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The map label for this gene is yedZ

Identifier: 15889214

GI number: 15889214

Start: 1898565

End: 1899212

Strand: Direct

Name: yedZ

Synonym: Atu1920

Alternate gene names: 15889214

Gene position: 1898565-1899212 (Clockwise)

Preceding gene: 159184979

Following gene: 159184980

Centisome position: 66.81

GC content: 59.72

Gene sequence:

>648_bases
ATGGCCTTTGCCCTGTCGCTTCCGTCGCTGCCCAAGCGTTACCAGCCGGCGGCCATCTGGTCGCTGTATGTCATCGGCCT
CTGTCCCGGCCTCTGGTATTTTTACCTCGCCGCAACCGGCGGCCTCGGCTTCAACCCGGTCAAGGATTTCGAGCACCTGC
TCGGCATCTGGGCGCTGCGGTTTTTGTGCCTCGGCCTGTTGGTGACGCCGCTGCGCGATCTCTTCAACGTCAATCTTATT
GCCTATCGCCGGGCGCTGGGTCTGATCGCCTTTTATTATGTGCTCGCCCATTTCACCGTCTATCTGGTGCTGGATCGCGG
GCTGATACTCGGCTCCATTGCCGGCGACATTCTCAAACGCCCCTACATCATGCTCGGCATGGCGGGGCTCATCATACTCA
TTCCGCTGGCGCTCACCTCCAACCGCTGGTCGATCCGCCGTCTCGGCAGCCGCTGGAACACACTGCACAAGCTCGTATAT
CTCGTCCTCATCGTCGGCGTGCTGCATTTCGTGCTGGCCCGGAAATCGATCACGCTGGAGCCGGTATTTTATATCAGCAC
CATGGTTGTCTTGCTGGGCTATCGGCTGGTGCGGCCCTCGATCATGACGATGAAGAGGAATAAGCGCGCAAGGCCCGTCC
GGACGTAA

Upstream 100 bases:

>100_bases
GCTTTTTCGGCACGCAAAACCGCCCTACCCTGATGTTCAACGGTTATGACGACGTCGCGAGCCTCTATACCGGGCTGGAT
CTGAAAGCGAATTACTGATC

Downstream 100 bases:

>100_bases
AGGACGCCACCGCGATCCCGCCGATATAACAGACGATATTCCACACGGAGAAAACGCGGCCGAGCAGCAAAGCTCCGGCC
GCCGTTGCGCGAAACGCGTC

Product: putative sulfite oxidase subunit YedZ

Products: NA

Alternate protein names: Flavocytochrome yedZ

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MAFALSLPSLPKRYQPAAIWSLYVIGLCPGLWYFYLAATGGLGFNPVKDFEHLLGIWALRFLCLGLLVTPLRDLFNVNLI
AYRRALGLIAFYYVLAHFTVYLVLDRGLILGSIAGDILKRPYIMLGMAGLIILIPLALTSNRWSIRRLGSRWNTLHKLVY
LVLIVGVLHFVLARKSITLEPVFYISTMVVLLGYRLVRPSIMTMKRNKRARPVRT

Sequences:

>Translated_215_residues
MAFALSLPSLPKRYQPAAIWSLYVIGLCPGLWYFYLAATGGLGFNPVKDFEHLLGIWALRFLCLGLLVTPLRDLFNVNLI
AYRRALGLIAFYYVLAHFTVYLVLDRGLILGSIAGDILKRPYIMLGMAGLIILIPLALTSNRWSIRRLGSRWNTLHKLVY
LVLIVGVLHFVLARKSITLEPVFYISTMVVLLGYRLVRPSIMTMKRNKRARPVRT
>Mature_214_residues
AFALSLPSLPKRYQPAAIWSLYVIGLCPGLWYFYLAATGGLGFNPVKDFEHLLGIWALRFLCLGLLVTPLRDLFNVNLIA
YRRALGLIAFYYVLAHFTVYLVLDRGLILGSIAGDILKRPYIMLGMAGLIILIPLALTSNRWSIRRLGSRWNTLHKLVYL
VLIVGVLHFVLARKSITLEPVFYISTMVVLLGYRLVRPSIMTMKRNKRARPVRT

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family

Homologues:

Organism=Escherichia coli, GI1788283, Length=166, Percent_Identity=40.3614457831325, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEDZ_AGRT5 (P58769)

Other databases:

- EMBL:   AE007869
- PIR:   AF2812
- PIR:   G97590
- RefSeq:   NP_354895.1
- STRING:   P58769
- GeneID:   1133958
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu1920
- eggNOG:   COG2717
- HOGENOM:   HBG751530
- OMA:   ILGLDWG
- PhylomeDB:   P58769
- ProtClustDB:   PRK05419
- BioCyc:   ATUM176299-1:ATU1920-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01207
- InterPro:   IPR013130
- InterPro:   IPR022837

Pfam domain/function: PF01794 Ferric_reduct

EC number: NA

Molecular weight: Translated: 24422; Mature: 24291

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf5c46a8)-; HASH(0xc7cec78)-; HASH(0xfabb050)-; HASH(0xf1827c0)-; HASH(0xf273270)-; HASH(0xcbe5150)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFALSLPSLPKRYQPAAIWSLYVIGLCPGLWYFYLAATGGLGFNPVKDFEHLLGIWALR
CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
FLCLGLLVTPLRDLFNVNLIAYRRALGLIAFYYVLAHFTVYLVLDRGLILGSIAGDILKR
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
PYIMLGMAGLIILIPLALTSNRWSIRRLGSRWNTLHKLVYLVLIVGVLHFVLARKSITLE
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PVFYISTMVVLLGYRLVRPSIMTMKRNKRARPVRT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure 
AFALSLPSLPKRYQPAAIWSLYVIGLCPGLWYFYLAATGGLGFNPVKDFEHLLGIWALR
CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
FLCLGLLVTPLRDLFNVNLIAYRRALGLIAFYYVLAHFTVYLVLDRGLILGSIAGDILKR
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
PYIMLGMAGLIILIPLALTSNRWSIRRLGSRWNTLHKLVYLVLIVGVLHFVLARKSITLE
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PVFYISTMVVLLGYRLVRPSIMTMKRNKRARPVRT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194