Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is dhs [H]

Identifier: 15888923

GI number: 15888923

Start: 1591996

End: 1593372

Strand: Reverse

Name: dhs [H]

Synonym: Atu1610

Alternate gene names: 15888923

Gene position: 1593372-1591996 (Counterclockwise)

Preceding gene: 159184837

Following gene: 15888916

Centisome position: 56.07

GC content: 61.44

Gene sequence:

>1377_bases
ATGGCACAGAATTGGACCCCCGGCAGCTGGCGGCAGAAACCGATCCAGCAGGTTCCCGAATATCCTGATGCGGCCGCACT
TGCGGCTACCGAAGCCACGCTTGCGACCTATCCGCCGCTGGTTTTTGCCGGTGAAGCCCGTCGCCTCAAAAAACAGCTCG
CCAATGTGGCGGAAGGCAACGCCTTCCTGCTGCAGGGTGGCGACTGCGCCGAAAGCTTCCTCGAGCATGGCGCCGACAAT
ATCCGCGACTTCTTCCGCGCTTTCCTGCAGATGGCCGTGGTGCTGACCTATGGCGCACAGCTGCCGGTGGTTAAGGTCGG
TCGCATTGCCGGCCAGTTCGCCAAGCCGCGCTCTTCCAACGTGGAAGTGCTCGATGGCGTGACGCTGCCGTCCTACCGCG
GTGACATCATCAACGGTATCGAATTCAACGAGGCCTCGCGCATTCCGAGCCCGGAGCGCCAGCTCGACGCCTATCGCCAG
TCGGCCGCGACGCTTAACCTGCTGCGCGCTTTCGCGATGGGCGGTTACGCCAACCTTGAAAACGTCCACCAGTGGATGCT
CGGTTTCATCAAGGACAGCCCGCAGGCGGACCGCTACCGCAAGCTGGCCGACCGCATTTCCGAAACCATGAACTTCATGC
AGGCGATCGGCATCAGCGCGGAAAACAATCCGAGCCTGCGCGAGACCGATTTCTTCACCAGCCATGAAGCGTTGCTGCTT
GGTTACGAAGAAGCGCTGACCCGTATCGATTCCACCTCGGGCGACTGGTACGCGACGTCGGGTCACATGATCTGGATCGG
TGACCGCACGCGTCAGCTCGACCATGCGCATGTGGAATATTTCCGCGGCATCAAGAATCCGATCGGCCTGAAGTGCGGTC
CGTCGCTGACGCCTGACAATCTGATCGAGCTGATCGATGCACTGAACCCGGCAAACGAAGCCGGGCGCCTGACGCTGATC
TGCCGTTTCGGCCATGACAAGGTGGCGGACAGCCTGCCGAAGCTCATCCGTGCGGTGGAGAAAGAAGGCCGTAAGGTTGT
CTGGTCCTGCGATCCGATGCATGGCAATACGATCACGCTCAACCACTACAAGACGCGTCCGTTCGAGCGCATCCTGTCGG
AAGTCGAAAGCTTCTTCCAGATCCATCGCGCCGAAGGCACGCATCCGGGCGGCATCCACATCGAGATGACCGGCAAGGAC
GTGACGGAATGCACGGGTGGCGCGCGCGCCGTGACGGCGGATTCGCTGTCCGACCGTTACCACACCCATTGCGATCCGCG
CCTCAACGCCGATCAGGCGCTGGAACTGGCGTTCCTGCTGTCCGAGCGTATGAAGAGCGGTCGCGACGAAAAGCGTCTGG
CAATCGCCAACGCCTGA

Upstream 100 bases:

>100_bases
CCCGACATCGGCTATGCAAAGCCGATGCTTGGAGCTATAAGCCGCTCAATTTTTCGAGGCGGTCGCGCGGCAGTCGCGCG
GGCGAAAAAAGGGTAAGAAC

Downstream 100 bases:

>100_bases
TATCAGGGCTGATCAAATGAAAAGCCGCCGGGATCTCTCCCGGCGGCTTTTTTATGGGCGGTGACGGGATTATTGCACCA
GTGCCGGCTGCTGGCAGCGA

Product: 2-dehydro-3-deoxyphosphoheptonate aldolase

Products: NA

Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MAQNWTPGSWRQKPIQQVPEYPDAAALAATEATLATYPPLVFAGEARRLKKQLANVAEGNAFLLQGGDCAESFLEHGADN
IRDFFRAFLQMAVVLTYGAQLPVVKVGRIAGQFAKPRSSNVEVLDGVTLPSYRGDIINGIEFNEASRIPSPERQLDAYRQ
SAATLNLLRAFAMGGYANLENVHQWMLGFIKDSPQADRYRKLADRISETMNFMQAIGISAENNPSLRETDFFTSHEALLL
GYEEALTRIDSTSGDWYATSGHMIWIGDRTRQLDHAHVEYFRGIKNPIGLKCGPSLTPDNLIELIDALNPANEAGRLTLI
CRFGHDKVADSLPKLIRAVEKEGRKVVWSCDPMHGNTITLNHYKTRPFERILSEVESFFQIHRAEGTHPGGIHIEMTGKD
VTECTGGARAVTADSLSDRYHTHCDPRLNADQALELAFLLSERMKSGRDEKRLAIANA

Sequences:

>Translated_458_residues
MAQNWTPGSWRQKPIQQVPEYPDAAALAATEATLATYPPLVFAGEARRLKKQLANVAEGNAFLLQGGDCAESFLEHGADN
IRDFFRAFLQMAVVLTYGAQLPVVKVGRIAGQFAKPRSSNVEVLDGVTLPSYRGDIINGIEFNEASRIPSPERQLDAYRQ
SAATLNLLRAFAMGGYANLENVHQWMLGFIKDSPQADRYRKLADRISETMNFMQAIGISAENNPSLRETDFFTSHEALLL
GYEEALTRIDSTSGDWYATSGHMIWIGDRTRQLDHAHVEYFRGIKNPIGLKCGPSLTPDNLIELIDALNPANEAGRLTLI
CRFGHDKVADSLPKLIRAVEKEGRKVVWSCDPMHGNTITLNHYKTRPFERILSEVESFFQIHRAEGTHPGGIHIEMTGKD
VTECTGGARAVTADSLSDRYHTHCDPRLNADQALELAFLLSERMKSGRDEKRLAIANA
>Mature_457_residues
AQNWTPGSWRQKPIQQVPEYPDAAALAATEATLATYPPLVFAGEARRLKKQLANVAEGNAFLLQGGDCAESFLEHGADNI
RDFFRAFLQMAVVLTYGAQLPVVKVGRIAGQFAKPRSSNVEVLDGVTLPSYRGDIINGIEFNEASRIPSPERQLDAYRQS
AATLNLLRAFAMGGYANLENVHQWMLGFIKDSPQADRYRKLADRISETMNFMQAIGISAENNPSLRETDFFTSHEALLLG
YEEALTRIDSTSGDWYATSGHMIWIGDRTRQLDHAHVEYFRGIKNPIGLKCGPSLTPDNLIELIDALNPANEAGRLTLIC
RFGHDKVADSLPKLIRAVEKEGRKVVWSCDPMHGNTITLNHYKTRPFERILSEVESFFQIHRAEGTHPGGIHIEMTGKDV
TECTGGARAVTADSLSDRYHTHCDPRLNADQALELAFLLSERMKSGRDEKRLAIANA

Specific function: Unknown

COG id: COG3200

COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II DAHP synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002480 [H]

Pfam domain/function: PF01474 DAHP_synth_2 [H]

EC number: =2.5.1.54 [H]

Molecular weight: Translated: 50882; Mature: 50751

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNWTPGSWRQKPIQQVPEYPDAAALAATEATLATYPPLVFAGEARRLKKQLANVAEGN
CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCC
AFLLQGGDCAESFLEHGADNIRDFFRAFLQMAVVLTYGAQLPVVKVGRIAGQFAKPRSSN
EEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
VEVLDGVTLPSYRGDIINGIEFNEASRIPSPERQLDAYRQSAATLNLLRAFAMGGYANLE
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
NVHQWMLGFIKDSPQADRYRKLADRISETMNFMQAIGISAENNPSLRETDFFTSHEALLL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEE
GYEEALTRIDSTSGDWYATSGHMIWIGDRTRQLDHAHVEYFRGIKNPIGLKCGPSLTPDN
EHHHHHHHHCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
LIELIDALNPANEAGRLTLICRFGHDKVADSLPKLIRAVEKEGRKVVWSCDPMHGNTITL
HHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEE
NHYKTRPFERILSEVESFFQIHRAEGTHPGGIHIEMTGKDVTECTGGARAVTADSLSDRY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCCCCEEEHHHHHHHH
HTHCDPRLNADQALELAFLLSERMKSGRDEKRLAIANA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCC
>Mature Secondary Structure 
AQNWTPGSWRQKPIQQVPEYPDAAALAATEATLATYPPLVFAGEARRLKKQLANVAEGN
CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCC
AFLLQGGDCAESFLEHGADNIRDFFRAFLQMAVVLTYGAQLPVVKVGRIAGQFAKPRSSN
EEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
VEVLDGVTLPSYRGDIINGIEFNEASRIPSPERQLDAYRQSAATLNLLRAFAMGGYANLE
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
NVHQWMLGFIKDSPQADRYRKLADRISETMNFMQAIGISAENNPSLRETDFFTSHEALLL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEE
GYEEALTRIDSTSGDWYATSGHMIWIGDRTRQLDHAHVEYFRGIKNPIGLKCGPSLTPDN
EHHHHHHHHCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
LIELIDALNPANEAGRLTLICRFGHDKVADSLPKLIRAVEKEGRKVVWSCDPMHGNTITL
HHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEE
NHYKTRPFERILSEVESFFQIHRAEGTHPGGIHIEMTGKDVTECTGGARAVTADSLSDRY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCCCCEEEHHHHHHHH
HTHCDPRLNADQALELAFLLSERMKSGRDEKRLAIANA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953; 8760910 [H]