Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15888662
Identifier: 15888662
GI number: 15888662
Start: 1322490
End: 1322855
Strand: Direct
Name: 15888662
Synonym: Atu1337
Alternate gene names: NA
Gene position: 1322490-1322855 (Clockwise)
Preceding gene: 15888661
Following gene: 159184718
Centisome position: 46.54
GC content: 57.38
Gene sequence:
>366_bases ATGATCGCCGTCATCTTCGAGGTCTGGCCGGCTGAGGGTGAAAAACAGCATTATCTCGATATAGCTGCCGGCCTGCGTGC CGAACTCGAAACAATCGATGGTTTCCTGTCCATCGAAAGGTTTCAGAGTATCAGCAATCCGGAAAAGATGCTCTCCCTGT CCTTCTTCCGGGATGAACAGGCGGTGAGGGCGTGGCGCAACACCCTGCCACATCGCACGGCGCAAGCTCTGGGCCGATCC GGCGTCTTTTCCGACTATCGGTTGCGTATTGCACATGTCATTCGCGATTATGGCTTGTTGGAACGGGAAGAAGCGCCAGC CGACAGCCGGGACGCCCATCCGGTAGAGGGGAGCAGCTTGGGCTGA
Upstream 100 bases:
>100_bases GGCGGGAAAACTATGAATTCGCCCGCCGGGAACAGTTCATCCGCCGCGAGGACCGTCTGTTCCTCCGCCTCGCCTCCGCC CCGCAGACGGGAGGCGGGCA
Downstream 100 bases:
>100_bases TATTCCCAGCATCAGTTTTTCTGCATGCCGCTGTAAGGCTTTCTGGTTCGAACTCGTCTTTGAAACCCGTTATAGATGGG TCAATGTGGTGCAGGACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Monooxygenase; Antibiotic Biosynthesis Monooxygenase Domain Protein; Extracellular Polysaccharide Biosynthesis Protein; Antibiotic Biosynthesis Monooxygenase Family
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MIAVIFEVWPAEGEKQHYLDIAAGLRAELETIDGFLSIERFQSISNPEKMLSLSFFRDEQAVRAWRNTLPHRTAQALGRS GVFSDYRLRIAHVIRDYGLLEREEAPADSRDAHPVEGSSLG
Sequences:
>Translated_121_residues MIAVIFEVWPAEGEKQHYLDIAAGLRAELETIDGFLSIERFQSISNPEKMLSLSFFRDEQAVRAWRNTLPHRTAQALGRS GVFSDYRLRIAHVIRDYGLLEREEAPADSRDAHPVEGSSLG >Mature_121_residues MIAVIFEVWPAEGEKQHYLDIAAGLRAELETIDGFLSIERFQSISNPEKMLSLSFFRDEQAVRAWRNTLPHRTAQALGRS GVFSDYRLRIAHVIRDYGLLEREEAPADSRDAHPVEGSSLG
Specific function: Unknown
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13699; Mature: 13699
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVIFEVWPAEGEKQHYLDIAAGLRAELETIDGFLSIERFQSISNPEKMLSLSFFRDEQ CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AVRAWRNTLPHRTAQALGRSGVFSDYRLRIAHVIRDYGLLEREEAPADSRDAHPVEGSSL HHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC G C >Mature Secondary Structure MIAVIFEVWPAEGEKQHYLDIAAGLRAELETIDGFLSIERFQSISNPEKMLSLSFFRDEQ CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AVRAWRNTLPHRTAQALGRSGVFSDYRLRIAHVIRDYGLLEREEAPADSRDAHPVEGSSL HHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA