Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888870

Identifier: 15888870

GI number: 15888870

Start: 1540748

End: 1541074

Strand: Direct

Name: 15888870

Synonym: Atu1549

Alternate gene names: NA

Gene position: 1540748-1541074 (Clockwise)

Preceding gene: 15888869

Following gene: 15888871

Centisome position: 54.22

GC content: 62.69

Gene sequence:

>327_bases
ATGCCAGATGAGCCGGATGCCCGCTTGACAGATGAGGAACGATCCGCAGCCGCTTTTTTGGCGGCCGTGGAAAAACTCCA
GCAATCGTCTCCAGCGCTGACGGTGACGGGAGCAGCAATCCTGGTTGCGATCCATCAGGACATCGCCACCGATAGCCGCA
GCATTGCCAACCGGCTGGGGCTTGCACATGCCCTCGTTCTGCGCGAAATCACGAGCCTGTCGCCCAGCTTCCTGCGGGTG
ACGAAACGCGACGCCCGTACCCAGCGCAGCTTTCTGGAGGCGACCGGGGAAGGACAGGCGCTCGCCGCCTCATCCTCGCG
GATTTGA

Upstream 100 bases:

>100_bases
TATCCGGAGCTGAACGTGCTGGTGCCGCTGTCGAGCTACGGCGAAGGCAGCTTCACGCCGACATCGAAATCGGTGCTGGT
TTCCGTCCGCCTGCTCGCCG

Downstream 100 bases:

>100_bases
AACGAAGGAGCATTCCTTGGCAATCAGGCCGATCCTGCCCTACCCCCATGCCGGTCTTTCCGGGATCTGCGCGCCAGTTA
CGGTTTTTGACGATCATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MPDEPDARLTDEERSAAAFLAAVEKLQQSSPALTVTGAAILVAIHQDIATDSRSIANRLGLAHALVLREITSLSPSFLRV
TKRDARTQRSFLEATGEGQALAASSSRI

Sequences:

>Translated_108_residues
MPDEPDARLTDEERSAAAFLAAVEKLQQSSPALTVTGAAILVAIHQDIATDSRSIANRLGLAHALVLREITSLSPSFLRV
TKRDARTQRSFLEATGEGQALAASSSRI
>Mature_107_residues
PDEPDARLTDEERSAAAFLAAVEKLQQSSPALTVTGAAILVAIHQDIATDSRSIANRLGLAHALVLREITSLSPSFLRVT
KRDARTQRSFLEATGEGQALAASSSRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11499; Mature: 11368

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDEPDARLTDEERSAAAFLAAVEKLQQSSPALTVTGAAILVAIHQDIATDSRSIANRLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHH
LAHALVLREITSLSPSFLRVTKRDARTQRSFLEATGEGQALAASSSRI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure 
PDEPDARLTDEERSAAAFLAAVEKLQQSSPALTVTGAAILVAIHQDIATDSRSIANRLG
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHH
LAHALVLREITSLSPSFLRVTKRDARTQRSFLEATGEGQALAASSSRI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA