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The map label for this gene is yccU [H]

Identifier: 15888580

GI number: 15888580

Start: 1238961

End: 1239395

Strand: Direct

Name: yccU [H]

Synonym: Atu1250

Alternate gene names: 15888580

Gene position: 1238961-1239395 (Clockwise)

Preceding gene: 15888573

Following gene: 15888581

Centisome position: 43.6

GC content: 57.01

Gene sequence:

>435_bases
ATGCAGCATGATACTTACGAGCCCGACTATCTCAGAAAAATTCTGACTGACGTCAAAACCATCGCCCTGCTCGGTGCTTC
ACCCAATCCCGACAGGCCGAGCCACGGCGTGATGCGCTTTCTGCTGTCCAAGGGGTATCGCGTGTTTCCGGTCAATCCCG
GCCAGGCGGGCAAGGAGATATTAGGGCAGAAGGTCTATGCCAGGCTTGCCGATATCCCTGAGGCGATCGACATGATCGAT
GTTTTCCGCGCGCCGGAATATTTGTCGGCCATTGTCGAAGAGGCGATATTGCTGCCCGACCGACCATCGGTGATCTGGGG
CCAGCTTTCGGTTCGTGACGACAATGCCGCCGCCAAGGCGGAAGCCTATGGCATGGACGTGGTGATGGACCGTTGCCCGG
CAATTGAGTATCCGCGTCTCAATATTGCGCGATAG

Upstream 100 bases:

>100_bases
CGAAATCATGCAGGAGACGCTATCCTGGCGGGGCTTTCGGATGGCGAACTTGCGCTGGCATTCTTCAAACCAGGTGACGT
TCCAGAAGGGATAAGTTGAC

Downstream 100 bases:

>100_bases
TTGGTACGGATTGCACTTATCATTTGACGCCAAGGCATTATGATCCCTCCAAAATTCCAATGGAGGAAACATAATGTCGA
GCAACAATCCCGGATTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MQHDTYEPDYLRKILTDVKTIALLGASPNPDRPSHGVMRFLLSKGYRVFPVNPGQAGKEILGQKVYARLADIPEAIDMID
VFRAPEYLSAIVEEAILLPDRPSVIWGQLSVRDDNAAAKAEAYGMDVVMDRCPAIEYPRLNIAR

Sequences:

>Translated_144_residues
MQHDTYEPDYLRKILTDVKTIALLGASPNPDRPSHGVMRFLLSKGYRVFPVNPGQAGKEILGQKVYARLADIPEAIDMID
VFRAPEYLSAIVEEAILLPDRPSVIWGQLSVRDDNAAAKAEAYGMDVVMDRCPAIEYPRLNIAR
>Mature_144_residues
MQHDTYEPDYLRKILTDVKTIALLGASPNPDRPSHGVMRFLLSKGYRVFPVNPGQAGKEILGQKVYARLADIPEAIDMID
VFRAPEYLSAIVEEAILLPDRPSVIWGQLSVRDDNAAAKAEAYGMDVVMDRCPAIEYPRLNIAR

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081810, Length=131, Percent_Identity=53.4351145038168, Blast_Score=141, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 16083; Mature: 16083

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHDTYEPDYLRKILTDVKTIALLGASPNPDRPSHGVMRFLLSKGYRVFPVNPGQAGKEI
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH
LGQKVYARLADIPEAIDMIDVFRAPEYLSAIVEEAILLPDRPSVIWGQLSVRDDNAAAKA
HHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHH
EAYGMDVVMDRCPAIEYPRLNIAR
HHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQHDTYEPDYLRKILTDVKTIALLGASPNPDRPSHGVMRFLLSKGYRVFPVNPGQAGKEI
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH
LGQKVYARLADIPEAIDMIDVFRAPEYLSAIVEEAILLPDRPSVIWGQLSVRDDNAAAKA
HHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHH
EAYGMDVVMDRCPAIEYPRLNIAR
HHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 9868784 [H]