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The map label for this gene is omp1 [H]

Identifier: 15888707

GI number: 15888707

Start: 1374514

End: 1376838

Strand: Direct

Name: omp1 [H]

Synonym: Atu1381

Alternate gene names: 15888707

Gene position: 1374514-1376838 (Clockwise)

Preceding gene: 159184739

Following gene: 15888708

Centisome position: 48.37

GC content: 56.6

Gene sequence:

>2325_bases
ATGAAGGCTGGTTCAAGATTTTTGAACGCTGTGTCGGCGGTTGCTCTGTCTGCCGGTGTTTCTTCGGTTGCGGGCCTTGG
CGTGCTTGCCTCTGCTGGCGTTGCAAATGCAGCCGTCATCAGCAAGATTGACGTTCGCGGGGCCGAACGGTCCGGTGCGG
ACTCCGTGCGCTCCAACATCACCATTGCGCCGGGTAAGAATTTTTCCAATTCCGACATCGATGAATCGGTGAAGCGTCTT
TACGCCACCGGTTACTTCTCGAATGTCTCCATGCGCGTTTCCGGCAGCACGCTGGTCGTGACGGTCAATGAGAACCAGCT
TGTCAACCAGGTTGTCTTCAACGGTAACCGCAAGATCAAGGACGACAAGCTCGCCGGCATCGTGCAGACCCAGCCGATGG
GCCCGTTCAACCAGGCAATCGTGACGGCGGATATCGCCCGCATCAAGGAAGCCTATTCCGCTATCGGTCGCAGCGATGTG
GAAATCACCACGCAGACCGTGTCTGTCGGCCAAGGTCGTGTGAATATTGCTTTCGTCATCAACGAAGGTGAACGCACAAA
GATAGGCCGCATCGATTTCATCGGCAACAATTCCTATAGCGACGGTCGTCTGGCCGCTGTGATCAATACCAAGAAGTCCA
ACATGCTGTCGTTCCTGACACGCAAGGACGTCTATAACGAGGACAAGCTGCGCGCCGACGAAGAGGCGCTGCGCCAGTTC
TATTACAATCGCGGTTATGCCGACTTCCGGGTCGTGTCCTCCGACGCGGTGCTGGACGAGTCCAAAAACGAATACACCAT
CTCCATCACGGTCGACGAAGGCAAGAAGTATGACTTCGGCAACGTCGCAGTCGAATCGACTGTTCCGGGTGTTGACGGTT
CCGAACTTCAGGGCCTCGTGGAAACCCGCCAGGGTGCAAGCTACAGCGCCAAGGAAGTTCAGCAGAGCATGGAAGCGATT
TCCAAGCGCGTTGCCGGTGAAGGTTATCCCTTCGCCCGCGTTACGCCGCGCGGCGACCGTGATATGTCTGGCAACACCAT
TGGCGTGACCTACATCGTCGATCAGGGTGAGCGCGCTTACGTCGAGCGTATCGAAATCCGCGGCAACACCCGTACGCGTG
ATTACGTCATTCGCCGCGAATTCGATATTTCTGAAGGCGATGCGTTCAATCAGACGATCATCACCGCTGCAAAGCGCCGC
CTTGAAGCGCTCGGTTATTTCTCCAAGGTCAATATCTCGACCGCCGGCGGCAGCGCGCCTGACCGCGTCGTGATCGTGGT
CGACGTTGAAGACCAGTCGACCGGCTCGTTCGGTATCGGTGCGGGTTACTCGCAGAACGACGGCGTGCTGCTCGAGGCAT
CGGTCGAAGAAAAGAACTTCCTCGGTCGCGGCCAGTACATCCGTGTTGCTGCCGGTGCTGGCGAAGACGATGCGCGTACC
TACTCGCTGTCCTTTACCGAGCCCTATTTCCTCGGTTACCGTCTGGCGGCTGGTTTCGATCTCTTCAAAAACCAGAGCAA
GAGCGAAGACTATTACAACTACGACGAACAGGGTTTCGCACTGCGCGTAACAGCGCCGATCACCGAGAACCTGTCGACGA
CGTTCAAGTATACCTATAAGCAGATCAATTATGAAGGTAAGGGCGACTGGCAGAACAACGCCAATCTCGCAGAACCGTAT
CAGGCTCTGATCCGCGGTGAGGACTGGACCCAGTCCATCCTTTCGAACACGCTGAACTACAATACGCTCGATGACCGCAA
CATGCCGCGTGAAGGCTGGCAGGCTGCGTTGACGAACGAATTTGCAGGCCTCGGCGGTGATTCCGAATACTACAAAATCT
ATGCCAAGGCGCGGTACTACTACACGCTGTCCGACGAATACGATGTTATCGGTTCGCTCACCGGCCAGGCGGGTCATGTC
ATGCCGACAGGTGACAATCTGCTCGTCTTCGACCAGTTCAAGTTCGGCGGTCGTCAGGTTCGCGGCTTTAAGAACGATGG
TATCGGCCCGCGCATCGGTTCGGACTCCATCGGCGGCACGACATACTTCGCAGCGTCTGCGGAAGTCACCGCTCCGATGC
CTGGTGTTCCGGAAGACTTCGGCCTGCGTCTTGCTGGTTTCGTCGATGCCGGTACGATGTATGGCAACAAGGTCTCTACA
TCGCAGACCGTCAAGGATGACAACTCCATCCGTGCATCCGCCGGTATCGGTGTGATGTGGGCGTCGCCCTTCGGTCCGAT
CCGCGTTGACTACGCTATTCCGATTGCCAAGGAAGACTACGACGAGGAACAGCGTTTCCGGTTTGGCATGTCCAACACTT
TCTGA

Upstream 100 bases:

>100_bases
CGTTCACGCTTGCTTGTAGGGGAAAAGCAGGTAAAACGACGCACATGGCCGGAGTCGGGTTCCGCCCGCTGAGGGACAAC
GTAAAAAGGTAAGAATTGAA

Downstream 100 bases:

>100_bases
TATCGGCAGTCCAGAACTGCAACTTTGAACGTTCTGGAGTTTCCGGCTGATGGAATACAACGCATTTTTTCCGCCCCACG
AGGGACTGCGATTGAAAGAT

Product: group 1 outer membrane protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 774

Protein sequence:

>774_residues
MKAGSRFLNAVSAVALSAGVSSVAGLGVLASAGVANAAVISKIDVRGAERSGADSVRSNITIAPGKNFSNSDIDESVKRL
YATGYFSNVSMRVSGSTLVVTVNENQLVNQVVFNGNRKIKDDKLAGIVQTQPMGPFNQAIVTADIARIKEAYSAIGRSDV
EITTQTVSVGQGRVNIAFVINEGERTKIGRIDFIGNNSYSDGRLAAVINTKKSNMLSFLTRKDVYNEDKLRADEEALRQF
YYNRGYADFRVVSSDAVLDESKNEYTISITVDEGKKYDFGNVAVESTVPGVDGSELQGLVETRQGASYSAKEVQQSMEAI
SKRVAGEGYPFARVTPRGDRDMSGNTIGVTYIVDQGERAYVERIEIRGNTRTRDYVIRREFDISEGDAFNQTIITAAKRR
LEALGYFSKVNISTAGGSAPDRVVIVVDVEDQSTGSFGIGAGYSQNDGVLLEASVEEKNFLGRGQYIRVAAGAGEDDART
YSLSFTEPYFLGYRLAAGFDLFKNQSKSEDYYNYDEQGFALRVTAPITENLSTTFKYTYKQINYEGKGDWQNNANLAEPY
QALIRGEDWTQSILSNTLNYNTLDDRNMPREGWQAALTNEFAGLGGDSEYYKIYAKARYYYTLSDEYDVIGSLTGQAGHV
MPTGDNLLVFDQFKFGGRQVRGFKNDGIGPRIGSDSIGGTTYFAASAEVTAPMPGVPEDFGLRLAGFVDAGTMYGNKVST
SQTVKDDNSIRASAGIGVMWASPFGPIRVDYAIPIAKEDYDEEQRFRFGMSNTF

Sequences:

>Translated_774_residues
MKAGSRFLNAVSAVALSAGVSSVAGLGVLASAGVANAAVISKIDVRGAERSGADSVRSNITIAPGKNFSNSDIDESVKRL
YATGYFSNVSMRVSGSTLVVTVNENQLVNQVVFNGNRKIKDDKLAGIVQTQPMGPFNQAIVTADIARIKEAYSAIGRSDV
EITTQTVSVGQGRVNIAFVINEGERTKIGRIDFIGNNSYSDGRLAAVINTKKSNMLSFLTRKDVYNEDKLRADEEALRQF
YYNRGYADFRVVSSDAVLDESKNEYTISITVDEGKKYDFGNVAVESTVPGVDGSELQGLVETRQGASYSAKEVQQSMEAI
SKRVAGEGYPFARVTPRGDRDMSGNTIGVTYIVDQGERAYVERIEIRGNTRTRDYVIRREFDISEGDAFNQTIITAAKRR
LEALGYFSKVNISTAGGSAPDRVVIVVDVEDQSTGSFGIGAGYSQNDGVLLEASVEEKNFLGRGQYIRVAAGAGEDDART
YSLSFTEPYFLGYRLAAGFDLFKNQSKSEDYYNYDEQGFALRVTAPITENLSTTFKYTYKQINYEGKGDWQNNANLAEPY
QALIRGEDWTQSILSNTLNYNTLDDRNMPREGWQAALTNEFAGLGGDSEYYKIYAKARYYYTLSDEYDVIGSLTGQAGHV
MPTGDNLLVFDQFKFGGRQVRGFKNDGIGPRIGSDSIGGTTYFAASAEVTAPMPGVPEDFGLRLAGFVDAGTMYGNKVST
SQTVKDDNSIRASAGIGVMWASPFGPIRVDYAIPIAKEDYDEEQRFRFGMSNTF
>Mature_774_residues
MKAGSRFLNAVSAVALSAGVSSVAGLGVLASAGVANAAVISKIDVRGAERSGADSVRSNITIAPGKNFSNSDIDESVKRL
YATGYFSNVSMRVSGSTLVVTVNENQLVNQVVFNGNRKIKDDKLAGIVQTQPMGPFNQAIVTADIARIKEAYSAIGRSDV
EITTQTVSVGQGRVNIAFVINEGERTKIGRIDFIGNNSYSDGRLAAVINTKKSNMLSFLTRKDVYNEDKLRADEEALRQF
YYNRGYADFRVVSSDAVLDESKNEYTISITVDEGKKYDFGNVAVESTVPGVDGSELQGLVETRQGASYSAKEVQQSMEAI
SKRVAGEGYPFARVTPRGDRDMSGNTIGVTYIVDQGERAYVERIEIRGNTRTRDYVIRREFDISEGDAFNQTIITAAKRR
LEALGYFSKVNISTAGGSAPDRVVIVVDVEDQSTGSFGIGAGYSQNDGVLLEASVEEKNFLGRGQYIRVAAGAGEDDART
YSLSFTEPYFLGYRLAAGFDLFKNQSKSEDYYNYDEQGFALRVTAPITENLSTTFKYTYKQINYEGKGDWQNNANLAEPY
QALIRGEDWTQSILSNTLNYNTLDDRNMPREGWQAALTNEFAGLGGDSEYYKIYAKARYYYTLSDEYDVIGSLTGQAGHV
MPTGDNLLVFDQFKFGGRQVRGFKNDGIGPRIGSDSIGGTTYFAASAEVTAPMPGVPEDFGLRLAGFVDAGTMYGNKVST
SQTVKDDNSIRASAGIGVMWASPFGPIRVDYAIPIAKEDYDEEQRFRFGMSNTF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=817, Percent_Identity=27.2949816401469, Blast_Score=283, Evalue=3e-77,
Organism=Escherichia coli, GI1790666, Length=424, Percent_Identity=24.5283018867925, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 84548; Mature: 84548

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAGSRFLNAVSAVALSAGVSSVAGLGVLASAGVANAAVISKIDVRGAERSGADSVRSNI
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCHHHHCCE
TIAPGKNFSNSDIDESVKRLYATGYFSNVSMRVSGSTLVVTVNENQLVNQVVFNGNRKIK
EEECCCCCCCCCHHHHHHHHHHHCEECCEEEEEECCEEEEEECCCHHHHHHHCCCCCEEC
DDKLAGIVQTQPMGPFNQAIVTADIARIKEAYSAIGRSDVEITTQTVSVGQGRVNIAFVI
CCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEE
NEGERTKIGRIDFIGNNSYSDGRLAAVINTKKSNMLSFLTRKDVYNEDKLRADEEALRQF
ECCCCCEEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHCCCCHHHHHHH
YYNRGYADFRVVSSDAVLDESKNEYTISITVDEGKKYDFGNVAVESTVPGVDGSELQGLV
HHCCCCCEEEEEECCCEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHH
ETRQGASYSAKEVQQSMEAISKRVAGEGYPFARVTPRGDRDMSGNTIGVTYIVDQGERAY
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCEEE
VERIEIRGNTRTRDYVIRREFDISEGDAFNQTIITAAKRRLEALGYFSKVNISTAGGSAP
EEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCC
DRVVIVVDVEDQSTGSFGIGAGYSQNDGVLLEASVEEKNFLGRGQYIRVAAGAGEDDART
CEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCEE
YSLSFTEPYFLGYRLAAGFDLFKNQSKSEDYYNYDEQGFALRVTAPITENLSTTFKYTYK
EEEECCCCHHEEEEHHCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHEEEEEE
QINYEGKGDWQNNANLAEPYQALIRGEDWTQSILSNTLNYNTLDDRNMPREGWQAALTNE
EEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
FAGLGGDSEYYKIYAKARYYYTLSDEYDVIGSLTGQAGHVMPTGDNLLVFDQFKFGGRQV
HHCCCCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCCEEEECCCCEEEEECCCCCCEEE
RGFKNDGIGPRIGSDSIGGTTYFAASAEVTAPMPGVPEDFGLRLAGFVDAGTMYGNKVST
CCCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCHHHCEEEEEEEECCCCCCCCCCC
SQTVKDDNSIRASAGIGVMWASPFGPIRVDYAIPIAKEDYDEEQRFRFGMSNTF
CCCCCCCCCEEECCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MKAGSRFLNAVSAVALSAGVSSVAGLGVLASAGVANAAVISKIDVRGAERSGADSVRSNI
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCHHHHCCE
TIAPGKNFSNSDIDESVKRLYATGYFSNVSMRVSGSTLVVTVNENQLVNQVVFNGNRKIK
EEECCCCCCCCCHHHHHHHHHHHCEECCEEEEEECCEEEEEECCCHHHHHHHCCCCCEEC
DDKLAGIVQTQPMGPFNQAIVTADIARIKEAYSAIGRSDVEITTQTVSVGQGRVNIAFVI
CCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEE
NEGERTKIGRIDFIGNNSYSDGRLAAVINTKKSNMLSFLTRKDVYNEDKLRADEEALRQF
ECCCCCEEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHCCCCHHHHHHH
YYNRGYADFRVVSSDAVLDESKNEYTISITVDEGKKYDFGNVAVESTVPGVDGSELQGLV
HHCCCCCEEEEEECCCEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHH
ETRQGASYSAKEVQQSMEAISKRVAGEGYPFARVTPRGDRDMSGNTIGVTYIVDQGERAY
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCEEE
VERIEIRGNTRTRDYVIRREFDISEGDAFNQTIITAAKRRLEALGYFSKVNISTAGGSAP
EEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCC
DRVVIVVDVEDQSTGSFGIGAGYSQNDGVLLEASVEEKNFLGRGQYIRVAAGAGEDDART
CEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCEE
YSLSFTEPYFLGYRLAAGFDLFKNQSKSEDYYNYDEQGFALRVTAPITENLSTTFKYTYK
EEEECCCCHHEEEEHHCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHEEEEEE
QINYEGKGDWQNNANLAEPYQALIRGEDWTQSILSNTLNYNTLDDRNMPREGWQAALTNE
EEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
FAGLGGDSEYYKIYAKARYYYTLSDEYDVIGSLTGQAGHVMPTGDNLLVFDQFKFGGRQV
HHCCCCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCCEEEECCCCEEEEECCCCCCEEE
RGFKNDGIGPRIGSDSIGGTTYFAASAEVTAPMPGVPEDFGLRLAGFVDAGTMYGNKVST
CCCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCHHHCEEEEEEEECCCCCCCCCCC
SQTVKDDNSIRASAGIGVMWASPFGPIRVDYAIPIAKEDYDEEQRFRFGMSNTF
CCCCCCCCCEEECCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]