Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is exoP [H]
Identifier: 15888570
GI number: 15888570
Start: 1228032
End: 1230293
Strand: Direct
Name: exoP [H]
Synonym: Atu1239
Alternate gene names: 15888570
Gene position: 1228032-1230293 (Clockwise)
Preceding gene: 159184678
Following gene: 15888573
Centisome position: 43.22
GC content: 62.73
Gene sequence:
>2262_bases ATGAACGGCGATCGTATTGACGACAGGGATGTGGATATCGACCTTGCGCAACTTGTTGCGGCGATATGGCGACGCAGGGG GCGGATCGCGGCGATCACCCTTCTCTCCGGAGGCGCCGCCTTTGTGGCTGCCAGCATGATGTCGCCTGCCTATAAGGGCG AGGCGCGCGTGCTCATCGAATCCCGTGCGGCCTCTTTCGGCGCGTCGCAGCAGTCAAATGCGCCCGCCGAACCCGTGCTC GATGAATTGACCGTTTCCAGCCAGGTGCAGATCCTGCAATCGGTCGACCTCATCAAGCAGGTCGCGAAAGACATGAAGCT TTATGAGCTTGATGAGTTCGATCCCGAAGCCCATCCTTCCTTCGTCTCGCAGCTACTGGTCGGGGTCGGTCTCAAAAAGG ATCCGCTGCAGGTGCTGCCCGAGGAGCGTGTCTTGACGGCTTTCCGGGAGAAGCTGCAGGTCTATCAGGTCGAAAGCTCG CGCGTCATCACGGTCGAATTCTCCTCGAAGGATCCGAAGCTCGCCGCCGCCATCCCCAATGAGATGATGAAGGCCTATAT TGCGTTGCAGAGCGGCGCGAAGCTGGGCACCAGCACAGAAGCGGCACGCTGGCTGGAGCCGGAAATCGCCAGTCTGCGCG AGAAGGTGCGCGATGCGGACAGAAAAGTCGCGGATTATCGCGCCTCGTCCGACCTTCTCTCGGCTGGGCAGGGCGAAACG CTCGCCACCCGCCAGCTCAGCGATATCTCTACCGAACTCGGCCGTATCCGTGGCGAGCGCGCCAATGCGGAAGCCCGGGC CGAAGGCGTGCGTAATGCGCTGGCAAGCGGCCGCGCGCTCGATACCTTCCCCGATGTCGTTGCCTCCCCGACGATCCAGA GGCTGAAGGAAAACGAAACGTCGATCCGCAGCCAGATTTCCGATCTCACCTCCTCGTTGCTGGAAGGCCATCCGCGCATC AGGGCGCTGCGCAACCAGCTTGCCGGCATAGAGCGGCAGATTCAGGAAGAGACCCGCAAGGTACTCGCAAGCCTTGAAAA CGAGGCAAACCTATCGCGCCTGCGCGAGCGGCAACTCGTTCAGCAACTGAACGTGCTGAAATCGGAAAGCGTGCGCGCCG GCGAACAGCAGGTGGGCCTCAACGATCTCGAGCGCGAGGCCTCGGCCCAGCGGCAGCTCCTCGAAACCTATCTCGCCCGT TATCGCGAAGCGACGTCGCGGGCAGGTTCGGTGGATTCCACGCCGGCCGATGCGCGTGTCATTTCGGCGGCGGTTGAGCC GCGCGAACCCTATTTCCCGAAAACCGGCGCCATCACCATCGTCGTGACGCTCGCAGCCTTTCTGCTCTCCTGTATTGTCG TCATGCTGGTGGAACTCTTCACCGGCCGGGCTCTGAAGCCAGTGGGCCGGAGCCAGGTTCCGCCGCTCTCCGATCCGCCA CCGACACGCGCGCGGGTCGAGACGGATGGGGCCACGGATGTGCCGGAACAGCCCGTTACTGCGCGTCACGAGGCAATCCA GCCAGCTCCCCAGGCCATTCCGGTCGCGGCGCACCATAAGGTCGCCGAGGAGGAGCGGCAGATGCCCGTCGCGGCCATGG CTGCGATACCGGCCTTGCCAAAAGAAGAGGTGGTTACAGCTCAAGAGGTGGCGGCAGAAGAGGACGTCGACACGTCAGAC GATTTTTCGATCGATGCCGTTGCGGGTTTCCTGACCACGCGGCTTGCCAAACCGGTCGCCGCCGTCGTGTCCCCGGCCGG TGATAGCGGTTCAACCTCAACCGTGATGCTGGCGCGCGCCTTGTCCGAAATGGGCCGATCGGTCGTTCTCGTCGATATGA CGGCGTCCGGTTGTCCGACGCGGCTGATGGCACCCGAAGCCGGGCTTCCCGGTGTCATGGACCTTCTGGCCGGTGCGGCC GCCTTTGGTGAAACCATTCACGGAGACCGCCTGTCCGACGCCCATATCGTACCGCGCGGCAATGCCCAGCCGCGTGAGGC CATGCGCGCCATAGACCGCCTGACGATGATCCTCAGCGCGTTGTCGGACGCCTACGATACGGTTCTCGTCGAATGCGGCG CGGTACAGATTGCGAGTCTTGAGAAAATGCTGCGCAATCTGCCGGCGGAAATCATCGTTTCCGTTCCCGGCCGGGATGGT GAGATGCTGGAAAAGACGCTCGATGACCTGGTAGCACAGGGCTATAAGCAGGCGTTACCGATGACGGGTATGCGCAAGCC GGATCATCTGAGCGCCGCCTGA
Upstream 100 bases:
>100_bases CTCCGAGATTAACGGTTGTGTTACCGGCAAGACTTAAACTTCGCGAAAATTGGCCATCTATATTTGAGCGCCCGAGGTTT GTCTCGGTTACGGAGCTTGC
Downstream 100 bases:
>100_bases CTGGCCGCGAAACCCCGCTCAGTCGGCGGCCGAGGCTTCCGCTCTTGGCCGTCCGGCGCGAAAACGCTGGATCAATGCAT AAAGCGCCGGATTGGATTTG
Product: exopolysaccharide production protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 753; Mature: 753
Protein sequence:
>753_residues MNGDRIDDRDVDIDLAQLVAAIWRRRGRIAAITLLSGGAAFVAASMMSPAYKGEARVLIESRAASFGASQQSNAPAEPVL DELTVSSQVQILQSVDLIKQVAKDMKLYELDEFDPEAHPSFVSQLLVGVGLKKDPLQVLPEERVLTAFREKLQVYQVESS RVITVEFSSKDPKLAAAIPNEMMKAYIALQSGAKLGTSTEAARWLEPEIASLREKVRDADRKVADYRASSDLLSAGQGET LATRQLSDISTELGRIRGERANAEARAEGVRNALASGRALDTFPDVVASPTIQRLKENETSIRSQISDLTSSLLEGHPRI RALRNQLAGIERQIQEETRKVLASLENEANLSRLRERQLVQQLNVLKSESVRAGEQQVGLNDLEREASAQRQLLETYLAR YREATSRAGSVDSTPADARVISAAVEPREPYFPKTGAITIVVTLAAFLLSCIVVMLVELFTGRALKPVGRSQVPPLSDPP PTRARVETDGATDVPEQPVTARHEAIQPAPQAIPVAAHHKVAEEERQMPVAAMAAIPALPKEEVVTAQEVAAEEDVDTSD DFSIDAVAGFLTTRLAKPVAAVVSPAGDSGSTSTVMLARALSEMGRSVVLVDMTASGCPTRLMAPEAGLPGVMDLLAGAA AFGETIHGDRLSDAHIVPRGNAQPREAMRAIDRLTMILSALSDAYDTVLVECGAVQIASLEKMLRNLPAEIIVSVPGRDG EMLEKTLDDLVAQGYKQALPMTGMRKPDHLSAA
Sequences:
>Translated_753_residues MNGDRIDDRDVDIDLAQLVAAIWRRRGRIAAITLLSGGAAFVAASMMSPAYKGEARVLIESRAASFGASQQSNAPAEPVL DELTVSSQVQILQSVDLIKQVAKDMKLYELDEFDPEAHPSFVSQLLVGVGLKKDPLQVLPEERVLTAFREKLQVYQVESS RVITVEFSSKDPKLAAAIPNEMMKAYIALQSGAKLGTSTEAARWLEPEIASLREKVRDADRKVADYRASSDLLSAGQGET LATRQLSDISTELGRIRGERANAEARAEGVRNALASGRALDTFPDVVASPTIQRLKENETSIRSQISDLTSSLLEGHPRI RALRNQLAGIERQIQEETRKVLASLENEANLSRLRERQLVQQLNVLKSESVRAGEQQVGLNDLEREASAQRQLLETYLAR YREATSRAGSVDSTPADARVISAAVEPREPYFPKTGAITIVVTLAAFLLSCIVVMLVELFTGRALKPVGRSQVPPLSDPP PTRARVETDGATDVPEQPVTARHEAIQPAPQAIPVAAHHKVAEEERQMPVAAMAAIPALPKEEVVTAQEVAAEEDVDTSD DFSIDAVAGFLTTRLAKPVAAVVSPAGDSGSTSTVMLARALSEMGRSVVLVDMTASGCPTRLMAPEAGLPGVMDLLAGAA AFGETIHGDRLSDAHIVPRGNAQPREAMRAIDRLTMILSALSDAYDTVLVECGAVQIASLEKMLRNLPAEIIVSVPGRDG EMLEKTLDDLVAQGYKQALPMTGMRKPDHLSAA >Mature_753_residues MNGDRIDDRDVDIDLAQLVAAIWRRRGRIAAITLLSGGAAFVAASMMSPAYKGEARVLIESRAASFGASQQSNAPAEPVL DELTVSSQVQILQSVDLIKQVAKDMKLYELDEFDPEAHPSFVSQLLVGVGLKKDPLQVLPEERVLTAFREKLQVYQVESS RVITVEFSSKDPKLAAAIPNEMMKAYIALQSGAKLGTSTEAARWLEPEIASLREKVRDADRKVADYRASSDLLSAGQGET LATRQLSDISTELGRIRGERANAEARAEGVRNALASGRALDTFPDVVASPTIQRLKENETSIRSQISDLTSSLLEGHPRI RALRNQLAGIERQIQEETRKVLASLENEANLSRLRERQLVQQLNVLKSESVRAGEQQVGLNDLEREASAQRQLLETYLAR YREATSRAGSVDSTPADARVISAAVEPREPYFPKTGAITIVVTLAAFLLSCIVVMLVELFTGRALKPVGRSQVPPLSDPP PTRARVETDGATDVPEQPVTARHEAIQPAPQAIPVAAHHKVAEEERQMPVAAMAAIPALPKEEVVTAQEVAAEEDVDTSD DFSIDAVAGFLTTRLAKPVAAVVSPAGDSGSTSTVMLARALSEMGRSVVLVDMTASGCPTRLMAPEAGLPGVMDLLAGAA AFGETIHGDRLSDAHIVPRGNAQPREAMRAIDRLTMILSALSDAYDTVLVECGAVQIASLEKMLRNLPAEIIVSVPGRDG EMLEKTLDDLVAQGYKQALPMTGMRKPDHLSAA
Specific function: Unknown
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.solanacearum epsB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: NA
Molecular weight: Translated: 81127; Mature: 81127
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGDRIDDRDVDIDLAQLVAAIWRRRGRIAAITLLSGGAAFVAASMMSPAYKGEARVLIE CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEE SRAASFGASQQSNAPAEPVLDELTVSSQVQILQSVDLIKQVAKDMKLYELDEFDPEAHPS HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH FVSQLLVGVGLKKDPLQVLPEERVLTAFREKLQVYQVESSRVITVEFSSKDPKLAAAIPN HHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCHHHHHH EMMKAYIALQSGAKLGTSTEAARWLEPEIASLREKVRDADRKVADYRASSDLLSAGQGET HHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH LATRQLSDISTELGRIRGERANAEARAEGVRNALASGRALDTFPDVVASPTIQRLKENET HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHH SIRSQISDLTSSLLEGHPRIRALRNQLAGIERQIQEETRKVLASLENEANLSRLRERQLV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH QQLNVLKSESVRAGEQQVGLNDLEREASAQRQLLETYLARYREATSRAGSVDSTPADARV HHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH ISAAVEPREPYFPKTGAITIVVTLAAFLLSCIVVMLVELFTGRALKPVGRSQVPPLSDPP HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PTRARVETDGATDVPEQPVTARHEAIQPAPQAIPVAAHHKVAEEERQMPVAAMAAIPALP CCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC KEEVVTAQEVAAEEDVDTSDDFSIDAVAGFLTTRLAKPVAAVVSPAGDSGSTSTVMLARA HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LSEMGRSVVLVDMTASGCPTRLMAPEAGLPGVMDLLAGAAAFGETIHGDRLSDAHIVPRG HHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCC NAQPREAMRAIDRLTMILSALSDAYDTVLVECGAVQIASLEKMLRNLPAEIIVSVPGRDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCH EMLEKTLDDLVAQGYKQALPMTGMRKPDHLSAA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNGDRIDDRDVDIDLAQLVAAIWRRRGRIAAITLLSGGAAFVAASMMSPAYKGEARVLIE CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEE SRAASFGASQQSNAPAEPVLDELTVSSQVQILQSVDLIKQVAKDMKLYELDEFDPEAHPS HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH FVSQLLVGVGLKKDPLQVLPEERVLTAFREKLQVYQVESSRVITVEFSSKDPKLAAAIPN HHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCHHHHHH EMMKAYIALQSGAKLGTSTEAARWLEPEIASLREKVRDADRKVADYRASSDLLSAGQGET HHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH LATRQLSDISTELGRIRGERANAEARAEGVRNALASGRALDTFPDVVASPTIQRLKENET HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHH SIRSQISDLTSSLLEGHPRIRALRNQLAGIERQIQEETRKVLASLENEANLSRLRERQLV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH QQLNVLKSESVRAGEQQVGLNDLEREASAQRQLLETYLARYREATSRAGSVDSTPADARV HHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH ISAAVEPREPYFPKTGAITIVVTLAAFLLSCIVVMLVELFTGRALKPVGRSQVPPLSDPP HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PTRARVETDGATDVPEQPVTARHEAIQPAPQAIPVAAHHKVAEEERQMPVAAMAAIPALP CCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC KEEVVTAQEVAAEEDVDTSDDFSIDAVAGFLTTRLAKPVAAVVSPAGDSGSTSTVMLARA HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LSEMGRSVVLVDMTASGCPTRLMAPEAGLPGVMDLLAGAAAFGETIHGDRLSDAHIVPRG HHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCC NAQPREAMRAIDRLTMILSALSDAYDTVLVECGAVQIASLEKMLRNLPAEIIVSVPGRDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCH EMLEKTLDDLVAQGYKQALPMTGMRKPDHLSAA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]