Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184767
Identifier: 159184767
GI number: 159184767
Start: 1453333
End: 1453839
Strand: Direct
Name: 159184767
Synonym: Atu1457
Alternate gene names: NA
Gene position: 1453333-1453839 (Clockwise)
Preceding gene: 15888782
Following gene: 15888784
Centisome position: 51.15
GC content: 60.55
Gene sequence:
>507_bases ATGACGAAAATCTGGACCCGCGACGGCTTTGCGGAAAACGATCCATGGGTGATCGAAACGGAAGAGGTGAAGGCAACGGG CGAGCAGAAGCCCGTGCTTCCACTTGCCGATTTCCTTGTCCGCGCCGCCGAAAGCAACGATATTGGCCTCGGCGTGCTGA TTTCGCCGGCTGACGACGTTAACAGGCTCGAGCCTTATCTCGACCGTATCGACCTTGTCGCCGTAAGCTTTCCGGCCTTC AATGACGGGCGTGGTTTCAGCCACGCTTCGCTCTTGCGCAGCCGCCTTGGTTTTGCGGGCGAGGTGAGGGCGGTCGGCGA TGTTTTGATCGATCAGGTGCCGCTGATGCTGCGCACCGGTTTTACCAGCTTTGCCGTGACGAACGAGACGGCAATCCGCC GCCTTTCCGAAAATCGCCTGCCGGAAATCACGGTCTACTACCAGCCGACCGCCCTTCCCGCCACCGGTGGTGAGGCCTAT AGCTGGCGTCGCCGTGCGGCCCAATGA
Upstream 100 bases:
>100_bases AAGGAAGAAACCTTCCTCGAAGCCTATCGCCGCGTCGGACCGCAGCCGTTCAAGGACGCGCTCTACGGTTCCGCCGCCGA AGCCGCCTGAGGAAATGGAT
Downstream 100 bases:
>100_bases CGCGTTGTGCGGAAATATGAGTTTTGGATGCATATTTTCTGCGCGCATGGCAGTATTGATATTCTCATGCCTTCAAACCG CGACAAAAATGGTATAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTKIWTRDGFAENDPWVIETEEVKATGEQKPVLPLADFLVRAAESNDIGLGVLISPADDVNRLEPYLDRIDLVAVSFPAF NDGRGFSHASLLRSRLGFAGEVRAVGDVLIDQVPLMLRTGFTSFAVTNETAIRRLSENRLPEITVYYQPTALPATGGEAY SWRRRAAQ
Sequences:
>Translated_168_residues MTKIWTRDGFAENDPWVIETEEVKATGEQKPVLPLADFLVRAAESNDIGLGVLISPADDVNRLEPYLDRIDLVAVSFPAF NDGRGFSHASLLRSRLGFAGEVRAVGDVLIDQVPLMLRTGFTSFAVTNETAIRRLSENRLPEITVYYQPTALPATGGEAY SWRRRAAQ >Mature_167_residues TKIWTRDGFAENDPWVIETEEVKATGEQKPVLPLADFLVRAAESNDIGLGVLISPADDVNRLEPYLDRIDLVAVSFPAFN DGRGFSHASLLRSRLGFAGEVRAVGDVLIDQVPLMLRTGFTSFAVTNETAIRRLSENRLPEITVYYQPTALPATGGEAYS WRRRAAQ
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18594; Mature: 18463
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIWTRDGFAENDPWVIETEEVKATGEQKPVLPLADFLVRAAESNDIGLGVLISPADDV CCEECCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHH NRLEPYLDRIDLVAVSFPAFNDGRGFSHASLLRSRLGFAGEVRAVGDVLIDQVPLMLRTG HHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC FTSFAVTNETAIRRLSENRLPEITVYYQPTALPATGGEAYSWRRRAAQ CCCEEEECHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure TKIWTRDGFAENDPWVIETEEVKATGEQKPVLPLADFLVRAAESNDIGLGVLISPADDV CEECCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHH NRLEPYLDRIDLVAVSFPAFNDGRGFSHASLLRSRLGFAGEVRAVGDVLIDQVPLMLRTG HHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC FTSFAVTNETAIRRLSENRLPEITVYYQPTALPATGGEAYSWRRRAAQ CCCEEEECHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA