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The map label for this gene is ropB [H]

Identifier: 15888468

GI number: 15888468

Start: 1120603

End: 1121259

Strand: Direct

Name: ropB [H]

Synonym: Atu1131

Alternate gene names: 15888468

Gene position: 1120603-1121259 (Clockwise)

Preceding gene: 159184625

Following gene: 15888471

Centisome position: 39.44

GC content: 60.43

Gene sequence:

>657_bases
ATGCGTATTTTCGTAGCAACCCTTATGGCTTCGACCATGGCAGCCGCCGGTTTTTCGGCTGCTTACGCCGCCGACGCCGT
AAATGAGGTGCCGCAGGCACCGGTAGCCTACGACCAGCCCGCCGCGGTCAAGGATTGGTCCGGCGCCTACCTCGGTGGTA
CGGTCAACTATGACTGGGGCCGTTTCAGCTCCAGCAATGACGGTCGTGACGCCAAGGGCTTCGGTGGCGGCGTCTATGGT
GGTTACAACATGCAGAGCGGCCAGATCGTTTACGGTGCTGAAGCAGACGTGAACATGGGCGACGAGAAGGGCTCCGCCGG
TACGGTTGCCGGTCGCGCCGTCGAAGGCAAGCAGGGCGTCAACGGCTCGCTGCGTGGCCGCGTCGGTTACGACATGAACC
CGTTCCTGCTTTATGGTACGGCCGGTCTTGCTGTCTCCGACAACAAGGTTCGTGACGGCGTCAACAAGGACAGCGCCACG
GCTCTCGGTTACACGGTTGGTGCCGGTGTTGAAGCCATGGTGACCGACAACATCACCGCTCGTCTGGAATATCGCTACAG
CGATTACCAGAAGAAGGACTACACGCTCGGCAACGATGCCTTCTCGCGTGGTTTTGACGACCACTCGGTCAAGGCCGGTA
TCGGCGTCAAGTTCTGA

Upstream 100 bases:

>100_bases
CCATCAAGTTCAGTTTCCAGAGGGGCAAATTAACCCGACGATTTTTACCGCGTCTGAAAACAATGTTTTGAGTGCAGAGC
GGTCCTGAAAGGAGAATAAC

Downstream 100 bases:

>100_bases
TCCTTCTCGGATCGGTCAAGGAAAAGCCGGGGTTTACGCCCCGGCTTTTTTTTGTTTCTGTGATTTGCCATCGCCTTAAC
GCCCGGTGGAAAGAACCGGG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRIFVATLMASTMAAAGFSAAYAADAVNEVPQAPVAYDQPAAVKDWSGAYLGGTVNYDWGRFSSSNDGRDAKGFGGGVYG
GYNMQSGQIVYGAEADVNMGDEKGSAGTVAGRAVEGKQGVNGSLRGRVGYDMNPFLLYGTAGLAVSDNKVRDGVNKDSAT
ALGYTVGAGVEAMVTDNITARLEYRYSDYQKKDYTLGNDAFSRGFDDHSVKAGIGVKF

Sequences:

>Translated_218_residues
MRIFVATLMASTMAAAGFSAAYAADAVNEVPQAPVAYDQPAAVKDWSGAYLGGTVNYDWGRFSSSNDGRDAKGFGGGVYG
GYNMQSGQIVYGAEADVNMGDEKGSAGTVAGRAVEGKQGVNGSLRGRVGYDMNPFLLYGTAGLAVSDNKVRDGVNKDSAT
ALGYTVGAGVEAMVTDNITARLEYRYSDYQKKDYTLGNDAFSRGFDDHSVKAGIGVKF
>Mature_218_residues
MRIFVATLMASTMAAAGFSAAYAADAVNEVPQAPVAYDQPAAVKDWSGAYLGGTVNYDWGRFSSSNDGRDAKGFGGGVYG
GYNMQSGQIVYGAEADVNMGDEKGSAGTVAGRAVEGKQGVNGSLRGRVGYDMNPFLLYGTAGLAVSDNKVRDGVNKDSAT
ALGYTVGAGVEAMVTDNITARLEYRYSDYQKKDYTLGNDAFSRGFDDHSVKAGIGVKF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 22808; Mature: 22808

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFVATLMASTMAAAGFSAAYAADAVNEVPQAPVAYDQPAAVKDWSGAYLGGTVNYDWG
CEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEECCCC
RFSSSNDGRDAKGFGGGVYGGYNMQSGQIVYGAEADVNMGDEKGSAGTVAGRAVEGKQGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECEEECCCCCC
NGSLRGRVGYDMNPFLLYGTAGLAVSDNKVRDGVNKDSATALGYTVGAGVEAMVTDNITA
CCCCCEEECCCCCCEEEEECCCEEECCCHHHCCCCCCCCEEEEEEECCCEEEEEECCEEE
RLEYRYSDYQKKDYTLGNDAFSRGFDDHSVKAGIGVKF
EEEEECCCCCCCCCCCCCHHHHCCCCCCCEECCCCCCC
>Mature Secondary Structure
MRIFVATLMASTMAAAGFSAAYAADAVNEVPQAPVAYDQPAAVKDWSGAYLGGTVNYDWG
CEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEECCCC
RFSSSNDGRDAKGFGGGVYGGYNMQSGQIVYGAEADVNMGDEKGSAGTVAGRAVEGKQGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECEEECCCCCC
NGSLRGRVGYDMNPFLLYGTAGLAVSDNKVRDGVNKDSATALGYTVGAGVEAMVTDNITA
CCCCCEEECCCCCCEEEEECCCEEECCCHHHCCCCCCCCEEEEEEECCCEEEEEECCEEE
RLEYRYSDYQKKDYTLGNDAFSRGFDDHSVKAGIGVKF
EEEEECCCCCCCCCCCCCHHHHCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8589412 [H]