Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is cysI [H]
Identifier: 15888782
GI number: 15888782
Start: 1451652
End: 1453322
Strand: Direct
Name: cysI [H]
Synonym: Atu1456
Alternate gene names: 15888782
Gene position: 1451652-1453322 (Clockwise)
Preceding gene: 15888781
Following gene: 159184767
Centisome position: 51.09
GC content: 60.2
Gene sequence:
>1671_bases ATGTACCGTTACGACGAATTCGATCACGCATTTGTTGAAGGCCGCGTGGCGCAGTTTCGCGATCAGGTCGAGCGCCGGTT ATCGGGCGAGTTGGCCGAGGACGCATTCAAGCCGCTGCGCCTGATGAATGGTGTCTATCTTCAGCTCCACGCCTACATGC TGCGCGTCGCCATTCCCTACGGTACGCTGAATTCGCAACAGATGCGGATGCTTGCCCATATCGCCCGCAAATATGACCGG GGTTATGGCCATTTCACCACCCGCCAGAACATCCAGTACAACTGGCCGCGCCTCTCGGACACGCCGGATATCCTCTCTGA ACTGGCAAGCGTGGAAATGCACGCACTGCAGACGTCGGGTAACTGCATTCGCAACGTGACCGCCGATCATTTCGCGGGTG CTGCCGCAGACGAAGTCGCCGATCCGCGTCCCTATGCGGAAATCCTGCGTCAATGGTCTTCCGTGCATCCGGAATTCTCG TTCCTGCCGCGCAAGTTCAAGATCGCGGTGACGGGTGCCGAGCGCGACCGCGCCGCCATTCAGGTCCACGATATCGGCCT GCATCTGAAAAAGAACGACAAGGGTGAGATCGGTTTTGCCGTTTACGTCGGCGGCGGGCAGGGCCGTACGCCGATGATCG CCAAGAAGATTCGCGACTTCCTGCCGGAAGAGGACCTGCTGTCCTATACCACGGCCGTCATGCGCGTTTATAACCTGCAC GGCCGCCGCGACAACAAATACAAGGCGCGCATCAAGATTCTCGTACATGAAACCGGCGCAGAAGAACTGGCCCGCCAGGT CGAGGTTGAATTCGCGGAGCTGAAAAACACCGAATTGAAGCTGCCGGATGCCGATATTGCCGCCATCACCGCCTATTTCG CCCCGCCGGCGCTGAAAGACCGCCCTGAAGGCTGGGAAAGCCTGGCGCGCTGGAAGCGTGCGGATGAAGGTTTTGCCCGT TTTGTCGAGCAGAACGTCGCGCCGCACAAGCACCCGGACTACGGCATGGTGACGATTTCGCTGAAGCCGATCGGCGGCAT TCCGGGCGACGCGACCGACGAGCAGATGGAACTCGTCGCCGACATCGCCGCCGAATATGCCTTTGACGAAATCCGCATCA GTCACGAGCAGAACATCATCCTGCCGCATGTGGCGCTGGCCGATCTCGAGCCGGTCTATCGTGCGCTCGTGGGCGCGGGA CTGGCGACTGCCAATGCCGGGCTGATCACCGATATCATTGCCTGTCCCGGGCTGGACTATTGCGCGCTTGCCAATGCCCG CTCCATTCCGGTGGCGCAGGAGATCTCCACCCGTTTCGGCGCGCCCGAACGTCAGGCCGAGATCGGCGAGCTGAAGATCA AGATTTCCGGCTGCATCAACGCCTGCGGCCACCACCATGTCGGCCATATCGGCCTTCTGGGCGTGGAGAAGAAGGGTGCC GAACTCTACCAGATCACGCTTGGCGGATCGGGTGATGAAAACACCTCGATTGGTGAAATCATTGGCCGCGGTTTCGAGCC GGAAAAAGTGACCGACGCGGTGGAAACCATTGTCGACACTTATCTGGGCTTGCGCCTTTCGAAGGAAGAAACCTTCCTCG AAGCCTATCGCCGCGTCGGACCGCAGCCGTTCAAGGACGCGCTCTACGGTTCCGCCGCCGAAGCCGCCTGA
Upstream 100 bases:
>100_bases CGCGGCTTCGCGAGCGCATCCGCGCCGCCGGCCCCACCATGCACTATGCCACCGGCTACAAGCCGGCCGATGCAGCATTT ATCGCAGTCTGAGGAAGAAT
Downstream 100 bases:
>100_bases GGAAATGGATATGACGAAAATCTGGACCCGCGACGGCTTTGCGGAAAACGATCCATGGGTGATCGAAACGGAAGAGGTGA AGGCAACGGGCGAGCAGAAG
Product: sulfite reductase (NADPH) hemoprotein beta-component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MYRYDEFDHAFVEGRVAQFRDQVERRLSGELAEDAFKPLRLMNGVYLQLHAYMLRVAIPYGTLNSQQMRMLAHIARKYDR GYGHFTTRQNIQYNWPRLSDTPDILSELASVEMHALQTSGNCIRNVTADHFAGAAADEVADPRPYAEILRQWSSVHPEFS FLPRKFKIAVTGAERDRAAIQVHDIGLHLKKNDKGEIGFAVYVGGGQGRTPMIAKKIRDFLPEEDLLSYTTAVMRVYNLH GRRDNKYKARIKILVHETGAEELARQVEVEFAELKNTELKLPDADIAAITAYFAPPALKDRPEGWESLARWKRADEGFAR FVEQNVAPHKHPDYGMVTISLKPIGGIPGDATDEQMELVADIAAEYAFDEIRISHEQNIILPHVALADLEPVYRALVGAG LATANAGLITDIIACPGLDYCALANARSIPVAQEISTRFGAPERQAEIGELKIKISGCINACGHHHVGHIGLLGVEKKGA ELYQITLGGSGDENTSIGEIIGRGFEPEKVTDAVETIVDTYLGLRLSKEETFLEAYRRVGPQPFKDALYGSAAEAA
Sequences:
>Translated_556_residues MYRYDEFDHAFVEGRVAQFRDQVERRLSGELAEDAFKPLRLMNGVYLQLHAYMLRVAIPYGTLNSQQMRMLAHIARKYDR GYGHFTTRQNIQYNWPRLSDTPDILSELASVEMHALQTSGNCIRNVTADHFAGAAADEVADPRPYAEILRQWSSVHPEFS FLPRKFKIAVTGAERDRAAIQVHDIGLHLKKNDKGEIGFAVYVGGGQGRTPMIAKKIRDFLPEEDLLSYTTAVMRVYNLH GRRDNKYKARIKILVHETGAEELARQVEVEFAELKNTELKLPDADIAAITAYFAPPALKDRPEGWESLARWKRADEGFAR FVEQNVAPHKHPDYGMVTISLKPIGGIPGDATDEQMELVADIAAEYAFDEIRISHEQNIILPHVALADLEPVYRALVGAG LATANAGLITDIIACPGLDYCALANARSIPVAQEISTRFGAPERQAEIGELKIKISGCINACGHHHVGHIGLLGVEKKGA ELYQITLGGSGDENTSIGEIIGRGFEPEKVTDAVETIVDTYLGLRLSKEETFLEAYRRVGPQPFKDALYGSAAEAA >Mature_556_residues MYRYDEFDHAFVEGRVAQFRDQVERRLSGELAEDAFKPLRLMNGVYLQLHAYMLRVAIPYGTLNSQQMRMLAHIARKYDR GYGHFTTRQNIQYNWPRLSDTPDILSELASVEMHALQTSGNCIRNVTADHFAGAAADEVADPRPYAEILRQWSSVHPEFS FLPRKFKIAVTGAERDRAAIQVHDIGLHLKKNDKGEIGFAVYVGGGQGRTPMIAKKIRDFLPEEDLLSYTTAVMRVYNLH GRRDNKYKARIKILVHETGAEELARQVEVEFAELKNTELKLPDADIAAITAYFAPPALKDRPEGWESLARWKRADEGFAR FVEQNVAPHKHPDYGMVTISLKPIGGIPGDATDEQMELVADIAAEYAFDEIRISHEQNIILPHVALADLEPVYRALVGAG LATANAGLITDIIACPGLDYCALANARSIPVAQEISTRFGAPERQAEIGELKIKISGCINACGHHHVGHIGLLGVEKKGA ELYQITLGGSGDENTSIGEIIGRGFEPEKVTDAVETIVDTYLGLRLSKEETFLEAYRRVGPQPFKDALYGSAAEAA
Specific function: This Enzyme Catalyzes The 6-Electron Reduction Of Sulfite To Sulfide. This Is One Of Several Activities Required For The Biosynthesis Of L-Cysteine From Sulfate. [C]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
None
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 [H]
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: =1.8.7.1 [H]
Molecular weight: Translated: 61721; Mature: 61721
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRYDEFDHAFVEGRVAQFRDQVERRLSGELAEDAFKPLRLMNGVYLQLHAYMLRVAIPY CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC GTLNSQQMRMLAHIARKYDRGYGHFTTRQNIQYNWPRLSDTPDILSELASVEMHALQTSG CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCC NCIRNVTADHFAGAAADEVADPRPYAEILRQWSSVHPEFSFLPRKFKIAVTGAERDRAAI CHHHCCCHHHHCCCCHHHCCCCCHHHHHHHHHHHCCCCHHCCCCEEEEEEECCCCCCCEE QVHDIGLHLKKNDKGEIGFAVYVGGGQGRTPMIAKKIRDFLPEEDLLSYTTAVMRVYNLH EEEEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GRRDNKYKARIKILVHETGAEELARQVEVEFAELKNTELKLPDADIAAITAYFAPPALKD CCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCC RPEGWESLARWKRADEGFARFVEQNVAPHKHPDYGMVTISLKPIGGIPGDATDEQMELVA CCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH DIAAEYAFDEIRISHEQNIILPHVALADLEPVYRALVGAGLATANAGLITDIIACPGLDY HHHHHHHHHHHEECCCCCEEECHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCH CALANARSIPVAQEISTRFGAPERQAEIGELKIKISGCINACGHHHVGHIGLLGVEKKGA HHHCCCCCCCHHHHHHHHCCCCHHCCCCCEEEEEEEHHHHHCCCCCCCCEEEEEECCCCC ELYQITLGGSGDENTSIGEIIGRGFEPEKVTDAVETIVDTYLGLRLSKEETFLEAYRRVG EEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHCC PQPFKDALYGSAAEAA CCCHHHHHCCCCCCCC >Mature Secondary Structure MYRYDEFDHAFVEGRVAQFRDQVERRLSGELAEDAFKPLRLMNGVYLQLHAYMLRVAIPY CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC GTLNSQQMRMLAHIARKYDRGYGHFTTRQNIQYNWPRLSDTPDILSELASVEMHALQTSG CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCC NCIRNVTADHFAGAAADEVADPRPYAEILRQWSSVHPEFSFLPRKFKIAVTGAERDRAAI CHHHCCCHHHHCCCCHHHCCCCCHHHHHHHHHHHCCCCHHCCCCEEEEEEECCCCCCCEE QVHDIGLHLKKNDKGEIGFAVYVGGGQGRTPMIAKKIRDFLPEEDLLSYTTAVMRVYNLH EEEEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GRRDNKYKARIKILVHETGAEELARQVEVEFAELKNTELKLPDADIAAITAYFAPPALKD CCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCC RPEGWESLARWKRADEGFARFVEQNVAPHKHPDYGMVTISLKPIGGIPGDATDEQMELVA CCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH DIAAEYAFDEIRISHEQNIILPHVALADLEPVYRALVGAGLATANAGLITDIIACPGLDY HHHHHHHHHHHEECCCCCEEECHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCH CALANARSIPVAQEISTRFGAPERQAEIGELKIKISGCINACGHHHVGHIGLLGVEKKGA HHHCCCCCCCHHHHHHHHCCCCHHCCCCCEEEEEEEHHHHHCCCCCCCCEEEEEECCCCC ELYQITLGGSGDENTSIGEIIGRGFEPEKVTDAVETIVDTYLGLRLSKEETFLEAYRRVG EEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHCC PQPFKDALYGSAAEAA CCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA