Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is fghA [H]
Identifier: 15888800
GI number: 15888800
Start: 1469404
End: 1470237
Strand: Reverse
Name: fghA [H]
Synonym: Atu1476
Alternate gene names: 15888800
Gene position: 1470237-1469404 (Counterclockwise)
Preceding gene: 15888801
Following gene: 15888793
Centisome position: 51.74
GC content: 58.03
Gene sequence:
>834_bases ATGAACATCATTTCGCAGAATACGGCCTTTGGCGGCATGCAGGGCGTTTTTTCGCACCAATCCGAAACGCTCAAAAGCGA GATGACCTTCGCAGTCTATGTGCCGCCGAAGGCGATCCATGAGCCCTGCCCGGTTGTCTGGTATCTCTCCGGCCTCACCT GCACCCATGCCAATGTCATGGAAAAGGGCGAATATCGCCGCATGGCGTCTGAACTGGGTTTGGTCGTCGTCTGCCCGGAT ACCAGCCCACGCGGCAATGACGTGCCGGATGAGCTGACCAACTGGCAGATGGGCAAGGGCGCCGGTTTTTATCTCGACGC CACCGAGGAGCCCTGGTCGGAGCATTACCAGATGTACAGCTATGTGACGGAAGAGCTGCCTGCCCTCATCGGCCAGCATT TTCGCGCCGATATGAGCCGCCAGTCCATTTTCGGCCATTCGATGGGCGGTCATGGTGCTATGACGATTGCGCTGAAAAAC CCCGAGCGTTTCAAGAGCTGCTCGGCTTTTGCACCCATCGTTGCCCCCTCTTCGGCCGACTGGTCGGAACCGGCGCTGGA GAAATATCTCGGTGCTGACAGGGCCGCATGGCGTCGCTATGACGCCTGCTCGCTGGTCGAGGATGGCGCACGGTTTCCCG AGTTCCTGATCGACCAGGGCAAGGCCGATAGTTTCCTGGAAAAAGGCCTGCGCCCCTGGCTGTTCGAAGAGGCGATCAAG GGCACAGATATCGGCCTGACGCTGCGCATGCATGATCGTTACGACCACTCCTATTATTTCATCTCCACTTTCATGGATGA CCATCTGAAGTGGCATGCGGAGCGGCTTGGCTAA
Upstream 100 bases:
>100_bases ATCGTTTCTTTTTTCTTCAACACGGTTCTGGTCGCGGCGGCGGTCAATGCCGCGGTCTCGCTTGCGGGCTGAACCGAAAT TTTCTTAAGGGAATGGCTTC
Downstream 100 bases:
>100_bases GGCTGGAGAAACAGGCCGGCGGCGCCCTGTGAGCGCCGCCGTTTCCGTCTTGATCCGGCGTCACGGGATGCGGGCAATGA CCTTTATCTCGAAATCGAAG
Product: esterase D
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MNIISQNTAFGGMQGVFSHQSETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPD TSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKN PERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIK GTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAERLG
Sequences:
>Translated_277_residues MNIISQNTAFGGMQGVFSHQSETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPD TSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKN PERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIK GTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAERLG >Mature_277_residues MNIISQNTAFGGMQGVFSHQSETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPD TSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKN PERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIK GTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAERLG
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate (Probable) [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=276, Percent_Identity=53.2608695652174, Blast_Score=292, Evalue=2e-79, Organism=Escherichia coli, GI1786551, Length=277, Percent_Identity=45.8483754512635, Blast_Score=276, Evalue=1e-75, Organism=Escherichia coli, GI1788477, Length=278, Percent_Identity=46.4028776978417, Blast_Score=247, Evalue=6e-67, Organism=Caenorhabditis elegans, GI17510185, Length=281, Percent_Identity=46.6192170818505, Blast_Score=253, Evalue=5e-68, Organism=Saccharomyces cerevisiae, GI6322393, Length=298, Percent_Identity=41.2751677852349, Blast_Score=226, Evalue=3e-60, Organism=Drosophila melanogaster, GI45551932, Length=277, Percent_Identity=46.5703971119134, Blast_Score=257, Evalue=6e-69, Organism=Drosophila melanogaster, GI24648347, Length=277, Percent_Identity=46.5703971119134, Blast_Score=256, Evalue=9e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31269; Mature: 31269
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIISQNTAFGGMQGVFSHQSETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVM CCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEECHHHHCCCCCEEEEECCCEECHHHHH EKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYS HHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCHHHHHHHHH YVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSAD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCEECCCCCC WSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIK CCCHHHHHHHCCCHHHHHHCCHHHHHHCCCCCCHHHHCCCCCHHHHHHCCCHHHHHHHHC GTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAERLG CCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIISQNTAFGGMQGVFSHQSETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVM CCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEECHHHHCCCCCEEEEECCCEECHHHHH EKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYS HHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCHHHHHHHHH YVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSAD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCEECCCCCC WSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIK CCCHHHHHHHCCCHHHHHHCCHHHHHHCCCCCCHHHHCCCCCHHHHHHCCCHHHHHHHHC GTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAERLG CCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892832 [H]