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The map label for this gene is recJ [H]

Identifier: 15888900

GI number: 15888900

Start: 1567992

End: 1569800

Strand: Reverse

Name: recJ [H]

Synonym: Atu1586

Alternate gene names: 15888900

Gene position: 1569800-1567992 (Counterclockwise)

Preceding gene: 159184828

Following gene: 15888893

Centisome position: 55.24

GC content: 64.4

Gene sequence:

>1809_bases
ATGGCAATGTTGGAGCCGGCCGATACCGTGGCCCGCGCATTTCTAAGCGTGGAGCGGTCGGCGACAGAACAGCGCTGGGT
GTCGCGGTTGGATCAGGCCGGGCAGAACCGCGCGCTGGCCATGTCCCAGATACATGCCATTCCCGAATTGATTGCGCGGG
TGCTGGCGGGGCGCGGCGTCGGTGTCGATGACGCCCTGGCGTTCCTTGATCCGACCATTCGTTCCCTGATGCCTGATCCG
CATATGCTGACCGATTGCGAAAAGGCCGCCGAGCGGCTCGTGCGCGCCATCGAGACCGGCGAGAAGGTGGCGATCTTCGG
CGATTACGATGTCGACGGCGCTGCCTCTTCGGCGCTGACGTATCGCTTTCTCGCGCATTTCGGGTTGACGCCGGAGATCT
ATATTCCCGATCGCATTTTCGAGGGCTACGGGCCGAACCCGGCGGCGATGCAGCAGCTTGCCGCCAATGGGGCGACGCTG
ATCGTGACCGTGGACTGCGGCTCCACCAGCCATGAGTCGCTTCAGGCCGCGAAGGACGCCGGAACGGATGTGGTGGTGAT
CGATCACCATCAGGTCGGCACGGAACTGCCGCCGGCGGTGGCGCTGGTCAACCCTAACCGGGAGGACGATCTTTCGGGGC
AGGGGCATCTCTGTGCCGCCGGCGTGGTATTTCTTGTGATGGTGGCCACCTTGCGGCTGTTGAAGGACAGACGCAACCGG
CAGGCCTTCACGCTCGATCTGCTGTCGCTGCTTGATATCGTCGCGCTTGCGACGGTCTGCGATGTGGTGCCGCTGAAAGG
GCTGAACCGCGCTTATGTGGTGAAGGGCCTGATTGCCGCGCGGCATATGAACAATGCGGGACTTGCGGCGCTGTTCAAGA
AGGCGGGGCTGGGCGGGCCTGTTACCCCCTATCACTTCGGCTTCCTGATCGGGCCGCGCATCAATGCCGGCGGCCGCATT
GGCGATGCAGCCCTCGGCAGCCGTCTGCTGACGATCGACGATACGACGGAGGCGGAAGTCATTGCAGAGAAGCTGGACGA
GTTGAACCGCGAGCGGCAGGCCATGGAAGCGGCGATGCTGGCGGAGGCGGAAGCCGAGGCGCTGTATGAGTATGGCGACG
GCTCGGGTGCGGGTGTCATCGTCACGGCGCGTGAGAACTGGCATCCGGGCATCGTCGGCCTGCTTGCCTCGCGCTTGAAG
GACCGTTTCCGTCGTCCGGCTTTCGCCATTGCCTTTGATCCTTCCGGCAAGGGTACCGGTTCAGGCCGCTCGATCAACGG
CTTCGACATGGGCCGCATGGTGCGCGCCGCCGTGGAGACGGGATTGCTGGTCAAGGGCGGCGGGCACGCCATGGCGGCGG
GCCTGACGGTGGAGCGTGCCAATCTCGGCAAGCTCAGGACTTTCTTTGAAGAAGCGGCCGCAAAGACGGTGAATGAGCTG
GTGGAAAGCAGCGTGCTGAAGATCGATGGCGCCATCGGCGCTTCGGGCGCGACATTGCAGCTTGTCGATCAGCTGGAGCA
GGCCGGTCCCTATGGTTCGGGCCATTCGCAGCCGATCTTTGCCGTGCCGGCGCATCGCCTGCGCGATGTGCGGCTTGTGG
GCACAGCACACGTCAAGATCACGCTGGAGGCCATGGATGGCTCGCGGCTGGACGGTATCGCCTTTCGCGCTGCCGAAGCG
CCTCTGGGGCAGATGCTGTTGAATGCGCGCGGCAGGAACATCCACGTTGCAGGCACAGTGGGTGCCGATCTCTGGCAGGG
CCAGAGGCGCGTCCAACTGCGCGTGCTGGATGCGGCTTTCGCGCCCTGA

Upstream 100 bases:

>100_bases
TGACTCCATCAAGGCGCGTTTTTGCTTGAAAAACGCGCCTTTGCCATTTAGCCCGTTCTAACCAAGGCGCGAAACGCGCG
TGACAGGATGAAGGGACAGG

Downstream 100 bases:

>100_bases
CGGGGCTTCCAAACAGTTCTGAATTTTACTGAAACAATGCTGGATGGGCACATCAAATGTGCTCCGGCGTCTTTACGCGA
TGCGTGAAGATCTCGATGCA

Product: single-stranded-DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 601

Protein sequence:

>602_residues
MAMLEPADTVARAFLSVERSATEQRWVSRLDQAGQNRALAMSQIHAIPELIARVLAGRGVGVDDALAFLDPTIRSLMPDP
HMLTDCEKAAERLVRAIETGEKVAIFGDYDVDGAASSALTYRFLAHFGLTPEIYIPDRIFEGYGPNPAAMQQLAANGATL
IVTVDCGSTSHESLQAAKDAGTDVVVIDHHQVGTELPPAVALVNPNREDDLSGQGHLCAAGVVFLVMVATLRLLKDRRNR
QAFTLDLLSLLDIVALATVCDVVPLKGLNRAYVVKGLIAARHMNNAGLAALFKKAGLGGPVTPYHFGFLIGPRINAGGRI
GDAALGSRLLTIDDTTEAEVIAEKLDELNRERQAMEAAMLAEAEAEALYEYGDGSGAGVIVTARENWHPGIVGLLASRLK
DRFRRPAFAIAFDPSGKGTGSGRSINGFDMGRMVRAAVETGLLVKGGGHAMAAGLTVERANLGKLRTFFEEAAAKTVNEL
VESSVLKIDGAIGASGATLQLVDQLEQAGPYGSGHSQPIFAVPAHRLRDVRLVGTAHVKITLEAMDGSRLDGIAFRAAEA
PLGQMLLNARGRNIHVAGTVGADLWQGQRRVQLRVLDAAFAP

Sequences:

>Translated_602_residues
MAMLEPADTVARAFLSVERSATEQRWVSRLDQAGQNRALAMSQIHAIPELIARVLAGRGVGVDDALAFLDPTIRSLMPDP
HMLTDCEKAAERLVRAIETGEKVAIFGDYDVDGAASSALTYRFLAHFGLTPEIYIPDRIFEGYGPNPAAMQQLAANGATL
IVTVDCGSTSHESLQAAKDAGTDVVVIDHHQVGTELPPAVALVNPNREDDLSGQGHLCAAGVVFLVMVATLRLLKDRRNR
QAFTLDLLSLLDIVALATVCDVVPLKGLNRAYVVKGLIAARHMNNAGLAALFKKAGLGGPVTPYHFGFLIGPRINAGGRI
GDAALGSRLLTIDDTTEAEVIAEKLDELNRERQAMEAAMLAEAEAEALYEYGDGSGAGVIVTARENWHPGIVGLLASRLK
DRFRRPAFAIAFDPSGKGTGSGRSINGFDMGRMVRAAVETGLLVKGGGHAMAAGLTVERANLGKLRTFFEEAAAKTVNEL
VESSVLKIDGAIGASGATLQLVDQLEQAGPYGSGHSQPIFAVPAHRLRDVRLVGTAHVKITLEAMDGSRLDGIAFRAAEA
PLGQMLLNARGRNIHVAGTVGADLWQGQRRVQLRVLDAAFAP
>Mature_601_residues
AMLEPADTVARAFLSVERSATEQRWVSRLDQAGQNRALAMSQIHAIPELIARVLAGRGVGVDDALAFLDPTIRSLMPDPH
MLTDCEKAAERLVRAIETGEKVAIFGDYDVDGAASSALTYRFLAHFGLTPEIYIPDRIFEGYGPNPAAMQQLAANGATLI
VTVDCGSTSHESLQAAKDAGTDVVVIDHHQVGTELPPAVALVNPNREDDLSGQGHLCAAGVVFLVMVATLRLLKDRRNRQ
AFTLDLLSLLDIVALATVCDVVPLKGLNRAYVVKGLIAARHMNNAGLAALFKKAGLGGPVTPYHFGFLIGPRINAGGRIG
DAALGSRLLTIDDTTEAEVIAEKLDELNRERQAMEAAMLAEAEAEALYEYGDGSGAGVIVTARENWHPGIVGLLASRLKD
RFRRPAFAIAFDPSGKGTGSGRSINGFDMGRMVRAAVETGLLVKGGGHAMAAGLTVERANLGKLRTFFEEAAAKTVNELV
ESSVLKIDGAIGASGATLQLVDQLEQAGPYGSGHSQPIFAVPAHRLRDVRLVGTAHVKITLEAMDGSRLDGIAFRAAEAP
LGQMLLNARGRNIHVAGTVGADLWQGQRRVQLRVLDAAFAP

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=569, Percent_Identity=36.5553602811951, Blast_Score=290, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63909; Mature: 63778

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLEPADTVARAFLSVERSATEQRWVSRLDQAGQNRALAMSQIHAIPELIARVLAGRGV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
GVDDALAFLDPTIRSLMPDPHMLTDCEKAAERLVRAIETGEKVAIFGDYDVDGAASSALT
CHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
YRFLAHFGLTPEIYIPDRIFEGYGPNPAAMQQLAANGATLIVTVDCGSTSHESLQAAKDA
HHHHHHHCCCCEEEECHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHC
GTDVVVIDHHQVGTELPPAVALVNPNREDDLSGQGHLCAAGVVFLVMVATLRLLKDRRNR
CCEEEEEECHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
QAFTLDLLSLLDIVALATVCDVVPLKGLNRAYVVKGLIAARHMNNAGLAALFKKAGLGGP
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
VTPYHFGFLIGPRINAGGRIGDAALGSRLLTIDDTTEAEVIAEKLDELNRERQAMEAAML
CCCHHEEEEECCEECCCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEAEAEALYEYGDGSGAGVIVTARENWHPGIVGLLASRLKDRFRRPAFAIAFDPSGKGTG
HHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
SGRSINGFDMGRMVRAAVETGLLVKGGGHAMAAGLTVERANLGKLRTFFEEAAAKTVNEL
CCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEECEEEECCCHHHHHHHHHHHHHHHHHHH
VESSVLKIDGAIGASGATLQLVDQLEQAGPYGSGHSQPIFAVPAHRLRDVRLVGTAHVKI
HHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCHHHHCEEEEEEEEEEEE
TLEAMDGSRLDGIAFRAAEAPLGQMLLNARGRNIHVAGTVGADLWQGQRRVQLRVLDAAF
EEEECCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEEECCHHHHCCCCEEEEEEECCCC
AP
CC
>Mature Secondary Structure 
AMLEPADTVARAFLSVERSATEQRWVSRLDQAGQNRALAMSQIHAIPELIARVLAGRGV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
GVDDALAFLDPTIRSLMPDPHMLTDCEKAAERLVRAIETGEKVAIFGDYDVDGAASSALT
CHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
YRFLAHFGLTPEIYIPDRIFEGYGPNPAAMQQLAANGATLIVTVDCGSTSHESLQAAKDA
HHHHHHHCCCCEEEECHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHC
GTDVVVIDHHQVGTELPPAVALVNPNREDDLSGQGHLCAAGVVFLVMVATLRLLKDRRNR
CCEEEEEECHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
QAFTLDLLSLLDIVALATVCDVVPLKGLNRAYVVKGLIAARHMNNAGLAALFKKAGLGGP
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
VTPYHFGFLIGPRINAGGRIGDAALGSRLLTIDDTTEAEVIAEKLDELNRERQAMEAAML
CCCHHEEEEECCEECCCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEAEAEALYEYGDGSGAGVIVTARENWHPGIVGLLASRLKDRFRRPAFAIAFDPSGKGTG
HHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
SGRSINGFDMGRMVRAAVETGLLVKGGGHAMAAGLTVERANLGKLRTFFEEAAAKTVNEL
CCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEECEEEECCCHHHHHHHHHHHHHHHHHHH
VESSVLKIDGAIGASGATLQLVDQLEQAGPYGSGHSQPIFAVPAHRLRDVRLVGTAHVKI
HHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCHHHHCEEEEEEEEEEEE
TLEAMDGSRLDGIAFRAAEAPLGQMLLNARGRNIHVAGTVGADLWQGQRRVQLRVLDAAF
EEEECCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEEECCHHHHCCCCEEEEEEECCCC
AP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]