Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is glnA [H]
Identifier: 15889073
GI number: 15889073
Start: 1754245
End: 1755654
Strand: Direct
Name: glnA [H]
Synonym: Atu1770
Alternate gene names: 15889073
Gene position: 1754245-1755654 (Clockwise)
Preceding gene: 159184909
Following gene: 15889074
Centisome position: 61.73
GC content: 59.08
Gene sequence:
>1410_bases ATGACGACCGCAAACGATATCTTGAAGCAGATCAAGGATAACGACATCAAGTTCGTGGACCTGCGCTTTACCGATCCCAA GGGTAAGCTGCAGCACGTCACCATGGATGTTGTCTGTGTGGACGAAGACATGTTCGCCGATGGCGTCATGTTCGACGGCT CCTCGATCGCCGGCTGGAAGGCCATCAACGAGTCCGACATGGTGCTGATGCCCGATCCGGCCACCGCCCACATCGACCCG TTCTTTGCCCAGTCTACCCTGGTCGTCCTTTGCGACATTCTCGACCCGGTTTCGGGCGAAGCCTATAACCGCGACCCGCG CGGCACCGCGAAGAAAGCCGAAGCCTACCTCAAGGCCTCTGGTATCGGCGACACCGTTTTCGTCGGCCCCGAGCCGGAAT TCTTCGTCTTCGACGACGTGAAGTACAAGGCAGACCCCTACAACACCGGCTTCAAGCTTGATTCGTCCGAACTGCCGTCC AACGACGACACGGATTACGAAACCGGCAACCTCGGCCACCGTCCGCGCGTCAAGGGCGGCTACTTCCCGGTTCCGCCGAT CGACAGCCTGCAGGACATGCGTTCTGAAATGCTGACGGTTCTGGCCGAAATGGGCGTCGTCGTTGAAAAGCACCACCACG AAGTGGCTGCCGCACAGCACGAGCTGGGCGTGAAGTTCGACACGCTGGTTTCCAGCGCCGACAAGATGCAGATCTACAAG TACGTCGTGCACCAGGTCGCCAATGCCTATGGCAAGACGGCAACCTTCATGCCGAAGCCGATCTTCGGCGATAATGGCTC GGGCATGCACGTTCACCAGTCGATCTGGAAGGGCGGCAAGCCGACCTTCGCTGGCGACGAATATGCTGGCCTGTCCGAAA ATTGCCTCTACTACATCGGCGGCATCATCAAGCATGCCAAGGCAATCAACGCCTTCACCAACCCTACCACCAACTCCTAC AAGCGTCTGGTGCCGGGTTACGAAGCGCCGGTTCTGCTCGCCTACTCCGCGCGCAACCGCTCCGCATCGTGCCGTATTCC CTTCGGCTCCAACCCGAAGGCAAAGCGCGTCGAAGTCCGCTTCCCGGACCCGACCCAGAACCCCTATCTCGGTTTTGCGG CCATGCTGATGGCCGGCCTCGACGGCATCAAGAACAAGATCCACCCCGGCAAGCCGATGGACAAGGACCTTTACGATCTT CCTGCCAAGGAACTGAAGAAGATCCCGACCGTCTGCGGCTCGCTGCGTGAAGCGCTGGAAAGCCTCGACAAGGATCGCAA GTTCCTGACCGCCGGCGGCGTGTTCGACGACGACCAGATCGACTCCTTCATCGAACTGAAGATGCAGGAAGTCATGCGTT TCGAAATGACCCCGCATCCGGTCGAATTCGACATGTACTACTCGGCCTGA
Upstream 100 bases:
>100_bases CGGTGAAACAGGCGTGGACGCCATATAATCAGAACCAGGTCTCAAGCCGGGGAGGCTTGGGTTTCACCTCGTCATCATCA CACTCAAGGAAAACGTTTAA
Downstream 100 bases:
>100_bases TCTAACTTCGGAGCGCTCCCTTGGGGCGCTCCTTCCATGCCGGCGGTTTTCCCTGGAAAGCCGCCGTTTTCTTTTGAAGC CCAGCCATATCGTGAAGAAT
Product: glutamine synthetase
Products: NA
Alternate protein names: Glutamate--ammonia ligase I; Glutamine synthetase I; GSI [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTTANDILKQIKDNDIKFVDLRFTDPKGKLQHVTMDVVCVDEDMFADGVMFDGSSIAGWKAINESDMVLMPDPATAHIDP FFAQSTLVVLCDILDPVSGEAYNRDPRGTAKKAEAYLKASGIGDTVFVGPEPEFFVFDDVKYKADPYNTGFKLDSSELPS NDDTDYETGNLGHRPRVKGGYFPVPPIDSLQDMRSEMLTVLAEMGVVVEKHHHEVAAAQHELGVKFDTLVSSADKMQIYK YVVHQVANAYGKTATFMPKPIFGDNGSGMHVHQSIWKGGKPTFAGDEYAGLSENCLYYIGGIIKHAKAINAFTNPTTNSY KRLVPGYEAPVLLAYSARNRSASCRIPFGSNPKAKRVEVRFPDPTQNPYLGFAAMLMAGLDGIKNKIHPGKPMDKDLYDL PAKELKKIPTVCGSLREALESLDKDRKFLTAGGVFDDDQIDSFIELKMQEVMRFEMTPHPVEFDMYYSA
Sequences:
>Translated_469_residues MTTANDILKQIKDNDIKFVDLRFTDPKGKLQHVTMDVVCVDEDMFADGVMFDGSSIAGWKAINESDMVLMPDPATAHIDP FFAQSTLVVLCDILDPVSGEAYNRDPRGTAKKAEAYLKASGIGDTVFVGPEPEFFVFDDVKYKADPYNTGFKLDSSELPS NDDTDYETGNLGHRPRVKGGYFPVPPIDSLQDMRSEMLTVLAEMGVVVEKHHHEVAAAQHELGVKFDTLVSSADKMQIYK YVVHQVANAYGKTATFMPKPIFGDNGSGMHVHQSIWKGGKPTFAGDEYAGLSENCLYYIGGIIKHAKAINAFTNPTTNSY KRLVPGYEAPVLLAYSARNRSASCRIPFGSNPKAKRVEVRFPDPTQNPYLGFAAMLMAGLDGIKNKIHPGKPMDKDLYDL PAKELKKIPTVCGSLREALESLDKDRKFLTAGGVFDDDQIDSFIELKMQEVMRFEMTPHPVEFDMYYSA >Mature_468_residues TTANDILKQIKDNDIKFVDLRFTDPKGKLQHVTMDVVCVDEDMFADGVMFDGSSIAGWKAINESDMVLMPDPATAHIDPF FAQSTLVVLCDILDPVSGEAYNRDPRGTAKKAEAYLKASGIGDTVFVGPEPEFFVFDDVKYKADPYNTGFKLDSSELPSN DDTDYETGNLGHRPRVKGGYFPVPPIDSLQDMRSEMLTVLAEMGVVVEKHHHEVAAAQHELGVKFDTLVSSADKMQIYKY VVHQVANAYGKTATFMPKPIFGDNGSGMHVHQSIWKGGKPTFAGDEYAGLSENCLYYIGGIIKHAKAINAFTNPTTNSYK RLVPGYEAPVLLAYSARNRSASCRIPFGSNPKAKRVEVRFPDPTQNPYLGFAAMLMAGLDGIKNKIHPGKPMDKDLYDLP AKELKKIPTVCGSLREALESLDKDRKFLTAGGVFDDDQIDSFIELKMQEVMRFEMTPHPVEFDMYYSA
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=467, Percent_Identity=65.3104925053533, Blast_Score=646, Evalue=0.0, Organism=Escherichia coli, GI87081870, Length=394, Percent_Identity=25.6345177664975, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 51992; Mature: 51860
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP ; PS00182 GLNA_ADENYLATION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTANDILKQIKDNDIKFVDLRFTDPKGKLQHVTMDVVCVDEDMFADGVMFDGSSIAGWK CCCHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEECCCCCCCCE AINESDMVLMPDPATAHIDPFFAQSTLVVLCDILDPVSGEAYNRDPRGTAKKAEAYLKAS ECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC GIGDTVFVGPEPEFFVFDDVKYKADPYNTGFKLDSSELPSNDDTDYETGNLGHRPRVKGG CCCCEEEECCCCCEEEEECCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC YFPVPPIDSLQDMRSEMLTVLAEMGVVVEKHHHEVAAAQHELGVKFDTLVSSADKMQIYK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHH YVVHQVANAYGKTATFMPKPIFGDNGSGMHVHQSIWKGGKPTFAGDEYAGLSENCLYYIG HHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH GIIKHAKAINAFTNPTTNSYKRLVPGYEAPVLLAYSARNRSASCRIPFGSNPKAKRVEVR HHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEE FPDPTQNPYLGFAAMLMAGLDGIKNKIHPGKPMDKDLYDLPAKELKKIPTVCGSLREALE CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH SLDKDRKFLTAGGVFDDDQIDSFIELKMQEVMRFEMTPHPVEFDMYYSA HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC >Mature Secondary Structure TTANDILKQIKDNDIKFVDLRFTDPKGKLQHVTMDVVCVDEDMFADGVMFDGSSIAGWK CCHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEECCCCCCCCE AINESDMVLMPDPATAHIDPFFAQSTLVVLCDILDPVSGEAYNRDPRGTAKKAEAYLKAS ECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC GIGDTVFVGPEPEFFVFDDVKYKADPYNTGFKLDSSELPSNDDTDYETGNLGHRPRVKGG CCCCEEEECCCCCEEEEECCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC YFPVPPIDSLQDMRSEMLTVLAEMGVVVEKHHHEVAAAQHELGVKFDTLVSSADKMQIYK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHH YVVHQVANAYGKTATFMPKPIFGDNGSGMHVHQSIWKGGKPTFAGDEYAGLSENCLYYIG HHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH GIIKHAKAINAFTNPTTNSYKRLVPGYEAPVLLAYSARNRSASCRIPFGSNPKAKRVEVR HHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEE FPDPTQNPYLGFAAMLMAGLDGIKNKIHPGKPMDKDLYDLPAKELKKIPTVCGSLREALE CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH SLDKDRKFLTAGGVFDDDQIDSFIELKMQEVMRFEMTPHPVEFDMYYSA HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2882467 [H]