Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159184767

Identifier: 159184767

GI number: 159184767

Start: 1453333

End: 1453839

Strand: Direct

Name: 159184767

Synonym: Atu1457

Alternate gene names: NA

Gene position: 1453333-1453839 (Clockwise)

Preceding gene: 15888782

Following gene: 15888784

Centisome position: 51.15

GC content: 60.55

Gene sequence:

>507_bases
ATGACGAAAATCTGGACCCGCGACGGCTTTGCGGAAAACGATCCATGGGTGATCGAAACGGAAGAGGTGAAGGCAACGGG
CGAGCAGAAGCCCGTGCTTCCACTTGCCGATTTCCTTGTCCGCGCCGCCGAAAGCAACGATATTGGCCTCGGCGTGCTGA
TTTCGCCGGCTGACGACGTTAACAGGCTCGAGCCTTATCTCGACCGTATCGACCTTGTCGCCGTAAGCTTTCCGGCCTTC
AATGACGGGCGTGGTTTCAGCCACGCTTCGCTCTTGCGCAGCCGCCTTGGTTTTGCGGGCGAGGTGAGGGCGGTCGGCGA
TGTTTTGATCGATCAGGTGCCGCTGATGCTGCGCACCGGTTTTACCAGCTTTGCCGTGACGAACGAGACGGCAATCCGCC
GCCTTTCCGAAAATCGCCTGCCGGAAATCACGGTCTACTACCAGCCGACCGCCCTTCCCGCCACCGGTGGTGAGGCCTAT
AGCTGGCGTCGCCGTGCGGCCCAATGA

Upstream 100 bases:

>100_bases
AAGGAAGAAACCTTCCTCGAAGCCTATCGCCGCGTCGGACCGCAGCCGTTCAAGGACGCGCTCTACGGTTCCGCCGCCGA
AGCCGCCTGAGGAAATGGAT

Downstream 100 bases:

>100_bases
CGCGTTGTGCGGAAATATGAGTTTTGGATGCATATTTTCTGCGCGCATGGCAGTATTGATATTCTCATGCCTTCAAACCG
CGACAAAAATGGTATAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTKIWTRDGFAENDPWVIETEEVKATGEQKPVLPLADFLVRAAESNDIGLGVLISPADDVNRLEPYLDRIDLVAVSFPAF
NDGRGFSHASLLRSRLGFAGEVRAVGDVLIDQVPLMLRTGFTSFAVTNETAIRRLSENRLPEITVYYQPTALPATGGEAY
SWRRRAAQ

Sequences:

>Translated_168_residues
MTKIWTRDGFAENDPWVIETEEVKATGEQKPVLPLADFLVRAAESNDIGLGVLISPADDVNRLEPYLDRIDLVAVSFPAF
NDGRGFSHASLLRSRLGFAGEVRAVGDVLIDQVPLMLRTGFTSFAVTNETAIRRLSENRLPEITVYYQPTALPATGGEAY
SWRRRAAQ
>Mature_167_residues
TKIWTRDGFAENDPWVIETEEVKATGEQKPVLPLADFLVRAAESNDIGLGVLISPADDVNRLEPYLDRIDLVAVSFPAFN
DGRGFSHASLLRSRLGFAGEVRAVGDVLIDQVPLMLRTGFTSFAVTNETAIRRLSENRLPEITVYYQPTALPATGGEAYS
WRRRAAQ

Specific function: Unknown

COG id: COG3749

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18594; Mature: 18463

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIWTRDGFAENDPWVIETEEVKATGEQKPVLPLADFLVRAAESNDIGLGVLISPADDV
CCEECCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHH
NRLEPYLDRIDLVAVSFPAFNDGRGFSHASLLRSRLGFAGEVRAVGDVLIDQVPLMLRTG
HHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
FTSFAVTNETAIRRLSENRLPEITVYYQPTALPATGGEAYSWRRRAAQ
CCCEEEECHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
TKIWTRDGFAENDPWVIETEEVKATGEQKPVLPLADFLVRAAESNDIGLGVLISPADDV
CEECCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHH
NRLEPYLDRIDLVAVSFPAFNDGRGFSHASLLRSRLGFAGEVRAVGDVLIDQVPLMLRTG
HHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
FTSFAVTNETAIRRLSENRLPEITVYYQPTALPATGGEAYSWRRRAAQ
CCCEEEECHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA