Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is dnaJ [C]
Identifier: 15889295
GI number: 15889295
Start: 1968719
End: 1969321
Strand: Reverse
Name: dnaJ [C]
Synonym: Atu2006
Alternate gene names: 15889295
Gene position: 1969321-1968719 (Counterclockwise)
Preceding gene: 159185011
Following gene: 17935890
Centisome position: 69.3
GC content: 60.7
Gene sequence:
>603_bases GTGATCGATCCCTATGTTTTGCTTGGCGTGGAGCGCGATGCCGACGAGGCGGCGATCAAGACGGCCTACCGCAAGGTGGC CAAGGCCGCGCATCCCGACAGCGGCGGTGATGGCGAGCAATTTGCGCGCCTGCAAACGGCTTATGAGCTTCTGAAGGATC CGGTGCGCCGCAGGGTGTTCGACGATACGGGTTACGATCCGCAGCTTGCCGACGCCAAGGATCTCAAGGGCCTGCTGATG CTGGAAACGCTGGTCAATGAATTCATCCTGGATGAGCGCGAGCCCGGCAGTTTCGATCCCGTGGCGGCCATGCGCCGCAA GCTGACGGACGATATTCTGAAAAGCCGTTTCCATATTCTCGAGCTGGAACGGCACCGCACGCGCGTGCGCAAACACATGG ACCGCCTGGGCCGCAAGCCGGAGACTGATGTGCTGAGTTCCATGCTGCGTGCCCGCAGCCAGTCCATCGCCGAAGCTATT CGCAACGCCGAAACCCAGATCGAGGCGATCGAGCAGGCCTATACGATGCTGGAGGGTTATTCCTACGAGCTGGAGACCGT GACGCTAGCCGAACCTCTCTTGAAAGGCGAAGCGGCGGAATAA
Upstream 100 bases:
>100_bases GGGGTGCCGCACGGGGCGGAATTGGCCTATGATCCGGCGGCAGGCCTCAGGAGCGCGGCATCGGGCATGCGGGTAACAGT TTGCGTTTGAAGGTGTTTTT
Downstream 100 bases:
>100_bases GTCCGGCCGCTCAGGGGCCGTTTGCCAGCGTGAGGATGAGCTGGTGCACCCGCCCGCCCGGCGAGAGCTCGTCACGGTCG AAATCGCGGCCGCGCTGGCG
Product: DnaJ family molecular chaperone
Products: NA
Alternate protein names: Molecular Chaperone; Heat Shock Protein DNAJ; Chaperone Protein DNAJ; DNAJ Family Molecular Chaperone; Molecular Chaperone DNAJ Family; Chaperone; Heat Shock Protein DNAJ Domain Protein; Heat Shock Protein DNAJ Domain-Containing Protein
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MIDPYVLLGVERDADEAAIKTAYRKVAKAAHPDSGGDGEQFARLQTAYELLKDPVRRRVFDDTGYDPQLADAKDLKGLLM LETLVNEFILDEREPGSFDPVAAMRRKLTDDILKSRFHILELERHRTRVRKHMDRLGRKPETDVLSSMLRARSQSIAEAI RNAETQIEAIEQAYTMLEGYSYELETVTLAEPLLKGEAAE
Sequences:
>Translated_200_residues MIDPYVLLGVERDADEAAIKTAYRKVAKAAHPDSGGDGEQFARLQTAYELLKDPVRRRVFDDTGYDPQLADAKDLKGLLM LETLVNEFILDEREPGSFDPVAAMRRKLTDDILKSRFHILELERHRTRVRKHMDRLGRKPETDVLSSMLRARSQSIAEAI RNAETQIEAIEQAYTMLEGYSYELETVTLAEPLLKGEAAE >Mature_200_residues MIDPYVLLGVERDADEAAIKTAYRKVAKAAHPDSGGDGEQFARLQTAYELLKDPVRRRVFDDTGYDPQLADAKDLKGLLM LETLVNEFILDEREPGSFDPVAAMRRKLTDDILKSRFHILELERHRTRVRKHMDRLGRKPETDVLSSMLRARSQSIAEAI RNAETQIEAIEQAYTMLEGYSYELETVTLAEPLLKGEAAE
Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22720; Mature: 22720
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPYVLLGVERDADEAAIKTAYRKVAKAAHPDSGGDGEQFARLQTAYELLKDPVRRRVF CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DDTGYDPQLADAKDLKGLLMLETLVNEFILDEREPGSFDPVAAMRRKLTDDILKSRFHIL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ELERHRTRVRKHMDRLGRKPETDVLSSMLRARSQSIAEAIRNAETQIEAIEQAYTMLEGY HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SYELETVTLAEPLLKGEAAE CCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIDPYVLLGVERDADEAAIKTAYRKVAKAAHPDSGGDGEQFARLQTAYELLKDPVRRRVF CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DDTGYDPQLADAKDLKGLLMLETLVNEFILDEREPGSFDPVAAMRRKLTDDILKSRFHIL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ELERHRTRVRKHMDRLGRKPETDVLSSMLRARSQSIAEAIRNAETQIEAIEQAYTMLEGY HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SYELETVTLAEPLLKGEAAE CCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA