Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185011
Identifier: 159185011
GI number: 159185011
Start: 1972179
End: 1973138
Strand: Reverse
Name: 159185011
Synonym: Atu2011
Alternate gene names: NA
Gene position: 1973138-1972179 (Counterclockwise)
Preceding gene: 15889300
Following gene: 15889295
Centisome position: 69.44
GC content: 60.1
Gene sequence:
>960_bases ATGGTGTCTTCCACCGATGATACCCGCCAGCTTTCAGCGCTCGCCATTGCGGATGCGGATGCCGATATCCTTTGCCTGCA GGAAGTCGACAACATGGCGGCGTTGCAGGCCTTTGAATATGGTTATCTCTATCGCATGGTCGGCAATGGCTATCTGCAGA AATATCTGGTCGAGGGCAATGACAGCCGCGGCATCGATGTCGCCGTTGTCATGCGCGAAGAGACGCGCGACGGTGACAAG ATCGAGGTGGTCGACATCAAGAGCCATGCGGCGCTGACCTATCGCAACCTCGATCTCTTCAATCCCGCACTCGCCGCGAC CAACCAGATCGATGACAAGATTTTCAAACGGGATTGCCTGGAAATTGACCTCCGGATCGGCGGCAAGCCGCTGACCCTTT ACGTCACGCATTTCAAATCCATGACCAATGCCCGCGATGCGGTGGATGCGCGGATCGCGACCATGCCGATCCGCGAGGCT GAAGCCATGGCGGTTCGCCGCATCATCGAAAACCGCTGGGGGGTGGGCAATACCCGCAACAAGAATTTCGCGATCTGCGG CGATATGAACGACTATCAGGAGCGCGTTGCGATTTCCGGCGACAGGCGCAGCGGCTACAGCTTCACGCCCGTCGAGGAGG AGCGCAGTGCGCTCGATATCTTCACGGCCGATGGCTTCGTGGTCAATCCGATGACGCGCCGCGACGTCATGGATCGCTGG ACGCTCTACCATTCGCGCGGGCCGCAGGAGCAGCATCTGTGCCAGCTCGATTATGTCTGGCTTTCCCCGCGCCTGGCGGA AACGAGCGCTACGCACGTTCCTGAAATCATCCGCAACGGGCAGCCTTTCCGCACGGTTTTCCCGCCGGGGCAGGAGGTGG AGCGTTACCCCCGCACCGGCTGGGATCGCCCGAAGGCGTCCGACCATTGCCCTGTCGTGATGACGCTGGACCTGATCTAG
Upstream 100 bases:
>100_bases CGATTTCACCGGCTTCCGCAACCAGACGCGGCGCGACAGGGCGATCCAGCTTTTCGATATCAGGGACGAGGCCACCTATC AGGCGTTGGAAAGCGCGCGC
Downstream 100 bases:
>100_bases GCGCGGCGGAATTTGTGACCGGCGGTGCCGTCTAGCCGTTCGCGACCTTCGGAAAATAGGTTGCCCACACCCGGTTGCGG CCCGCGCGCTTGGCTTCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Exo/Endo Phosphatase; Endonuclease/Exonuclease/Phosphatase Family Protein
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MVSSTDDTRQLSALAIADADADILCLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGNDSRGIDVAVVMREETRDGDK IEVVDIKSHAALTYRNLDLFNPALAATNQIDDKIFKRDCLEIDLRIGGKPLTLYVTHFKSMTNARDAVDARIATMPIREA EAMAVRRIIENRWGVGNTRNKNFAICGDMNDYQERVAISGDRRSGYSFTPVEEERSALDIFTADGFVVNPMTRRDVMDRW TLYHSRGPQEQHLCQLDYVWLSPRLAETSATHVPEIIRNGQPFRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLI
Sequences:
>Translated_319_residues MVSSTDDTRQLSALAIADADADILCLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGNDSRGIDVAVVMREETRDGDK IEVVDIKSHAALTYRNLDLFNPALAATNQIDDKIFKRDCLEIDLRIGGKPLTLYVTHFKSMTNARDAVDARIATMPIREA EAMAVRRIIENRWGVGNTRNKNFAICGDMNDYQERVAISGDRRSGYSFTPVEEERSALDIFTADGFVVNPMTRRDVMDRW TLYHSRGPQEQHLCQLDYVWLSPRLAETSATHVPEIIRNGQPFRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLI >Mature_319_residues MVSSTDDTRQLSALAIADADADILCLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGNDSRGIDVAVVMREETRDGDK IEVVDIKSHAALTYRNLDLFNPALAATNQIDDKIFKRDCLEIDLRIGGKPLTLYVTHFKSMTNARDAVDARIATMPIREA EAMAVRRIIENRWGVGNTRNKNFAICGDMNDYQERVAISGDRRSGYSFTPVEEERSALDIFTADGFVVNPMTRRDVMDRW TLYHSRGPQEQHLCQLDYVWLSPRLAETSATHVPEIIRNGQPFRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36217; Mature: 36217
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSSTDDTRQLSALAIADADADILCLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGN CCCCCCCHHHEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHEEEECCCHHHEEHEECCC DSRGIDVAVVMREETRDGDKIEVVDIKSHAALTYRNLDLFNPALAATNQIDDKIFKRDCL CCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHCE EIDLRIGGKPLTLYVTHFKSMTNARDAVDARIATMPIREAEAMAVRRIIENRWGVGNTRN EEEEEECCEEEEEEEEEHHHHCCHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCCCC KNFAICGDMNDYQERVAISGDRRSGYSFTPVEEERSALDIFTADGFVVNPMTRRDVMDRW CCEEEECCCCHHHHHEEECCCCCCCCCCCCCHHCCCEEEEEECCCEEECCHHHHHHHHHH TLYHSRGPQEQHLCQLDYVWLSPRLAETSATHVPEIIRNGQPFRTVFPPGQEVERYPRTG HHHHCCCCCHHHEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHHCCCCC WDRPKASDHCPVVMTLDLI CCCCCCCCCCCEEEEEECC >Mature Secondary Structure MVSSTDDTRQLSALAIADADADILCLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGN CCCCCCCHHHEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHEEEECCCHHHEEHEECCC DSRGIDVAVVMREETRDGDKIEVVDIKSHAALTYRNLDLFNPALAATNQIDDKIFKRDCL CCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHCE EIDLRIGGKPLTLYVTHFKSMTNARDAVDARIATMPIREAEAMAVRRIIENRWGVGNTRN EEEEEECCEEEEEEEEEHHHHCCHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCCCC KNFAICGDMNDYQERVAISGDRRSGYSFTPVEEERSALDIFTADGFVVNPMTRRDVMDRW CCEEEECCCCHHHHHEEECCCCCCCCCCCCCHHCCCEEEEEECCCEEECCHHHHHHHHHH TLYHSRGPQEQHLCQLDYVWLSPRLAETSATHVPEIIRNGQPFRTVFPPGQEVERYPRTG HHHHCCCCCHHHEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHHCCCCC WDRPKASDHCPVVMTLDLI CCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA