Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is dnaJ [C]

Identifier: 15889295

GI number: 15889295

Start: 1968719

End: 1969321

Strand: Reverse

Name: dnaJ [C]

Synonym: Atu2006

Alternate gene names: 15889295

Gene position: 1969321-1968719 (Counterclockwise)

Preceding gene: 159185011

Following gene: 17935890

Centisome position: 69.3

GC content: 60.7

Gene sequence:

>603_bases
GTGATCGATCCCTATGTTTTGCTTGGCGTGGAGCGCGATGCCGACGAGGCGGCGATCAAGACGGCCTACCGCAAGGTGGC
CAAGGCCGCGCATCCCGACAGCGGCGGTGATGGCGAGCAATTTGCGCGCCTGCAAACGGCTTATGAGCTTCTGAAGGATC
CGGTGCGCCGCAGGGTGTTCGACGATACGGGTTACGATCCGCAGCTTGCCGACGCCAAGGATCTCAAGGGCCTGCTGATG
CTGGAAACGCTGGTCAATGAATTCATCCTGGATGAGCGCGAGCCCGGCAGTTTCGATCCCGTGGCGGCCATGCGCCGCAA
GCTGACGGACGATATTCTGAAAAGCCGTTTCCATATTCTCGAGCTGGAACGGCACCGCACGCGCGTGCGCAAACACATGG
ACCGCCTGGGCCGCAAGCCGGAGACTGATGTGCTGAGTTCCATGCTGCGTGCCCGCAGCCAGTCCATCGCCGAAGCTATT
CGCAACGCCGAAACCCAGATCGAGGCGATCGAGCAGGCCTATACGATGCTGGAGGGTTATTCCTACGAGCTGGAGACCGT
GACGCTAGCCGAACCTCTCTTGAAAGGCGAAGCGGCGGAATAA

Upstream 100 bases:

>100_bases
GGGGTGCCGCACGGGGCGGAATTGGCCTATGATCCGGCGGCAGGCCTCAGGAGCGCGGCATCGGGCATGCGGGTAACAGT
TTGCGTTTGAAGGTGTTTTT

Downstream 100 bases:

>100_bases
GTCCGGCCGCTCAGGGGCCGTTTGCCAGCGTGAGGATGAGCTGGTGCACCCGCCCGCCCGGCGAGAGCTCGTCACGGTCG
AAATCGCGGCCGCGCTGGCG

Product: DnaJ family molecular chaperone

Products: NA

Alternate protein names: Molecular Chaperone; Heat Shock Protein DNAJ; Chaperone Protein DNAJ; DNAJ Family Molecular Chaperone; Molecular Chaperone DNAJ Family; Chaperone; Heat Shock Protein DNAJ Domain Protein; Heat Shock Protein DNAJ Domain-Containing Protein

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MIDPYVLLGVERDADEAAIKTAYRKVAKAAHPDSGGDGEQFARLQTAYELLKDPVRRRVFDDTGYDPQLADAKDLKGLLM
LETLVNEFILDEREPGSFDPVAAMRRKLTDDILKSRFHILELERHRTRVRKHMDRLGRKPETDVLSSMLRARSQSIAEAI
RNAETQIEAIEQAYTMLEGYSYELETVTLAEPLLKGEAAE

Sequences:

>Translated_200_residues
MIDPYVLLGVERDADEAAIKTAYRKVAKAAHPDSGGDGEQFARLQTAYELLKDPVRRRVFDDTGYDPQLADAKDLKGLLM
LETLVNEFILDEREPGSFDPVAAMRRKLTDDILKSRFHILELERHRTRVRKHMDRLGRKPETDVLSSMLRARSQSIAEAI
RNAETQIEAIEQAYTMLEGYSYELETVTLAEPLLKGEAAE
>Mature_200_residues
MIDPYVLLGVERDADEAAIKTAYRKVAKAAHPDSGGDGEQFARLQTAYELLKDPVRRRVFDDTGYDPQLADAKDLKGLLM
LETLVNEFILDEREPGSFDPVAAMRRKLTDDILKSRFHILELERHRTRVRKHMDRLGRKPETDVLSSMLRARSQSIAEAI
RNAETQIEAIEQAYTMLEGYSYELETVTLAEPLLKGEAAE

Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22720; Mature: 22720

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPYVLLGVERDADEAAIKTAYRKVAKAAHPDSGGDGEQFARLQTAYELLKDPVRRRVF
CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DDTGYDPQLADAKDLKGLLMLETLVNEFILDEREPGSFDPVAAMRRKLTDDILKSRFHIL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ELERHRTRVRKHMDRLGRKPETDVLSSMLRARSQSIAEAIRNAETQIEAIEQAYTMLEGY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYELETVTLAEPLLKGEAAE
CCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIDPYVLLGVERDADEAAIKTAYRKVAKAAHPDSGGDGEQFARLQTAYELLKDPVRRRVF
CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DDTGYDPQLADAKDLKGLLMLETLVNEFILDEREPGSFDPVAAMRRKLTDDILKSRFHIL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ELERHRTRVRKHMDRLGRKPETDVLSSMLRARSQSIAEAIRNAETQIEAIEQAYTMLEGY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYELETVTLAEPLLKGEAAE
CCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA