACC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Nodulation Protein

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MQDGRMPFEHGDEDKPNLRISSFLPDVSLPSSLPAEPVPIADMANIFGVTHRTLHFYEEKALLTSKRIGQMRVYTHRNVQ
RMAVINVCREVGISVAAITEIMEKLVRSLSQEEADDIFHAALRQRKRELTSELSTLQRQAQQIEELLVTETDADGMDGTE
RAPAKDIALTDTERKCLELMAEGYAPVRLARALGLSGSDLNTLEAKIIGKFSASNRFQAVAKAVLLGVIRA

Sequences:

>Translated_231_residues
MQDGRMPFEHGDEDKPNLRISSFLPDVSLPSSLPAEPVPIADMANIFGVTHRTLHFYEEKALLTSKRIGQMRVYTHRNVQ
RMAVINVCREVGISVAAITEIMEKLVRSLSQEEADDIFHAALRQRKRELTSELSTLQRQAQQIEELLVTETDADGMDGTE
RAPAKDIALTDTERKCLELMAEGYAPVRLARALGLSGSDLNTLEAKIIGKFSASNRFQAVAKAVLLGVIRA
>Mature_231_residues
MQDGRMPFEHGDEDKPNLRISSFLPDVSLPSSLPAEPVPIADMANIFGVTHRTLHFYEEKALLTSKRIGQMRVYTHRNVQ
RMAVINVCREVGISVAAITEIMEKLVRSLSQEEADDIFHAALRQRKRELTSELSTLQRQAQQIEELLVTETDADGMDGTE
RAPAKDIALTDTERKCLELMAEGYAPVRLARALGLSGSDLNTLEAKIIGKFSASNRFQAVAKAVLLGVIRA

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25630; Mature: 25630

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50043 HTH_LUXR_2 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDGRMPFEHGDEDKPNLRISSFLPDVSLPSSLPAEPVPIADMANIFGVTHRTLHFYEEK
CCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALLTSKRIGQMRVYTHRNVQRMAVINVCREVGISVAAITEIMEKLVRSLSQEEADDIFHA
HHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRQRKRELTSELSTLQRQAQQIEELLVTETDADGMDGTERAPAKDIALTDTERKCLELM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AEGYAPVRLARALGLSGSDLNTLEAKIIGKFSASNRFQAVAKAVLLGVIRA
HCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQDGRMPFEHGDEDKPNLRISSFLPDVSLPSSLPAEPVPIADMANIFGVTHRTLHFYEEK
CCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALLTSKRIGQMRVYTHRNVQRMAVINVCREVGISVAAITEIMEKLVRSLSQEEADDIFHA
HHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRQRKRELTSELSTLQRQAQQIEELLVTETDADGMDGTERAPAKDIALTDTERKCLELM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AEGYAPVRLARALGLSGSDLNTLEAKIIGKFSASNRFQAVAKAVLLGVIRA
HCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA