Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888677

Identifier: 15888677

GI number: 15888677

Start: 1345934

End: 1346560

Strand: Reverse

Name: 15888677

Synonym: Atu1351

Alternate gene names: NA

Gene position: 1346560-1345934 (Counterclockwise)

Preceding gene: 15888681

Following gene: 159184723

Centisome position: 47.39

GC content: 58.85

Gene sequence:

>627_bases
ATGACCAAATCATCAAGCGCTCTCTGCGCCGTTTTCGCAGGCGCATTGGCCCTTTCCCTGTCCGGACCGGCTTTTGCCGA
AACCATCGTCCGCAAGACCTATTCCTATTTTTCGGTCAGCGGCAAAACCGCAGCCGATCTTGACCAGCAGCTTTCCAAGC
ACGGCCCGCTGACCCGCAATACCGGCGCGCGCCATCCCGGTGCGACCGAAATCAAATTCGGCGGTGAGCTCACCTATGTC
GAAAAAAACGGCATGTGCAGCGTCGGCACGGCCAAGGTGCTCCTGAATACTCGCATTCTGCTGCCGCAGTGGAAAAACCG
CCGCCGCACCACGGCGGAACTGGCCTTCATCTGGGATACCCTGCTTGCCGACATCAAGCGCCATGAGGAACGCCACGCGG
AAATAGCCCGTACCCATGCCCGTTCGCTCGAAAGACAATTGACGTCGCTTCGTCCGCAGAAAAGCTGTGAAGTGCTGCAG
GGAATGGTCGGCAAGATCACCCAGACAGTGATGGACGAGCACGATCGCGACCAGATGCGCTTCGACGTGGTGGAATCGAA
AAACTTCGATGCCCGCATGACCCGGCTGTTAAAAAACCGGCTGGAACAGGGCCAGGCCCGCCGCTGA

Upstream 100 bases:

>100_bases
CACGCGCCTTTCGGGAATAACGGAGTGTTATGTCAATTCTTATAAGTTCCGCTCCGCCTATGCAGCAAACCTTTTTCAAG
TTCAACCGGAAGGCCGGGTC

Downstream 100 bases:

>100_bases
CGGTTGTTGGCAGCCCTTCCCAAATCTCGAGGAACAACAGGGACATGACGTAACGTCATGTCCGATATCACCCGTGAATT
CTCGTCATGGTGCGGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTKSSSALCAVFAGALALSLSGPAFAETIVRKTYSYFSVSGKTAADLDQQLSKHGPLTRNTGARHPGATEIKFGGELTYV
EKNGMCSVGTAKVLLNTRILLPQWKNRRRTTAELAFIWDTLLADIKRHEERHAEIARTHARSLERQLTSLRPQKSCEVLQ
GMVGKITQTVMDEHDRDQMRFDVVESKNFDARMTRLLKNRLEQGQARR

Sequences:

>Translated_208_residues
MTKSSSALCAVFAGALALSLSGPAFAETIVRKTYSYFSVSGKTAADLDQQLSKHGPLTRNTGARHPGATEIKFGGELTYV
EKNGMCSVGTAKVLLNTRILLPQWKNRRRTTAELAFIWDTLLADIKRHEERHAEIARTHARSLERQLTSLRPQKSCEVLQ
GMVGKITQTVMDEHDRDQMRFDVVESKNFDARMTRLLKNRLEQGQARR
>Mature_207_residues
TKSSSALCAVFAGALALSLSGPAFAETIVRKTYSYFSVSGKTAADLDQQLSKHGPLTRNTGARHPGATEIKFGGELTYVE
KNGMCSVGTAKVLLNTRILLPQWKNRRRTTAELAFIWDTLLADIKRHEERHAEIARTHARSLERQLTSLRPQKSCEVLQG
MVGKITQTVMDEHDRDQMRFDVVESKNFDARMTRLLKNRLEQGQARR

Specific function: Unknown

COG id: COG5661

COG function: function code O; Predicted secreted Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23360; Mature: 23229

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSSSALCAVFAGALALSLSGPAFAETIVRKTYSYFSVSGKTAADLDQQLSKHGPLTRN
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
TGARHPGATEIKFGGELTYVEKNGMCSVGTAKVLLNTRILLPQWKNRRRTTAELAFIWDT
CCCCCCCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHH
LLADIKRHEERHAEIARTHARSLERQLTSLRPQKSCEVLQGMVGKITQTVMDEHDRDQMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FDVVESKNFDARMTRLLKNRLEQGQARR
HHHHHCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TKSSSALCAVFAGALALSLSGPAFAETIVRKTYSYFSVSGKTAADLDQQLSKHGPLTRN
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
TGARHPGATEIKFGGELTYVEKNGMCSVGTAKVLLNTRILLPQWKNRRRTTAELAFIWDT
CCCCCCCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHH
LLADIKRHEERHAEIARTHARSLERQLTSLRPQKSCEVLQGMVGKITQTVMDEHDRDQMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FDVVESKNFDARMTRLLKNRLEQGQARR
HHHHHCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA